Trichoplusia ni (cabbage looper): 113498750
Help
Entry
113498750 CDS
T05757
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
tnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113498750
03460 Fanconi anemia pathway
113498750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113498750
03036 Chromosome and associated proteins [BR:
tnl03036
]
113498750
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113498750
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113498750
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113498750
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113498750
FA (Fanconi anemia) pathway
Downstream FA components
113498750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_OB3
BRCA-2_helical
BRCA2DBD_OB2
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
113498750
NCBI-ProteinID:
XP_026734692
UniProt:
A0A7E5W2F4
LinkDB
All DBs
Position
11:7803750..7816479
Genome browser
AA seq
2407 aa
AA seq
DB search
MTNAIESFEFELKKQSTKTPKTLYNSNKQQNTTIYKPQDVISSVSLQMKAIQVADSLKSG
KCDKKLNQLKKSTFLSVNNLPAYEEVAKQTMKFDTQFATDTQLINVIEDAELIDAHAGMT
EEFDSSFRQAETEDQRDIEEDSRRMKDAESANEALNVNRNDKIASLLQNSIKNDTGIKND
DRVTAMEFKNDVLIIRNKRKLDTDDDDLIDLFDKNDENKGFKHATDEHTQFEEYSQMLNQ
CIEIEDEDIERPLSPIFMQKSKPKSKPSTPLVVSLETFEKFEQIAMPIVESNDINTAKHV
INSQILDNELLIKVNEVLPPDKEKLTNDVNLKFQIDETDDNGKEIKSLIVEDPDLDIQFL
ELDKEISEDLIKKAKTENTEILKDEILFSSDEEEFVQKSYQDLPFTCALATSFYNVKDMD
ETMFVGFQTASNKSIQVFTESFVQAKSLLSNVSERDDDITVTDLVNNCDGNVKSKDVKMD
FIDKETELDLECNDDANDNKELCCEEKEVDLVCTNDATKCEGHRNIDFNGKATRLDSACN
DDDANMLDVQRKADLIDRETEIGLACNIQAVDNMDIDVVIERPVIITKHEIEIKSVSNSN
FQGFKTASNKNIKLSEKALARCNKVFQNIDLNEDFGSQTEEIPKKENKNLINEIINKDEF
ETINEPETKIMKNHTNDIQSIDDVIIQEFENIEMSLEEDGGIRKVETENVVGIKNETDDN
ALEKYQDYVKDIDFDNDFTQVDTNDELSENITEIKTLNERTADAKTAEVIEITSIDTIID
NINSNKPSTSKSFIGFKTANHKNIKISKQALAKTKSIFKNIDSTEPKSLEKLNIEEYNTN
MDKNNIFEGFKTASNRNIIITKEALAKTANIFKDLDSDIIIPEKYEKEDINENIELSAKQ
PSTSKEFLGFKTANNKKITISDAALAKTIDIFKEIDVDCKKDNNFNESSTDLPNFVGFKT
ANNKSIKISETALVKTKNIFKNLDTEDFDFPSKNNEESLKSQKGLTNKFSNDKKKIKKPY
PVEDLDRNKDLNKSLQTIDFNESFTNKARFVGFKTANNKNINISETSIAKTKNIFKDIDD
NVASSKTEEEINKNVANVEIFEEIDDVPPPLGFIGFKTGHNKEIKVLKAALAKTKNIFKD
LNQIKENKSEKDYYPTIIKDVLEANTKINYNEVKSIENTVKEISIPKFQGFTTASNKKVK
ISEEALIKSKNIFKDTDQYEIKIKEKDDYPTIEKDRENKRKDSPLSFQGFTTASNKKVKI
SKQALLKSKNIFKDIESDPNTDVINDPTDKYEHEDREIAKGIENPPKFQGFTTASNRKVN
ISKEALLKTKKIFKDIDNDPNTDFNNDLTNKFEKDGERVTKNDLSDGIDIKNSRSSPIFE
GFKTASKKTVSVSKEAIAKSKELFLEIKEPEFLGFKTASNNKVKISEKALKETRKIFDDE
ILSFKFDKKHHLIEDFSAEMKIQDNDSTKFIKKRNLDIGVKENTDNGAIRNKRCFSEIDT
SEINKEKIIVNEILDTQILNDFEESLHTEDFNKTAVTSKRSGSPILSCPKAKKRKKFVTP
YSQKQPKCFKTVEKINKNVTGINFTEDYKKNKCFTLKDLQKLKQTNSVTTDPYILKFNFE
NLLKFEFINERNNLTDSKLNLHLFKDLFTNSVNNKLIPNGWLDNHFKLILWKLISYEVKF
NLKFNARNVMDQLKFRYDKELYNAQRPVLRKILEKDDVPSKTMVLCVAGVYVDGVSVASA
