Trichoplusia ni (cabbage looper): 113498713
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Entry
113498713 CDS
T05757
Name
(RefSeq) uncharacterized protein LOC113498713 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04137
Mitophagy - animal
tnl04140
Autophagy - animal
tnl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113498713
04137 Mitophagy - animal
113498713
04148 Efferocytosis
113498713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113498713
Transcription factors [BR:
tnl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113498713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
113498713
NCBI-ProteinID:
XP_026734631
UniProt:
A0A7E5W2V3
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Position
11:complement(1053759..1141573)
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AA seq
970 aa
AA seq
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MLVNGFEQIPQVCPVRGYEDAGWNSQCPMAGQWSRQIDTSQCGYGNYNPNFKSPSVQCYR
NAPYVPYGHDNVFPYYPPQEVYQQPVPYVPPLPVPNLPCHGQQPWDYNNMCFDVDGQPCQ
YTTVVDLEDFMNNEKRKEKSRVAARCRRTKEMQIFAELTAALPARKEDVEQLDKASVMRL
AISYLKVRDVVTLLPEPESDHPKIPNPKDMDELSTELSYMKALDGFVLVLSQQGDIVYCS
ENIADHLGVSQMEIMGQSVFEFSHPCDHDEIREALRSSSTGRRDLLLRLKCTLTSKGRNV
HLKSASYKVIHITGHMLMPEENSERNNNDEKKQDGDDKKLPSKNGSLVAVGRPIPHPSNI
EIPLDSKTFLSKHSLDMKFTYVDEALMNTLGFEPDELVGRSVYEYHHAADTGSLVQQFKS
LFSKGQCETGRYRFLAKTGGYAWVQTQATVITDKQQKAISVVCVNYVISGIECKDEVFAA
HQVHHADLKPVLANVASEPAANGAIVAIIPPEEERPIPVTELIFAPRKKEMNKGFLMFSQ
DEGLTSEWHSNFHSLVLKDEPEDLTHLAPTAGDACIPLENSPFDMFDEFILSDNYCSLLG
DDLANGSPVDSLTPDSLLLSSPEPQENESSCEQSSLLTELSLDAFDSNRSDNDIDDGNSP
FIPTSDELPVLEPAVMWGALPDSVSMARPHPTEMQTTSPAPALQRLLTATTTGPPPQDLI
TNIYSDQGLIPSRSVASWDTGVKRVMKQEQEPCAKRVKRSPSPAQATTPAPSSSVLMNLL
DLQQQLPQQKPQMQPNFQLVRNQQPIMQNPNMNTIPLPVINLLQGMPKQMLHSNTPMNVV
RSNISSPMSPLSLNVSPMYSLPSSPNSFSPAMSPAQRERVMSPYSTQSLSPVGKFQQYSP
GSRLMSPVGALKGCDPYLTNKMQPSPGFTLQTPDIMLESNVPLATDFWTESDMLQGTSDL
LTALDDVKLV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaacggtttcgagcagattccgcaggtgtgccctgtcaggggttatgaagac
gcgggatggaattcacagtgccccatggctggtcagtggtcaagacaaatagacacgagt
cagtgcggttatggaaattacaatccgaactttaaaagtccatctgtgcagtgttatagg
aatgctccctacgttccttacggtcatgacaatgtgtttccgtattacccgcctcaggaa
gtgtaccaacaaccagtgccttatgttccgccgttgcctgttccgaatttgccttgccat
ggacagcagccatgggactataataacatgtgcttcgatgtggatggccaaccttgccaa
tataccactgttgtcgatttggaagattttatgaacaatgaaaaacgtaaggagaaatcg
cgcgtggctgcccgatgtcgtcggacgaaggagatgcagatattcgccgagttaacagca
gcgctgcccgcgaggaaagaggatgtggagcagctcgacaaggcctctgtcatgcgtctc
