Trichoplusia ni (cabbage looper): 113497908
Help
Entry
113497908 CDS
T05757
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03030
DNA replication
tnl03410
Base excision repair
tnl03420
Nucleotide excision repair
tnl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113497908
03410 Base excision repair
113497908
03420 Nucleotide excision repair
113497908
03430 Mismatch repair
113497908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnl03032
]
113497908
03036 Chromosome and associated proteins [BR:
tnl03036
]
113497908
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113497908
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113497908
DNA Replication Termination Factors
ELG1-RFC complex
113497908
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113497908
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113497908
Check point factors
HRAD17(Rad24)-RFC complex
113497908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_11
Rep_fac_C
AAA_22
FtsK_SpoIIIE
AAA_16
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113497908
NCBI-ProteinID:
XP_026733513
UniProt:
A0A7E5VYU3
LinkDB
All DBs
Position
10:9481471..9482950
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKHRPRDLMKLDYHKDQAVRLKSLVQQSDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKHVAQTHQ
IDSSGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL
TIRVPAPTESEIASVLQVVCKKESLNIPMELAMRIAKSADRNIRRALLMCEACKVQQYAF
TANQKIPEPDWQQFIRETASMILSEQSPKKLLEVRQKLYDLIIHGVPPDMIFAGLLKELV
RNCDMAMKCQIASHAADYEHRMRLGNKHIFHLEAFVAKFMAIYKKFVEESMGDAF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtagataaacatagaccgagagatttaatgaaactagattatcacaaa
gatcaagcagttcgattgaaaagtcttgtgcagcaaagtgactttccgcatcttcttgtt
tacggaccgtcaggagccggaaaaaaaacacgtatcatgtgtttactaagggaactttac
ggttcgggcgtagaaagactacggcaagaaacaatgaattttacgacaccatccaataag
aaaatagaaattatgactgtaagtagcaactaccacattgaagtcaatccaactgatgtc
ggtattcacgatcgggttgttatcatggatttggtgaagcatgttgctcaaactcatcaa
attgactcttcaggtcaaagggagttcaaagttgtcatattgaatgaagtagatgattta
accaaagatgcacagcatgcattacgtcgaaccatggagaaatatgtcgctacttgtcgt
cttatccttattgcaaactcaatttctcgtgtcattcctgcaattaggtctcgatgtttg
actatcagagttcctgcacctacggaaagtgagatagcatctgtgctccaagtagtttgt
aaaaaagaaagtttgaatatacctatggagttagccatgcgcattgccaaatctgctgac
cgtaatataaggagggcactgcttatgtgtgaagcttgtaaagtccaacaatacgcattt
acagcaaatcaaaagataccagaaccagactggcagcagtttataagagagacagcttca
atgatattatctgaacagtctccaaaaaagttgttggaggttcgtcaaaagctatatgac
ctcattatacatggagtaccaccagacatgatttttgctggactgttgaaggaattggta
cgtaactgtgatatggcaatgaaatgtcaaatagccagtcatgcagcagactacgaacat
agaatgagattaggcaataaacacatattccaccttgaagcctttgttgctaagtttatg
gctatctataagaagtttgttgaagaatctatgggtgatgcattttaa
DBGET
integrated database retrieval system