Trichoplusia ni (cabbage looper): 113497976
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Entry
113497976 CDS
T05757
Name
(RefSeq) polycomb protein Scm
KO
K11461
polycomb protein SCMH1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113497976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113497976
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
113497976
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MBT
SAM_1
zf-FCS
SAM_2
SLED
SAM_PNT
DUF2116
Motif
Other DBs
NCBI-GeneID:
113497976
NCBI-ProteinID:
XP_026733633
UniProt:
A0A7E5VZ58
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Position
10:complement(3334011..3340218)
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AA seq
640 aa
AA seq
DB search
MSNNTVGSSGPAPGKIRGPGRPPKRTCTWCAESKTPLKYVLPTENGKKEFCSETCLSEFR
QAYSKGACLHCDNVIRGNAPSSSKNFCSTYCLNKYQKKNEKRTTSPQSGNGANGSENNSN
NNSTGSFYDIYQAFDWNDYMKDTNSVAANQECFKQAPMPPVNDFKVSMKLEALDPRNLTS
TCIATVVGVLGPRLRLRLDGSDNKNDFWRLVDAGDIHPIGHCEKNDGMLQPPLGFRMNAS
SWPMFLLKTLNGAEMAPAKVFQPEPPTPKSNLFVVGQKLEAVDKKNPQLICCATVGAVKN
DQIHVTFDGWRGAFDYWCRYDSRDIFPVGWCARAGHPLQPPGQKSATTPSRFKLRPSGMP
NPALPEGGSTGAGNSNSPTTPIPLATVCLRIRSSCSGGSSSLPSSVSGSGPTGAAESLVK
ELLSVHPDPQRLTRAILTASSSYSNVNNVQISSGSKNYSVKVPSELTADELKNWLKGVCN
GVGCCVGMIDIDSGEAAGRPCTLCGESTSNNVTTGVKRPKTEESDGTNVNGSGECSSGKL
ARVSPERPEPASSTTGAPPPPSPSSPPADWSVEDVIGFIAAADQALAAHADLFRKHEIDG
KALLLLNSDMMMKYMGLKLGPALKICNLVSKIKNRRHYST
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaacactgtcggctcgtcggggcctgctcccggcaaaatacgtggacctgga
agacctccaaaacgcacatgcacctggtgcgctgaaagtaaaacacctctaaagtatgta
cttccaacagagaatggcaagaaagaattttgttctgaaacgtgtttgtctgaattcaga
caggcatacagcaaaggcgcctgtcttcactgtgacaatgttattcggggtaatgcgcct
tctagtagtaagaatttttgttctacatattgtttaaataaataccaaaagaaaaatgaa
aagcgaactacgtccccgcaatcaggtaatggagctaatggttcagaaaataactctaat
aacaattctacgggttcattttacgacatatatcaagcatttgattggaatgattatatg
aaagacacaaacagtgtggcggcgaatcaagaatgtttcaaacaggctcccatgcctcct
gtaaatgacttcaaagtgagcatgaaattagaggctctagatccacgcaacttgacatcg
acctgcattgcaacagttgtaggagtcctgggtccacgcttaaggttaaggctagatggc
agtgataataaaaatgatttttggcgtcttgttgatgctggtgacatacatcccatagga
cactgtgaaaaaaatgatggtatgttgcagccaccacttggttttcgtatgaatgcaagt
agttggccgatgtttttgttaaaaacattgaatggtgcagaaatggctccagcaaaagtt
tttcaacctgaacctccaacccctaagtcaaatctgtttgttgtgggtcaaaaattggag
gctgtggataagaaaaatccacagttaatatgttgtgcgacagttggtgcagtgaagaat
gatcagatacatgtaacttttgatggatggagaggagcatttgattattggtgtagatac
gattcaagagatatatttccggttggttggtgtgctagggctggtcatcctctacaacca
cctggtcaaaaaagtgctactacaccctcaaggttcaagctaaggcctagtggaatgcct
aacccagctttgcctgagggtggatctactggtgccgggaactcaaacagtcctactacc
cccatcccattggccactgtgtgcctgcgtattcgtagcagttgctctggaggcagcagt
tccttgccaagttcagtttctgggtcaggacccactggagccgctgaaagtttagtaaag
gaattgctcagtgtacatccagatcctcaaaggttaacaagagcaatactcacagcatct
agtagctattctaatgttaataatgtacagatttcatcaggaagtaaaaattattctgtc
aaagttccttcagagttgactgcagatgaacttaaaaattggttaaaaggagtgtgtaat
ggagttgggtgttgtgttgggatgatagacatagactcaggggaggctgcaggtcggcct
tgcaccttatgtggcgagtcaacatcaaataatgttactacaggtgtcaaaagaccaaaa
actgaggaaagtgatggcactaatgtgaatgggtctggtgagtgctcgagtggaaagctg
gctcgcgtgtccccggagcggccagagccggcgtcgtccactacgggggcgccgccgcca
ccttcgccgtcctctccacccgctgactggtctgtggaagacgtcattggttttattgca
gccgctgatcaggcattagccgcccatgctgatttatttaggaaacatgaaattgacggc
aaggcgttgttgctattgaattcggacatgatgatgaagtacatgggcttaaaattggga
cctgcactaaaaatctgtaacttggtatctaaaataaaaaatcggcgacattatagcacc
tag
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