gccatctcatacctgaaagtgcgagacgttgtcaccttgctcccagaaccggagtcagat
catccgaagatccccaaccctaaggacatggatgagctgtccacggagctgtcgtacatg
aaggctttagacggcttcgtgttggtgctctcccagcaaggagacatagtgtactgcagc
gagaatattgctgatcacctcggagtgtctcagatggagataatgggccagagtgtcttc
gagttcagtcacccgtgcgaccacgacgagatacgcgaagctctgcggtccagcagcacg
ggccgccgcgatctgttgctgaggctcaagtgtaccctcaccagtaagggcaggaacgtt
catctcaagtctgcgtcttataaggtgatccacataaccggccacatgctaatgccagaa
gagaactctgaacgcaacaacaatgatgagaagaaacaggatggcgacgacaagaaattg
ccctccaagaacgggtccctcgtggccgtgggcaggccgatcccgcacccctcgaacatc
gagatccctctcgacagcaagactttcctctccaagcacagtctcgatatgaagttcaca
tatgttgatgaagcattgatgaacacgctcggattcgagccggacgagttagtcggccgc
tccgtatacgagtatcatcacgcagccgataccggctcgctggtacagcaattcaaatca
ttattctcgaaggggcaatgcgagacgggccgataccgcttcctcgccaagaccgggggc
tacgcctgggttcaaacccaggccacggtcatcaccgacaagcaacagaaggcgataagc
gtcgtctgcgtcaattacgtcatcagtggcatcgagtgcaaagatgaggtgtttgctgca
caccaggtgcaccacgccgatctgaagcccgtgctggccaacgtagcctctgagcctgcc
gctaacggcgccatcgtcgccattataccgcccgaagaggagcgccctatacccgtcact
gagcttatattcgctccgcgaaagaaagaaatgaacaaaggctttctcatgttctcccaa
gacgagggacttacaagtgagtggcactcgaacttccacagcttagtgcttaaagacgag
ccggaagatctgacacacttggcacctaccgctggcgatgcttgtatccctctagagaat
agtcctttcgacatgttcgacgaattcattctgagcgataattactgcagtctgctagga
gatgatttggctaacggatcaccagtagattccttaacgccagattccttgttgttgtct
tcgccggaacctcaggaaaatgaatcgtcatgcgaacagtcgtcactattaacagaactg
tcactagacgccttcgacagtaataggtcagataatgacatcgatgatgggaactcaccg
ttcatccctacaagtgatgaactgccggtgctggagccggccgtgatgtggggggccttg
cccgacagcgtgagcatggcaaggccacaccccacggagatgcagaccacgtcgccagca
cccgcgctgcaacgcttgctgacggcgaccaccacgggaccaccaccacaagatctcata
accaatatatactccgaccaaggtttaataccaagcagaagtgtagcgtcatgggacacg
ggcgtaaagagagtaatgaagcaagagcaggagccgtgtgcgaagcgcgtgaagcgcagc
ccgtccccggcgcaggcgacgacgccggcgccgtcctcgagcgtcctcatgaacctcctg
gacctgcagcaacaactaccgcagcagaaaccccaaatgcaacccaacttccaactggtt
aggaaccagcaacctatcatgcagaacccgaacatgaacaccatccccctccctgtaata
aacctattacaaggcatgcccaaacagatgctgcactcaaacacgccaatgaacgtggtc
cgcagcaacatcagcagtccgatgtccccgctcagtctgaatgtcagcccgatgtactcc
ttgccatcgagcccaaacagcttcagtccggcgatgagcccggctcagcgcgagcgcgtc
atgagcccctactccactcaatccttatcgccagtggggaagttccaacagtacagtcct
ggcagcaggctcatgtccccggttggcgcgctcaagggctgcgacccttacctcactaac
aagatgcagccgagccccgggttcaccctacagacaccagacatcatgttggagtccaac
gtgcctctagctaccgacttctggaccgagtccgacatgctgcagggcaccagcgacctc
ctcacagccttagatgacgttaagttagtttag
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