Trichoplusia ni (cabbage looper): 113497367
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Entry
113497367 CDS
T05757
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113497367
04121 Ubiquitin system [BR:
tnl04121
]
113497367
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Other 90S particles
113497367
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113497367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD_LRWD1
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113497367
NCBI-ProteinID:
XP_026732707
UniProt:
A0A7E5VWP5
LinkDB
All DBs
Position
9:complement(5444041..5446061)
Genome browser
AA seq
447 aa
AA seq
DB search
MSKVKIKVISRNPDEYLRATKRDIHKLPRNYDPSLHPLEAPREYVRAMNAVKLERVFAKP
FIGNLDGHRDGVSSLAKHPSRLSVLTSGAFDGEIRQWDLAVKKCTRNFVAHEGWVRALCY
TPDGETFTSVGDDKTIKTWKSEVHSPDDEDPISTLLSMSVVSGITHHRNKPIFATCGEHC
QLWEKTRNEPVKVFKWGVDSLHHVSFNQVEHNLLASCASDRSVILYDCRESGPLRKVVME
LRSNALSWNPMEAFIFTVANEDYNLYTFDVRKLKQPVNIHMGHTSAVIDVDYAPTGRELV
AGSYDKTIRIFESLKGNSRDVYHTKRMQRLTCVKWTLDNKYILSGSDEMNIRMWKARASE
KLGVLKPRERTALNYADSLKEKFANHPQVKRIARHRHVPKHILNAQKEIKTIKDKSKRKE
GNRRAHSKPGSVPFVAERQKHIVKEDE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagttaaaataaaggttattagccgtaatccagacgaatatttacgcgctaca
aaacgggatatccacaaactgccaagaaactacgatccaagcttacatcccttggaagca
ccgcgagaatatgttcgcgcaatgaatgctgtgaaacttgaaagagtatttgcaaaacct
tttattggtaatcttgacggacatagagatggtgtatcgagtttggctaaacatcctagc
aggctatcggtgctgacgagtggtgcgtttgatggagaaattcgtcagtgggatttagcc
gttaagaagtgcactaggaatttcgttgctcacgaaggttgggtgcgcgcattgtgctat
acccccgacggtgaaaccttcactagtgttggtgatgacaaaacaattaaaacctggaag
tcggaggttcactcacctgatgatgaggatcccataagcactctactgagtatgtctgta
gtatcaggtataacacatcatagaaataagcctatatttgctacttgtggtgaacactgc
cagctctgggaaaaaactaggaatgaacctgttaaagtgtttaaatggggagtggacagt
cttcatcatgtatcttttaatcaggttgaacataatttgctggcatcatgtgcaagtgac
agaagtgtaattctctatgactgccgtgaatccggacccctcaggaaagttgttatggaa
ctcagatcaaatgccttgtcctggaatccaatggaagctttcatattcactgtagctaat
gaggattacaatctatacacatttgatgtaagaaaactaaaacaaccagtcaacattcac
atggggcacacatcagccgtaatagacgtggattatgcgccaactggccgagagcttgta
gctggaagctatgacaaaactataagaatatttgaaagtcttaaaggaaactccagagat
gtataccatactaagagaatgcaaagactgacatgtgttaaatggacactggacaataag
tacatactctctgggtctgatgaaatgaatattagaatgtggaaagcaagagcttcagaa
aagctcggagtgctcaaaccacgtgagagaacagcactgaactacgcagattcattaaag
gagaagttcgcaaaccatcctcaagtcaaacgcatagcgcgacacaggcacgtacccaaa
cacatactgaatgcccagaaagaaatcaaaactatcaaagacaagtctaaacgaaaggag
ggcaacagacgcgcgcacagcaaacccggctcggtacccttcgttgcagaacgacaaaaa
cacatcgttaaagaagacgaataa
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