KEGG T05757: 113497748

Trichoplusia ni (cabbage looper): 113497748

Entry

113497748         CDS       T05757

Name

(RefSeq) U1 small nuclear ribonucleoprotein A

K11094

U2 small nuclear ribonucleoprotein B''

Organism

tnl Trichoplusia ni (cabbage looper)

Pathway

tnl03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:tnl00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113497748
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tnl03041]
    113497748
Spliceosome [BR:tnl03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113497748
Complex B
    113497748
Complex C
   U2 SnRNP specific factors
    113497748

SSDB

Motif

Pfam:

RRM_1 RRM_5 RRM_occluded DUF4523 xRRM RRM_10 RRM_PARP14_3

Other DBs

NCBI-GeneID:

113497748

NCBI-ProteinID:

XP_026733250

UniProt:

A0A7E5VY39

LinkDB

Position

1:17824922..17826384

AA seq 222 aa
MTMDIRPNHTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKE
ISSATVALRSMQGFPFYDKPMRIQYSKTDSDVIAKVKGTFQERPKRPKMPKGLDDSRKKK
NKDANRPGMHVGPAGMLNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV
PNRHDIAFVEFANEMQSAAAKEALQGFKITPTHAMKITFAKK

NT seq 669 nt +upstreamnt +downstreamnt
atgacgatggatatcagacccaaccacacaatatacatcaacaatctcaatgaaaaaata
aaaaaggaggagttgaaaaaatctttatacgccatattctcgcagtttggtcaaatattg
gatattgtggcattaaaaacactgaagatgagaggccaagctttcgttatttttaaggaa
atatccagtgcaacagtcgcactaagaagcatgcagggattcccattttatgacaaacca
atgagaatccagtactcaaaaacagacagtgatgtcattgcaaaagttaaaggcaccttc
caagagagaccaaagagaccgaaaatgccaaagggtcttgatgacagcaggaagaagaag
aacaaggatgccaaccgccctggcatgcatgttggtccagctggcatgttgaacaatgtg
aatgctgagcagccacccaaccagatcctgttcttgaccaatctgccggatgaaacttca
gagatgatgttgtccatgttgtttaaccagttccctggcttcaaagaggtgcgtcttgta
cccaacagacatgacattgcctttgttgagtttgcaaatgaaatgcaatcagcagctgca
aaagaagctctgcaaggattcaagatcacacctactcatgctatgaagataactttcgcc
aaaaaataa

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