STTNLELLLTDGWYCIMSTPDKMLAQLVCDGKITVGTKIVTNGAELVNCEQGVSPWEDTS
AVRLKIFGNSTRRARWDARLGYHGNGAILSQLSAVKLDGGKVSKLMVFVTRVYPAMYVEK
FEDGSTVTRSERLEHLHQMKTEAERQGIMEKLYEEVEKEFADQESQDSEGYTDSCNRTCL
DSGSQIAKLMKNSRDPAEFRAHLTSSQTRLLEAHTTKRREHLLEDIQKRIRKKMETAGVN
VNRNVVTLLKIRVAGVEDREKIVVTKGMMSIWKPTEEVQEIIKEGAWIDIMNVVPTAVRY
SEIQISAGRQSIFSASKYKDVEKIKPYTSLLKRKCYTIKDLAQNPAMATDYNEIDTVGMI
FQIDPSISDFDSTKQPFQNVYLADFDKNIICINFWGGLKKFGFHNVLDTGQIVSCVNLQK
RAGNTRKTIPHFRVTEFSYFTKTPKSENARTIVDDLNKMFLSLDRRKFCEQCIEIKNNYS
SNKNNAENISPYRFNNSDYNQSRNKIFIDSPLARPKTDDNFNLTGLDFESTFRQTDTQNL
SEEVLIRKRKVNEKIAKLKMYGEPPPLTNLHIINKSKSASNSYKSPLLTKNNQSKTTHEL
SNSKSDSCVNVANEKNSPENVGDSPVILNRTYVKSIDPVKIDFDVKDDSHVDHFADDFDG
SPPLSLD
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgctatagagagttttgagtttgaattaaaaaaacaaagtacaaaaactcct
aaaactttatataatagcaataagcagcaaaatacgactatatataagcctcaagatgtg
atatcgagtgtttcattacaaatgaaagccatacaagttgcggattctttaaaatctggt
aaatgtgataaaaagttgaaccagttaaagaaatcgacgtttttaagtgttaataactta
ccggcgtacgaagaggtagcaaaacaaacaatgaagtttgacacccaatttgcaacagac
acacaactgataaatgtaatagaagacgcagaattgattgacgcacatgctggtatgaca
gaggaatttgattcctcattccgtcaggcagagacagaagatcaaagggacatagaagaa
gatagtagaagaatgaaagatgctgaaagtgctaatgaagcattaaatgtaaatagaaat
gataaaattgcttctttgttgcaaaattccatcaaaaatgacacaggcattaaaaacgat
gacagagttacagcaatggaattcaaaaatgatgttttgatcattagaaataaaaggaaa
ctggatacagatgatgatgatttgattgatttatttgacaagaatgatgaaaataaaggt
tttaaacatgcaacagatgaacatacacaatttgaagaatacagtcaaatgctaaaccaa
tgtatagaaattgaagacgaggacatagaaaggccacttagtccaatatttatgcagaaa
agcaaaccaaaatctaaaccgtctacaccattagtagttagtctagaaacatttgagaaa
tttgagcaaatagcaatgccgatcgtcgaatcaaatgacataaatactgctaaacacgta
attaattctcaaattctagataatgagctactaattaaagttaatgaggttttaccacca
gataaagaaaaactgacaaacgatgtaaatcttaaatttcaaattgatgaaacagatgat
aatggaaaagagataaaatctcttatagtcgaagatccagacttggatatacaatttcta
gaactagacaaagaaatatctgaggatctaataaagaaagccaaaactgagaatactgaa
atattaaaagatgaaatactatttagttctgatgaagaggaattcgttcaaaaatcctac
caagatctaccatttacgtgtgctctggcaacatcgttttataatgtcaaggatatggat
gagacaatgtttgtggggtttcaaacggctagtaacaagtccatacaagtcttcacggaa
tcttttgttcaagccaaaagcctattaagcaatgtgagtgaaagggacgacgatataact
gtcaccgacttagttaataactgtgatggtaatgtcaaaagtaaagatgtaaaaatggac
tttattgataaagaaacagagcttgatttagaatgcaatgatgatgcaaatgataataaa
gaactttgctgtgaagaaaaagaggttgatttagtttgtactaatgatgcaactaaatgt
gaaggacataggaatatagattttaatggtaaagcaacaaggcttgattcagcttgcaat
gatgatgatgcaaatatgttagatgtgcaaaggaaagcagaccttattgatagagaaaca
gaaattggtttagcttgtaatatacaagcagttgataatatggatatagatgtagtaata
gaaagaccggttattataacaaaacatgaaattgaaattaaatctgtgtctaatagtaat
tttcaaggattcaaaacggctagcaataaaaatattaaactcagtgagaaagctcttgca
agatgtaacaaagtatttcaaaatatagatctaaatgaagattttggatcacaaactgaa
