KEGG   Trichoplusia ni (cabbage looper): 113497908
Entry
113497908         CDS       T05757                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03030  DNA replication
tnl03410  Base excision repair
tnl03420  Nucleotide excision repair
tnl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113497908
   03410 Base excision repair
    113497908
   03420 Nucleotide excision repair
    113497908
   03430 Mismatch repair
    113497908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tnl03032]
    113497908
   03036 Chromosome and associated proteins [BR:tnl03036]
    113497908
   03400 DNA repair and recombination proteins [BR:tnl03400]
    113497908
DNA replication proteins [BR:tnl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113497908
  DNA Replication Termination Factors
   ELG1-RFC complex
    113497908
Chromosome and associated proteins [BR:tnl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113497908
DNA repair and recombination proteins [BR:tnl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113497908
  Check point factors
   HRAD17(Rad24)-RFC complex
    113497908
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_11 Rep_fac_C AAA_22 FtsK_SpoIIIE AAA_16 Sigma54_activ_2 ABC_tran
Other DBs
NCBI-GeneID: 113497908
NCBI-ProteinID: XP_026733513
UniProt: A0A7E5VYU3
LinkDB
Position
10:9481471..9482950
AA seq 355 aa
MSLWVDKHRPRDLMKLDYHKDQAVRLKSLVQQSDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKHVAQTHQ
IDSSGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL
TIRVPAPTESEIASVLQVVCKKESLNIPMELAMRIAKSADRNIRRALLMCEACKVQQYAF
TANQKIPEPDWQQFIRETASMILSEQSPKKLLEVRQKLYDLIIHGVPPDMIFAGLLKELV
RNCDMAMKCQIASHAADYEHRMRLGNKHIFHLEAFVAKFMAIYKKFVEESMGDAF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtctttgggtagataaacatagaccgagagatttaatgaaactagattatcacaaa
gatcaagcagttcgattgaaaagtcttgtgcagcaaagtgactttccgcatcttcttgtt
tacggaccgtcaggagccggaaaaaaaacacgtatcatgtgtttactaagggaactttac
ggttcgggcgtagaaagactacggcaagaaacaatgaattttacgacaccatccaataag
aaaatagaaattatgactgtaagtagcaactaccacattgaagtcaatccaactgatgtc
ggtattcacgatcgggttgttatcatggatttggtgaagcatgttgctcaaactcatcaa
attgactcttcaggtcaaagggagttcaaagttgtcatattgaatgaagtagatgattta
accaaagatgcacagcatgcattacgtcgaaccatggagaaatatgtcgctacttgtcgt
cttatccttattgcaaactcaatttctcgtgtcattcctgcaattaggtctcgatgtttg
actatcagagttcctgcacctacggaaagtgagatagcatctgtgctccaagtagtttgt
aaaaaagaaagtttgaatatacctatggagttagccatgcgcattgccaaatctgctgac
cgtaatataaggagggcactgcttatgtgtgaagcttgtaaagtccaacaatacgcattt
acagcaaatcaaaagataccagaaccagactggcagcagtttataagagagacagcttca
atgatattatctgaacagtctccaaaaaagttgttggaggttcgtcaaaagctatatgac
ctcattatacatggagtaccaccagacatgatttttgctggactgttgaaggaattggta
cgtaactgtgatatggcaatgaaatgtcaaatagccagtcatgcagcagactacgaacat
agaatgagattaggcaataaacacatattccaccttgaagcctttgttgctaagtttatg
gctatctataagaagtttgttgaagaatctatgggtgatgcattttaa

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