Trichoplusia ni (cabbage looper): 113496972
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Entry
113496972 CDS
T05757
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113496972
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
113496972
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GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Dehydrin
Motif
Other DBs
NCBI-GeneID:
113496972
NCBI-ProteinID:
XP_026732186
UniProt:
A0A7E5VVN6
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Position
8:14571143..14580546
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AA seq
868 aa
AA seq
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MADSDDEYDRKRRDKFRGERGAAEGSSYRNSDRREDRSRGREEWSERSRGGRSGPDYRDY
RGGASASRGYSPVRGEGPPSKRIRPDWPIDERRYGGMPHDSYGYGWPHDHFGPHPAHQGY
GQPMPPVPARDTVLPLGATDGPPTMMSFKAFLAAQDDSITVDDAIQKYNEYKLEFRRQQL
NEFFVAHKDEEWFKIKYHPEESVKRKEEQLGALKNRLNVFLELLEKGELDKVSVDIDKSD
KLIRLLDTVVIKLEGGTEEDLKELDEPPQQEVVNSNDKADKIDADKPVVIDVDDVNVKEE
KEEEDKKEKKSESPKPTAPLTMEIDPHLRQLQEQAKLFSRFNSTGTESGEQGEVEEKEPP
PPGSSSSSSSSSSSSSSSEDEGEVNNRRKSKSKSKTPPPDKSPKNKEKSKSPSVEKTVEK
TNDKEKDKSGDEKAESVSDVVIEKKQCRALHKTTSIFLRNLAPTITKAEVEAMCKRYGGF
LRVALADPLPERRWFRRGWVTFRRDVNIKDICWNLNNIRLRECELGAIVNRDLNRRIRPV
SGITLERGVLRADARLAARLAHLLDTRSRLWQQDAPAPGDENFSLNSKNPVLHKITEHLI
EEASTEEEELLGLEASSESQQASEQPDPELIRVLDRLVLYLRIVHSVDYYNHCEYPYEDE
MPNRCGIMHARSGPPANKPTQQEIQDYVKTFEGKMSAFLQDVKPLSDEELHKLGIKDTDA
EVEKFILANTQELAKDKWLCPLSGKKFKGPDFIRKHIFNKHGEKVDEVRREVSYFNAYVR
DVRRPQQPEPAARAQPPPHAPPPAPYGGGPGGGAGGARGWGWGGWAPPAYAPRHPRFTRP
RGGGGGAEFRPMIHYRDLDAPREPDEFV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagtgatgatgaatatgatcgtaaaagacgagacaagtttcggggagaacga
ggtgccgctgaaggcagcagttaccgaaacagcgaccgacgcgaggacaggagtcgtggt
agagaagagtggtcggaaaggtcccgtggaggtcgctctggccctgactatagagattat
cgaggaggagcaagtgctagccgaggatactctcctgtcagaggagaaggtcctcctagc
aagcgcatcagaccagactggcctatagatgaaagaagatatggtgggatgcctcatgat
tcttatggctatggctggcctcatgatcacttcgggccccatcctgcacaccaaggctat
gggcaacctatgccccctgtaccagctagagacacagtgttgccattgggcgctaccgat
gggccacccaccatgatgtcgttcaaagcattcctggcggctcaagacgattccatcacc
gttgatgatgccatccagaagtacaatgaatacaagctcgagtttaggagacaacagctt
aatgagtttttcgttgctcacaaagatgaagaatggttcaagatcaaataccatcctgaa
gaatctgtgaaaagaaaagaagaacagttgggtgccttgaagaatcgactaaacgtattc
ctggagttgctggagaaaggggaacttgataaggtttctgttgatattgacaagtctgac
aagttgattagactgctggatacagtggtcataaaacttgagggtgggaccgaagaggac
ttgaaggaactggatgagcctccacaacaagaagttgttaattcgaatgataaagcagat
aagattgatgcagacaagcctgttgtcattgatgtagatgatgtgaatgtaaaagaagaa
aaagaggaggaggacaaaaaggagaaaaaatccgagtccccaaaaccgactgcgcctctt
actatggagattgatccccatttacgacaactccaagagcaggcaaaattgttctcccgg
ttcaactcgactggaactgagtctggcgagcagggagaggtagaagaaaaggaacccccg
ccgccagggtcgtcgtcaagttcatcatcttccagttcctcttcatccagttcagaagac
gagggagaagtaaacaatcggcgcaagtccaaatctaagtccaaaactccaccaccagac
aagtcacctaagaataaagagaaatccaagtccccgagtgttgagaaaactgttgagaag
accaacgataaagaaaaggataaaagtggtgatgagaaagccgaatcggtcagcgatgtg
gtaatcgagaagaaacaatgtcgcgcgttgcacaaaactacttccatattcttaagaaac
ttagctcctaccatcacgaaggccgaagttgaagctatgtgcaaacgctacggaggtttt
cttcgtgttgctcttgccgacccgctaccagaacgtcgttggtttcgccgtggctgggtc
accttccgtcgtgacgtcaacattaaagatatttgttggaatcttaacaatattaggctg
cgcgagtgcgagctgggcgccatagtgaaccgcgacctgaaccggcgcatccggccggtg
tcgggcatcacgctggagcgcggcgtgctgcgcgcggacgcgcggctggcggcgcgcctg
gcgcacctgctcgacacgcgctcccgtctgtggcagcaggacgcgcccgcgcccggggac
gagaactttagcctgaactcgaagaacccagtgctgcacaagatcacagagcatttaata
gaagaagcttcaactgaagaggaagagttgctaggactagaagcatcgtccgagtcacaa
caggcttctgagcaaccagatcccgaacttatccgcgttctagaccgcctagttctatac
ttacgtatagtacactccgttgattattacaatcattgcgagtatccttacgaggatgaa
atgcctaaccgctgcggtattatgcacgccaggtctggaccaccagcgaataagccgacc
cagcaggagatacaagactatgtgaaaacatttgaaggaaaaatgtctgccttcttacaa
gacgtcaagcctctttctgacgaagagctgcacaagctcggaataaaggatactgatgca
gaagtggaaaagttcatccttgctaatactcaagagcttgccaaagataaatggttgtgc
cctctgagtggcaagaagtttaagggaccagactttatacgaaagcacatttttaacaaa
catggtgaaaaggtggacgaggtccggcgcgaggtgtcgtacttcaacgcgtacgtgcgc
gacgtgcggcggccgcagcagcccgagcccgccgcgcgcgcgcagccgccgccgcacgcg
ccgccgcccgcgccgtacggaggcgggccgggcggcggcgcgggcggcgctcgcggctgg
ggctggggcggctgggccccgcccgcatacgcgcccaggcatccgcgcttcacacggccc
aggggcggcggcggcggcgccgaattccgtccgatgatacactaccgcgacttggatgcc
ccacgcgaacctgacgagttcgtttaa
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