Trichoplusia ni (cabbage looper): 113498550
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Entry
113498550 CDS
T05757
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113498550
Membrane trafficking [BR:
tnl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113498550
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113498550
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113498550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
BORCS8
SIN1_PH
PHD
Motif
Other DBs
NCBI-GeneID:
113498550
NCBI-ProteinID:
XP_026734391
UniProt:
A0A7E5W291
LinkDB
All DBs
Position
11:6877193..6930266
Genome browser
AA seq
1466 aa
AA seq
DB search
MKTKLTSVTYLGFTAMDRRFSNAMLPWLLKEIRTTGIRDKLSIAVEDGCLKAYNGNFEPV
IIHRLVDIIRASQVPGRPEELFYILLNEKEGLLNCYLFRAATVHEVTDLFGQMREPSPGT
ASPRGSNSSLANGAVTRNLGFQQQNSSEHLPWSSPAISLPGNCNSNLTSETQSPMVRSIS
NASALTSLCADLSASDSHFFEVLYIGKVRISQRKVPESLIDDALNKFAQHEAEKALKQRR
HSLLSSTGTSIYSNDSKENLEQEGTPPHELFNNSKKILTPSTTPLEPDKAWASAETLNQK
PDPKKIDEEFDMFTKERVETSQKPESLRKPTPIPLEPNVLVLNVPKNNLDTVREEDKNEL
TSVISETASSITEFCQKSVEKSKLEPQDPFLDNKIRKDSPAPMNFQEINRKPTVVERKTL
TENKPFLRDRSASIGTINQKTPIAQLIGEQNRTMLFQVGRAELRLISPDRKQILLHRGFK
DVASCVLGRMNKEHFGFVCRETNDTYACYVFKCESDCVAQEVINAIKQAFVAHAELLKKT
REKSPNMTCEHCPMLWYHRLCHDIESMNDKKTHAFILRRIEQLPEDEQDLIITKYQGGTN
HMYETSEHNAFLMMLLRAHCEAKQTRHVHDTAENRSEFLNQYLGGSTIFSKARRSISSSF
DLLKRKASRDDGLVAPIIKKDTSPLPTPVPDTSEVVPELLSPDSGRAKSLSPAVIEDLTP
SPRSNMTPTLEEDEEAGTPPANSPMMDIFLKVSDSRPAQVEAGTENEATWRQAIYEKVAQ
PDVQIEGDLPSTRLRKISAAKQGKRTKEELRQLWKMAIDQTILLVRMEKENARLRESEES
SAVRRIKLEYTELGTCAAGAILMWDSLLSRDHSQPMAKVDRHMLTQAVIQGVPRMSRGAV
WYFLAEQASLRAAPPDTRAAPLYHAPYAALLAGLTKHQHAILIDLGRTFPKHSYFASALG
PGQLALYNILKAYSLLDPDVGYCQGLSFVAGVLLLHMEEAEAFVLLRHLMFRRGLRKQYL
PDMSALQVQLYQLSRLLRDHEPDLHEKLEALDISPALYAAPWMLTLFTSQFPLGFVVRVF
DLIFLESLDIVFSVSLALLSAHKDGLMLCESCEEAAEYLKHKLPDMDKGFYEKVMKKVLS
FDISRQLCDYAVEYAVLREEMPRLASLTEDNRQLVEDKNRMSEELDEAMDAITNYQKNQT
RLETINKSLEQQLTLLSRYISAHSKQDLPLEVKKIVQNHSKKLSFKIFSTKNNEEQDDPK
KNFKTGLSSPNLFSKIAREDSPKDIEHERRQFMMKKSQSVHSGLIANMKNYQLKVLEEKN
GNHKAENITESLKELGKKHSGFFASTHEQIRQERLFEHELKNNFDENLRRLDQKLNEKLN
PTSYMDDLSIFQSRKSMSLNLQTPKEGKVNDSGFVTPLSPEDSKKDDSCSTISHPLSDVD
VEIKFDGQSTKLKQIRPIKNIQVEKS
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaactgacgtccgtgacatatcttggtttcactgccatggaccgcagattc
tccaacgctatgctgccgtggttgctaaaggaaattagaactactgggataagagataag
ctcagcatagctgtagaagacggctgtttgaaggcgtacaatggtaactttgaacccgtt
ataatacaccgactcgtcgatataatcagggccagtcaagtgccaggtcgtcctgaggag
ctgttctacatactcctcaatgagaaggagggtctgctcaactgttacctcttcagagca
gccacggtgcatgaggtgacagacctgttcggtcagatgcgggagccgtccccggggacc
gcgagcccccgcggctccaacagctccctggccaacggcgccgtcaccaggaacctgggc
ttccagcagcagaacagctccgagcacctaccttggagcagcccagcgatatcgttaccg
ggaaactgtaattctaacttaacgagcgagacacagtccccaatggttcgcagcatcagc
aacgcatctgcgctcacatctctatgtgctgacctttcagcgtccgactcacactttttt
gaggtcctatacatcggtaaagtccggatatcacagcggaaggtcccggagtccttgatc
gacgacgcactgaacaaattcgctcaacatgaagctgaaaaggctttgaagcaacgccga
cacagcctcctgtcatcaactgggacttccatatacagcaatgactcaaaagaaaacctt
gaacaagaaggcactccaccccacgagcttttcaacaacagcaagaagatcctgactcca
agcacaacgcccctagaacctgacaaagcatgggcaagcgcagaaaccctcaaccaaaaa
ccagacccaaagaaaattgacgaggaattcgacatgttcacgaaagaacgagtcgaaaca
tcccaaaaaccagaatctttaagaaaacctaccccaataccattagaaccgaacgtgtta
gttctaaatgtacccaaaaataatctagacacagtcagagaagaggacaaaaatgaacta
acctcagtcatatctgaaactgcgtcgtcgataactgaattctgtcaaaaaagtgtcgaa