gaaataccgaaaaaagaaaataaaaacttaattaatgaaataattaataaagatgagttt
gaaaccattaatgaaccagaaaccaaaataatgaaaaatcatacaaatgacattcaaagc
atagacgatgttataatccaagaatttgaaaatattgaaatgtcgctagaagaagacgga
ggtataagaaaagttgagacagagaatgttgttggtattaaaaatgaaacagatgataat
gctttagaaaaatatcaagattacgtcaaagatatcgattttgataacgattttactcaa
gttgatactaatgatgaattatctgaaaatattactgagatcaaaacacttaacgaacgt
acagcagacgctaaaacagctgaggtaattgaaataactagtattgatacaataatagac
aatataaattcaaataaaccatcgacaagtaaatctttcattggattcaaaacagctaat
cacaaaaatataaaaatttcaaaacaagccttagctaaaacaaaaagtattttcaaaaat
attgactctacagaaccaaaatcacttgaaaaattaaatatagaagaatataatactaat
atggataaaaataatatttttgaaggtttcaaaactgcaagtaatagaaatattattatc
accaaagaagctctcgctaaaacagccaatatatttaaagatctagattcagatataata
atacctgaaaaatatgaaaaagaggatataaatgaaaatatagaattgtcagctaaacag
ccatcgactagcaaagagtttttaggttttaaaactgcaaataataaaaagattaccata
tctgatgcagctttagctaaaacgatagatatatttaaggaaattgatgttgattgtaaa
aaggacaacaattttaatgaatcttctactgatttgcctaattttgtcggatttaaaacg
gctaataataagagtataaaaatatctgaaacagctttagttaaaacgaagaatattttc
aaaaatctagatactgaagattttgattttccatcgaaaaataatgaagaatctttgaaa
agtcaaaaaggacttactaacaagttttctaatgataaaaaaaaaattaaaaagccttat
cctgtagaagatctagatagaaataaagatttaaataaaagccttcaaacaatcgatttc
aatgaatcatttacaaacaaagcaagattcgttggcttcaaaacagctaataataaaaat
atcaatatatcagaaacttctattgccaaaactaaaaacatatttaaagatattgatgat
aatgttgctagttctaaaacagaagaggagattaataaaaatgttgccaacgttgaaatt
ttcgaagaaattgatgatgtaccaccacctttaggttttattggatttaaaactggtcat
aataaagaaataaaagttttaaaagcagcgttagctaaaactaaaaatatatttaaagac
ttaaatcaaattaaagaaaataaatccgaaaaagattattatcctactattattaaagat
gtacttgaagcaaatacaaaaattaattataatgaagtcaaaagtattgaaaatacggta
aaagaaatctcgattccaaaattccaaggtttcactacagccagtaataaaaaagtcaaa
atctcagaagaagcattaattaaaagtaaaaacattttcaaagatacagatcaatatgaa
ataaagatcaaagaaaaagatgactatcctactatagaaaaagatagagaaaataaaagg
aaagatagtccacttagtttccaaggatttaccacagcgagtaacaaaaaggtaaagata
tcgaaacaagccttacttaaaagtaaaaatatatttaaagatattgaaagtgatccaaat
actgatgttattaatgatccaaccgacaaatatgaacatgaagatagggaaatagctaaa
gggatagaaaacccacctaaattccaaggatttaccacagcaagtaatagaaaggtaaac
atatcaaaagaagccttactaaaaactaaaaaaatatttaaagatattgataatgatcca
aatacagattttaataatgatctaactaacaaattcgaaaaagatggtgagagagtaact
aaaaatgatttatctgatggtattgatatcaaaaattctagatccagtcctatttttgaa
ggtttcaaaacagcaagcaagaaaacagtttcagtatcaaaagaagcaattgcaaaaagc
aaagagctatttctagaaattaaagaacctgaatttctaggttttaaaactgcaagtaat
aataaagtgaaaatatctgaaaaagcgctgaaagaaactagaaaaatatttgatgatgaa
attcttagttttaaatttgataaaaaacatcatttaattgaagatttttcagccgaaatg
aaaatacaagataatgatagtactaagtttattaaaaaaagaaatttagatataggtgtt
aaagaaaatacagataatggtgcaataagaaacaaaagatgtttttcagaaatagataca
tctgaaattaacaaagaaaagataattgttaacgaaatattggatacgcaaatactaaat
gactttgaagaaagccttcatactgaagattttaacaagacggcagttacatcaaagaga
