Trichoplusia ni (cabbage looper): 113498204
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Entry
113498204 CDS
T05757
Name
(RefSeq) transcription factor collier
KO
K09103
early B-cell factor
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113498204
Transcription factors [BR:
tnl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113498204
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
113498204
NCBI-ProteinID:
XP_026733943
UniProt:
A0A7E5VZZ9
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Position
10:complement(9025664..9072046)
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AA seq
587 aa
AA seq
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MFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSN
LRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIR
QEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHG
RRAKRLDPSEGTDAATDPTCLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQ
VVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPT
IDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMP
FNSYTGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAAPAAYPHPQHYPA
PPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYYTKDSGHYSERNGNSKSVEDCPVNIH
TKCTDGDMKGAQSKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcctgcatcaccaagaagccgcgggcggtctgcacgcgcagccccgcggcccc
gtcacctcgctcaaggaggaaccgctgaccagggcctggatgacaccaacctccttagtt
gataataccaacagtgtgggggtgggtcgagcgcactttgagaagcaaccacccagcaac
ctgcgcaagagcaacttctttcacttcgtggttgccctctacgatcgtgctggacaacca
gtggaaatcgagagaaccgccttcatagggttcattgagaaagatcaggaagttgaagga
caaaagacaaacaatggcatccaatacaggcttcaattactttatgcaaacggtatccga
caagaacaggacatatttgttcggctcatcgactccgtcaccaaacagccaatcgtctat
gaaggtcaagacaagaatccagaaatgtgccgagttttattaacacacgaagttatgtgc
agtcggtgttgtgacaagaaaagttgtggaaacagaaacgaaacaccctcggatcctgtt
atcatcgaccggtttttcttaaagttcttcctaaaatgcaaccagaactgtttgaagaat
gcagggaatcctcgggacatgagaaggtttcaggtggtaatatcaacacaagtgatggtc
gacggtcctctcctagcgatatccgacaacatgtttgtccacaacaacagcaagcacggc
cgaagggcgaagcggctagacccaagcgaaggtacagacgccgcgacagaccctacttgt
ttatatccgccattgccagtagctacgccgtgcatcaaggcgatatcaccgagcgaaggt
tggacgtcaggaggatcgacagtcatcatagttggggataacttctttgacggactgcaa
gtcgtttttgggaccatgttggtgtggagtgagttaataacatcacacgcgataagagtg
cagacgccgccgcgacacatacccggcgttgtggaagtcacgctctcgtataagagcaag
cagttctgcaagggagcgcccgggagatttgtttacgtttcagcgttgaacgagccgacg
atagattacggttttcagaggctacagaaacttataccgagacatcctggtgacccggaa
aaattaccaaaggaaataatactaaaacgagcagcggacttagccgaagccttatactcg
atgcctcggaacaaccaactcggtcttggcgcgcctcgctcgccgcctgcaagcatgccc
ttcaactcgtataccgggcaactggctgttagtgtgcaagacactgcggcctcacagtgg
actgaagaggagtacgcgcgtagcggcggcggtggctcggtgtcgccgcggtactgctcg
gccgcgtccacgccgcacgccgcgcccgccgcctacccgcacccacaacactaccctgcc
ccgccgacgtcactgtttaatactacgtcactgtctctaggcccgtaccatccagcgaac
atgaatggacacttatcatctgaccgtcactataacgcgtattatacgaaagatagcgga
cattacagtgaaagaaatgggaattctaaaagcgtggaagactgtccggtaaacattcat
acaaaatgtacggacggcgatatgaaaggggctcagagtaaagagactaagctgagaagt
gcctttgccgttgtaaggcagagtccgccgcgggttgccaatgaacatcaccagaactgg
caccacctcgccgttcagtgttag
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