KEGG   Trichoplusia ni (cabbage looper): 113498215
Entry
113498215         CDS       T05757                                 
Name
(RefSeq) protein LSM14 homolog A
  KO
K18749  protein LSM14
Organism
tnl  Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113498215
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113498215
SSDB
Motif
Pfam: Ribosomal_L18 LSM14 FDF SM-ATX Ribosomal_L27A
Other DBs
NCBI-GeneID: 113498215
NCBI-ProteinID: XP_026733954
UniProt: A0A7E5W030
LinkDB
Position
10:10077114..10096232
AA seq 708 aa
MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ
VYDYILFRGSDIKDIRVLNNVPSLPNDPAIMQMSVPPTLGAGSAPGQFTGQYTHPVVGQT
PYPQYHPMAGFPGNVHAQLNKTSELSPQTSVELAPQPPPATAPIGSGVAHHANQVKDQGS
MLDLIGGGSQQSASRSGTPAVGAHRKSPTADQGTQVGSVASGSSQQRDSRRGSNGQAAKG
PANRNRTNSRNRQRYPSGGAPVPHQQQQHHQPQHHQQPHHQQQQHHQQPQQQQHNQHNQH
NQHNQQLSNQQPHHHHQSVNMMGLLGQGYGRGGWRGRPRGRGRGFVPRNKNTLKFDKDYD
FEQANTEFEELRSQLAKAKISDGEVKVEESEVIIMTQGEVDKKDDSGNETGAGEPEVDED
QNGYTGYDKTKSFFDNISCEAVERSKGRSQRTDWRTERKLNSETFGVASARRGAWRGRGG
WRHHNPQHQQNYVHSFSDDGRWRAGRGARGGARGGGRSLFHPVVKMGIDINHKHDRKVRR
TEVKSQDVYLRLLVKLYRYLARRTNAKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTR
EGMIAVVVGSITNDVRLYTVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAK
TVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRSKGHERARPSRRSNV
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgagttctggaatgcccgaattgggctccaaaataagcctaatatctaaagctgatatt
cgctacgaaggccggcttttcaccgtcgatcctcaggaatgtaccatcgctctagctagc
gtgcgctcatttggtacggaggatcgggagactcagtaccctgtggcacctcagagccag
gtgtatgactacatccttttccgtggttctgacataaaggatattcgtgttctgaacaat
gtcccctctctaccaaatgacccggccatcatgcagatgtctgtgcccccgacgctcggc
gcaggcagtgcgccgggccagttcacggggcaatacacccacccagtggtcggccagact
ccttacccccagtaccacccgatggctggcttcccaggaaatgtccatgctcagcttaac
aagaccagtgagttgtctccgcaaacctccgtggagctggcaccccagcccccacctgcc
acagctccgattggctcaggagtggcgcatcacgccaatcaagtgaaagaccaaggctct
atgcttgacctcattggaggaggatctcaacaaagcgcttcacggtcgggaacgcccgct
gttggcgctcacaggaaaagcccaactgctgatcagggcacgcaggtcggctctgtggct
agtgggtctagccaacaacgcgacagccgacgcggcagcaacggtcaagcggcgaagggt
ccggcgaaccgtaaccgtacgaactcgcgcaatcgccagcgctaccccagcggcggcgcg
cctgtgccgcaccagcaacagcaacaccatcaaccgcagcaccatcagcaaccgcatcat
caacaacagcagcatcatcaacagccgcagcagcagcaacataaccagcacaaccaacat
aatcagcacaaccagcagctctcgaaccagcaacctcatcatcatcaccagtctgtaaat
atgatggggcttttaggccagggctatggtcgtggcggctggagaggacgaccccgcggt
cgcggccgcggctttgtcccccgcaataagaacacgctcaagttcgacaaggactacgac
tttgaacaagccaacaccgagtttgaagaactgcgtagccaacttgccaaggccaagata
tctgacggcgaggtgaaggttgaggaatctgaagtgattattatgacgcagggtgaggtt
gacaagaaagatgactctggtaatgaaactggtgctggtgaaccagaagtagacgaagac
cagaatggttacactggatatgataagaccaagagtttctttgacaacatctcatgtgaa
gctgtggagaggtcaaagggtcgaagccagcgaacggattggcgaacagagcgcaagttg
aactcggaaacgtttggtgttgcgtcggcgcgtcgtggagcctggcgtggtcgcggtggc
tggcgccatcacaacccgcagcaccagcagaactacgtgcacagcttctctgacgacggg
cgatggcgcgcgggtcgcggggcccgcggcggggcgcgcggcggagggcgctctcttttt
catccggttgtcaagatgggtatcgacatcaaccataaacacgacaggaaagttaggcgt
actgaagttaaatctcaggatgtctacctgaggttgcttgtaaaactctacagatacttg
gctaggcgtacaaatgccaagttcaacacgatcatcctgcgcaggctgttcatgagccgc
atcaaccggcctccactatctctgtcgcggttggcccgccacatgaagaagccaactcgc
gagggtatgatcgccgtggttgtcggcagcatcaccaacgatgtcaggctatacactgtg
cctaagatgtccgtcgctgccctgcacgtcaccgagaaggctcgtgcccgcatcttggct
gctggaggagaaatcctgactttcgatcagctggctctgcgcgccccgaccggcgctaag
accgtgctgctgcagggtcgccgcaacgcccgcgaggctgtccgtcacttcgggcccgcg
cctggagccccgcgctcacacaccaagccctacgtgcgctctaagggacacgaacgtgca
cgacccagtcgtcgttctaacgtgtaa

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