Trichoplusia ni (cabbage looper): 113497376
Help
Entry
113497376 CDS
T05757
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113497376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113497376
Spliceosome [BR:
tnl03041
]
Complex A
U1 snRNP components
U1 related factors
113497376
Complex B
113497376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
RYYR-CCHC
Motif
Other DBs
NCBI-GeneID:
113497376
NCBI-ProteinID:
XP_026732716
UniProt:
A0A7E5VX70
LinkDB
All DBs
Position
9:7705720..7712979
Genome browser
AA seq
828 aa
AA seq
DB search
MEPPNSGTSSPGLIGSGPLMPPAMLGGLPPPMPPAVGMPPVPGMPPNMGGMPPPMGFPPM
IPPFSMPPPGFPAFKPSVYQPQDMNAPAPDVAPMANQSSPWSEHKAPDGRTYYYNSVTKQ
SLWEKPDDLKTAAEKLLLACVWKEYTTDAGRVYYHNIETKESSWIIPKDLQEIKDKIAAE
EAAQAALSAEVTPGEVPLPASPSNQTGSSALDEAMAKTLASIDTNLANSIPIPEESKPEE
MSAPMQGNNTDNVEIQPEMQYKDKKEAIEAFKELLKDRNVPSNATWEQCVKIISKDPRYT
AFKKLNEKKQAFNAYKTQKLKDEREEQRLKTKKNRENLEEFLLSCDRVTSLTKYYKCEEM
FSNLEIWRCVPESDRRDIFEDCIFTITKREKEEAKTLKKRNMKMLAQVLENMSEITYSST
WSEAQVLLLENSAFKNDVSLLGMDKEDALIVFEQHIRNLEAEYLQEREQVKKRNKRQQRK
NRDNFLVLLDTLHEEGKLTSMSLWVELYPVISADMRFSAMLGQSGSTPLDLFKFYVENLK
ARFHDEKKVIKEILKEKSFDVKPDTTFEEFATVVCEDSKSASLDAGNVKLTYNSLLEKAE
ARNKEKIKEESKAQKKIESAFKWALTDANIDHQLSWNEVKEKLDLSAPEFAAVPYEEDRV
RIYKDFQHEQEESCMHYHHPKSRKAKRSKKKKRSHSASLSRSRSPSPMQTARSPSPVPSH
GTWTSDEGRKHKKSKKKHRKHSPIPKSPTPEEGGITDDEQLRHKSKKSKRSAPSSPEEEA
HEHAHKPKKKKDKKEKKERSSGSTAWSDAELESRRAALLAQLHEHEAD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcccaatagtgggaccagttcgcctggtcttatcggttctgggccgttaatg
cctccggctatgctgggtggactaccaccgccgatgccacctgcagtgggtatgcctcct
gtgcctggtatgccgccgaacatgggtggcatgcctccgcctatggggtttcctccaatg
ataccaccattttctatgcctcctcctgggtttcctgcatttaaacctagtgtttatcaa
ccacaggatatgaatgctcctgcaccggatgtggctccaatggctaaccagagcagtccc
tggtctgaacacaaagctcctgatggaagaacatattactataactctgtcactaagcaa
agtctttgggagaaacctgatgatttgaaaactgctgcagaaaaattactgttagcctgt
gtttggaaggaatacacaacagatgctggccgtgtgtattatcataacatcgaaactaag
gagtccagctggattatacctaaagatcttcaggagatcaaggataaaatagctgcagaa
gaagctgcccaggctgctttaagtgctgaagtaactcctggagaagtccctttaccagct
tcaccatctaaccaaactggaagctcagctttagatgaggcaatggccaaaacccttgca
tctatagatacaaaccttgccaactctatacccatccctgaagaaagtaaacctgaagaa
atgtcagcacccatgcaaggcaacaatactgataatgtggaaattcagccagaaatgcag
tataaagacaagaaggaggctattgaagctttcaaagaactccttaaggataggaatgtg
ccatcaaacgctacatgggaacagtgtgtaaaaatcatatcaaaagatcctagatataca
gcatttaagaagttaaatgaaaagaagcaagcatttaatgcctacaaaactcagaaattg
aaagatgaaagagaggaacaaagattaaaaactaagaaaaatagagaaaacttagaagag
ttcttgttaagttgtgaccgtgtgacatcattaacaaaatattacaaatgtgaagagatg
tttagtaatcttgagatatggcggtgtgttcccgaatcggatcgaagagatatatttgaa
gattgcatatttactatcacgaaaagagagaaggaagaggcaaagactttgaaaaaacgc
aatatgaaaatgctggcccaggttttagaaaatatgagtgaaattacttacagtagcaca
tggagtgaagcacaggtgttattattagaaaactcggctttcaaaaacgatgtgagtttg
ttaggcatggacaaagaagatgctctcattgtgtttgaacaacatatcaggaatttagaa
gccgaatatttgcaagaacgtgaacaagttaagaaacgcaacaaaagacagcaaagaaag
aacagagataacttcttggttttgctcgacacattacatgaagaaggaaaactgacgtcc
atgtcattgtgggtagaattataccctgttatatctgctgacatgcgattctctgctatg
ctcgggcaaagcggatcgacgccactggatttattcaagttttatgtcgagaatctgaaa
gcacgattccatgacgaaaagaaggttatcaaagaaatattgaaagagaagagcttcgat
gtcaagcctgatactactttcgaagagtttgccactgttgtctgtgaagatagtaagtca
gcatctctggatgctggcaatgttaagttaacttataattcactactcgaaaaggctgaa
gccaggaataaagaaaagataaaagaagaatctaaagctcagaagaagatagaaagtgca
tttaaatgggccctgactgatgccaacatagatcaccagctttcatggaatgaggtcaaa
gaaaagctagatctcagtgctccagaatttgccgctgtgccctatgaagaggacagagtt
agaatttataaggacttccaacatgagcaggaagaaagttgtatgcattaccatcatccg
aagtccaggaaagccaagcgatcaaagaaaaagaaacgatctcactccgcatctctgtcg
aggtcgcggtctccgtctcctatgcaaacggcgcgctcgccgtctccagtgccgagccat
ggcacttggacgtcagatgaaggcaggaaacataagaagtctaaaaagaagcatcgcaaa
cactcgcccattccgaaatcgccgactccagaagagggtggtataacggatgacgaacag
ctgcgacataaaagcaaaaaatccaagcgtagtgcgccctccagccctgaggaagaagca
catgaacatgcgcataaacctaaaaagaagaaggataaaaaggaaaagaaggaacgatcc
agtggatctactgcttggagtgatgcagagctggaatctcggcgagccgctttgctggct
cagttacacgagcacgaggcggactga
DBGET
integrated database retrieval system