tctggcagcccgatcttatcttgccctaaagctaaaaaaagaaagaaatttgtcacacca
tattctcaaaaacaaccaaaatgttttaaaacagtcgagaaaattaataaaaatgtcaca
ggaattaatttcacagaggattataagaaaaataaatgttttactttaaaagatttacaa
aaattaaaacaaacaaactctgttactactgatccttatatactaaaatttaactttgaa
aatttattaaaattcgagtttataaatgaaagaaataatttaactgattcaaaattaaat
ttacatttattcaaagatctatttacaaattcagttaataataaactgatacctaacggt
tggttagataaccattttaagttaattctctggaagttaatatcttatgaggttaaattt
aacttgaagttcaatgcaagaaatgttatggatcaattgaaattcagatatgataaagag
ttatataatgctcagaggccggttttaaggaaaattttggaaaaagatgatgtcccatct
aaaactatggtgttgtgtgtcgctggggtctatgttgatggagttagcgttgccagtgca
tcaacaacgaatctagaacttctactaacggatggctggtactgcatcatgtctactccg
gacaaaatgttagcacagttggtctgtgatggcaaaatcactgttgggactaaaatcgtc
accaacggggccgagttggttaattgtgagcaaggagtctcgccttgggaggatacatca
gcggtccgtctaaagatcttcggcaactcgacccgccgcgctcgctgggacgcccgcctc
ggttaccatggcaacggcgccatcttgtcgcagctgtcagctgtcaaactggatggcggg
aaagtgtcgaagcttatggtttttgtgaccagagtctatccagctatgtacgttgagaaa
tttgaagatgggagtactgtgacaagatcagaacgtttagaacatttgcatcagatgaag
acagaagcagaaaggcagggcatcatggagaagttatatgaagaagtggagaaggagttc
gctgatcaggagtcgcaggattccgaaggctatacagattcttgcaatagaacatgtctg
gacagcggctcgcaaatcgctaaactgatgaagaacagccgagatccagctgaattcaga
gcacacttaacatcatcccaaacccgtctcttagaagcccacacaacgaaacgcagggaa
catcttctagaagatatacagaagagaattagaaagaagatggagacagcaggtgtgaat
gtaaacaggaacgtggtaacgttgttgaagataagagtggctggtgtagaagatagagag
aaaattgttgtgactaaaggcatgatgtcaatatggaaaccgacagaggaagtacaagaa
atcattaaagagggcgcttggatcgatattatgaacgtagtacccacagctgttagatac
tccgaaattcaaatatcagccggcagacaatcaatattcagtgcttcaaaatacaaagac
gtagaaaaaattaaaccatacacaagtctacttaaacgcaaatgttacaccataaaagat
ctagcccaaaacccagccatggccaccgattacaacgaaatcgataccgtaggcatgata
tttcaaatcgatccatcgatttcggacttcgattcgactaaacaacccttccaaaatgtt
tacttagctgattttgataaaaatataatctgtataaatttttggggaggactaaagaaa
tttggtttccataatgttttggataccggtcaaatcgtctcctgtgtgaatttacaaaaa
cgggctggcaacactaggaaaactataccgcattttcgcgtaactgagttctcgtatttt
acgaagacgccgaaaagtgaaaatgctagaacaatagttgatgatttaaataaaatgttt
ttatcactcgatcgaagaaaattctgtgagcaatgtatagaaattaaaaataactattcc
tctaacaaaaataatgctgaaaatatatccccttatagatttaataatagcgattataat
cagtctagaaataaaatatttatcgattcgcctttagctagaccgaaaacggatgacaat
ttcaacctaaccggccttgattttgagtctacattcagacagacagacacacaaaatcta
tcagaagaagtcttaattagaaagcgtaaagtcaacgaaaaaatagctaaattaaaaatg
tatggggaaccaccgccattgaccaatctacatattataaataaatcaaaaagtgcttcg
aattcatataaaagtcctttattaactaaaaacaatcaatctaaaacaacacacgaactg
tcaaactcgaaatctgacagttgtgtgaatgttgccaatgagaaaaattctcccgaaaat
gtgggagatagcccagtgattttgaatagaacttatgtaaaaagtatagatccagtcaaa
attgattttgatgtgaaagatgatagtcatgttgatcattttgctgatgatttcgatggc
agtccgcctttgagtctagattaa
DBGET
integrated database retrieval system