aagtccaaattggaaccacaagatccgtttttggataataagatacgaaaagatagtccc
gcaccgatgaattttcaggagattaatagaaagccgacggttgttgaaaggaagacgctg
acggagaataagccgtttttgagggatcgttccgcgtctataggtactattaatcagaaa
actccgattgcgcagctgattggagagcagaataggactatgttgttccaggttggtcgt
gccgaactccgtttgataagtccagataggaaacaaatacttctacacagaggtttcaaa
gatgtcgcctcttgtgtattagggaggatgaataaggaacacttcggctttgtatgtcgg
gagaccaacgacacatacgcttgttacgtgttcaaatgtgaaagcgactgtgtggcacag
gaggttattaatgcaatcaagcaagcattcgtggcccacgccgagcttctgaaaaagact
cgtgagaagtctccgaacatgacttgcgaacactgtcccatgctgtggtaccatcgactc
tgtcatgatattgagagtatgaacgacaagaaaacacacgcgtttattcttcgacgcatc
gaacagctgcctgaagatgaacaggatctcatcatcacgaagtaccagggaggcaccaat
catatgtatgagacaagtgaacacaacgctttcctcatgatgttactacgagcgcactgc
gaggcaaaacaaactaggcatgttcatgataccgctgaaaataggtcagagttcttaaac
cagtacctaggtggcagcactatcttctcaaaagcgagacgctcgatttcaagcagtttc
gatctcctcaagaggaaagctagcagggacgatggcttggtagcacctattattaaaaag
gacacatcccccctccccacaccggtcccggatacgtcagaggtagtgcctgagcttctg
tctccagactccgggagagccaagagtttgtctccggctgtcatcgaagacttgactccc
tctccgcgatccaacatgactcccactcttgaagaggacgaggaagctggcactcctcca
gccaactctcctatgatggatatctttctaaaagtgagtgacagtcgtccagcgcaagtt
gaagctggcaccgagaacgaggcgacttggagacaagctatctatgagaaggtggctcaa
cctgatgtgcagattgaaggagatctaccatcaacccgtctaagaaaaatatcagcagcc
aaacagggcaaaagaacgaaagaagaattacgtcagctttggaaaatggccatcgaccag
actatactactggtcagaatggaaaaagaaaatgctagacttagagaaagtgaagaatca
tcagctgtccgccgcataaagctggagtacactgagttgggtacgtgcgcggccggcgcc
atactcatgtgggactcgctgctatccagggaccactcgcaacccatggctaaggtcgac
cggcatatgttgacacaagcggtaatacaaggcgtcccgcgcatgtcccgcggcgccgtg
tggtacttcctggcggagcaggcctcgctgcgcgccgcgccgcccgacacgcgcgccgcg
ccgctgtaccacgcgccctacgccgcgctgctggccggcctcaccaagcatcagcatgcc
atactcatcgacctaggacgtaccttcccgaagcactcgtacttcgcctcagcacttggt
ccgggacagctagctctgtacaacatcctcaaggcgtactccctgttggaccctgacgtg
ggctactgtcagggtctgagctttgtcgctggggtactgctgttacatatggaagaagcg
gaggcattcgttctcctgcgccacctgatgttcagacgcgggctgcggaagcagtacctg
cctgacatgagcgcgctacaagtacagctataccaactctcccgccttctccgtgaccat
gagcctgatctgcatgaaaagctggaagccctggacatctcgccggccctgtatgctgct
ccctggatgctgacactcttcaccagccagttcccacttggattcgtggtcagggtcttt
gatctaatcttcctagaatccttggacatcgtcttttctgtgtccctggctttgctgtca
gcccacaaggacggtctcatgctgtgtgaaagctgtgaggaagcggctgaatacctcaag
cacaagttgcctgacatggacaagggcttctacgagaaggttatgaagaaggtactaagt
ttcgatataagccgtcagctgtgcgactacgccgtagaatacgctgtgctacgagaggaa
atgcctcgcttggcctcgcttacagaagataacagacagctcgtagaagataagaacagg
atgagcgaggaacttgatgaggccatggacgcgataacaaactaccagaagaaccaaact
cgattggaaacgatcaacaaatcattagaacaacaactaacgttactaagcagatacatc
tcagcacattcaaaacaagaccttcctttagaagtcaagaaaatagtccaaaaccacagc
aaaaaactatccttcaaaatattctccacgaagaataacgaagaacaagacgatccaaag
aagaacttcaaaacaggattgagttctccaaatctcttctccaaaatcgccagagaagat
tctccaaaggacatagagcatgaaagaagacagtttatgatgaagaagtcacaatcagtg
cattctggtttaatagcaaacatgaagaactatcaacttaaagttctagaagaaaagaat
gggaatcacaaggcggagaacattacagaatctttgaaagaacttggaaagaagcattct
ggcttcttcgcaagcactcatgaacaaatacggcaagaaagactctttgaacacgaacta
aaaaacaatttcgacgaaaatctgaggcgtttagatcaaaaattgaacgagaaattgaat
ccgacatcttatatggacgatttaagcatattccagagtcgaaagagtatgtctcttaac
ctacagacaccaaaagagggtaaggttaacgacagtggttttgtcacgcctttgagtccg
gaagatagtaagaaagatgattcctgctcaaccatatcccatcctctgagtgatgtcgat
gtagaaatcaaatttgatgggcagtcgacgaaattgaaacagattagaccgataaagaat
attcaagttgaaaaatcttag
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integrated database retrieval system
