KEGG   Trichoplusia ni (cabbage looper): 113498503
Entry
113498503         CDS       T05757                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl00565  Ether lipid metabolism
tnl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    113498503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tnl03036]
    113498503
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tnl04147]
    113498503
Chromosome and associated proteins [BR:tnl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113498503
Exosome [BR:tnl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113498503
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_SCAP WD40_RFWD3 Beta-prop_RIG_2nd LisH_PAC1 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_RIG_1st eIF2A Beta-prop_NWD2_C LisH Nucleoporin_N Beta-prop_WDR35_TULP_N Beta-prop_WDR11_2nd RMC1_N Beta-prop_NUP159_NUP214 PROPPIN Pox_A_type_inc
Other DBs
NCBI-GeneID: 113498503
NCBI-ProteinID: XP_026734323
UniProt: A0A7E5W129
LinkDB
Position
11:9806101..9829818
AA seq 393 aa
MKMVLSQRQREELNKAIADYLGSNGYTDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR
LQKKVMELESKLSEAQKEFIEGAPTRAKRTPAEWIPRPPEKFCLTGHRATITKVIFHPVF
SLMVSSSEDATIKVWDFESGEYERTLKGHTDSVQDIAFDHHGKLLVSCSADMSIKLWDFN
QTFECVKTMHGHDHNVSSVAFSPSGDIVYSASRDKTIKAWEVATGYCIKTYKGHREWVRM
VRVSPDGTLLASCSNDQTVRIWNADTNECKMELREHEHVVECVSWAPEASAAAINEAAGT
DNRRANHIGPFLASGSRDKSVKIWDVSTGQCLATLXGHDNWVRGAAWHPGGRYLLTASDD
KTLRVWDVAHTRCLKTLYAHHTLRHQSRFVAFI
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgaaaatggtgttgtcacaacggcaacgagaggagctgaacaaagcgatcgccgattat
ttaggtagcaatggctacacggacgcgctggaagcgttcaaaaaggaggccgatatgacc
ggcgaaatggatcgcaagttcggcggcctcctcgagaagaagtggacttcggtcatcagg
ttgcagaaaaaggtgatggagttagaatcgaagctgtccgaggctcagaaggaattcatc
gagggtgctccaacgcgcgccaaacgcactccagccgagtggattccacggccgccggaa
aaattctgccttaccggacatcgggccaccattactaaggtaatatttcacccagtgttc
agtttgatggtctcctcaagtgaggacgcaaccatcaaagtgtgggactttgagagcggc
gagtacgaacgaaccctaaagggacacaccgattccgtacaggatatcgctttcgaccat
catggaaaacttcttgtatcctgcagcgctgacatgtcaatcaagctgtgggacttcaac
caaacattcgaatgtgtaaagacaatgcacggacacgaccacaatgtgtcgtcagtggct
ttctcaccgagcggcgacatcgtctactccgccagtcgagataagaccatcaaggcatgg
gaggtggccactggctactgcatcaaaacatacaagggtcatcgcgagtgggtgcgcatg
gtgcgtgtgtcacccgacggcacgctcctcgcgtcgtgctccaacgaccagaccgtacgc
atctggaacgccgacaccaatgaatgcaagatggagttgcgcgagcacgagcacgtagtg
gagtgcgtgtcgtgggcgccggaggcctccgccgcggccatcaacgaggcggccggcacg
gacaaccgccgcgccaaccacatagggcccttcctggccagcggctctcgggacaagtcc
gttaagatctgggacgtgagcacggggcagtgcctggccacgctgngtgggcacgacaac
tgggtgcgcggcgcggcctggcacccgggcggccgctacctgctcacggcctccgacgac
aagacgctgcgcgtctgggacgtcgcgcacacgcgctgcctcaagacgctctacgcgcac
cacacacttcgccaccagtctcggttcgtagcatttatctaa

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