Trichoplusia ni (cabbage looper): 113498124
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Entry
113498124 CDS
T05757
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113498124
03015 mRNA surveillance pathway
113498124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113498124
03036 Chromosome and associated proteins [BR:
tnl03036
]
113498124
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113498124
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113498124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
113498124
NCBI-ProteinID:
XP_026733862
UniProt:
A0A7E5W004
LinkDB
All DBs
Position
10:3205387..3206399
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AA seq
157 aa
AA seq
DB search
MAGLESMVVEEVKPAEKPVDREKTCPLLLRVFCSTGRHNSPGDYARGNVPQNELQIYTWM
DATLRELTGLVKEVNPDTRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL
GQVKFQIGNYLDISITPPNRMPPPMRRPQPYMNNRQY
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggctggactagagtccatggttgtcgaagaggttaagcctgcagagaagccggtcgat
agagaaaagacttgcccattattacttcgcgtcttctgttcaactggacgtcacaattcg
ccaggagattatgcaagaggaaatgttcctcagaatgaacttcaaatatacacatggatg
gatgctactcttagagagctgactggactcgtgaaggaagtaaatccggacaccagacgt
aagggcacatattttgactttgcaattgtctaccctgatatgcggtcacccacataccgc
atgagagagattggtgtcacttgctctgggcagcgtggaggagatgataacaagacatta
ggccaagtaaagttccagattgggaactatctggacatatcaataacaccaccaaacaga
atgcctcctccaatgagacgtccacagccttacatgaataatcgtcaatactga
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