Trichoplusia ni (cabbage looper): 113498912
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Entry
113498912 CDS
T05757
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-A-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113498912
03015 mRNA surveillance pathway
113498912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113498912
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113498912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113498912
NCBI-ProteinID:
XP_026734964
UniProt:
A0A7E5W2Y7
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All DBs
Position
11:3164593..3167017
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AA seq
294 aa
AA seq
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MARPKSPSAASEKEKKKPKENKKKKGDSGSSSSDSSGSSSESSSSRSSSRSSSSSSGSSS
RSSSSSSSSSSSSSNNDRSRPKKKISPNKSPVKDRREPDRDKVRDRSPLTDKKKLAAPSA
NDKGKSKEKHDRSPGRKKRERSPPPRPTRIHIGRLTLNVNRDHIHEIFSTYGTVKAVEFP
MDRLHPHNGRGYAYVEFSNADEAENAMKHMDGGQIDGQEITAAPVLVPSRPRRPSPRPPP
PRHAPPRRHSPPRYRRRSPMPRRRSPPRRRRSRSRSPRAAPRRRRSRSSSSSSR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctagaccaaagtcgccatcggcggcttccgaaaaggagaaaaagaaaccaaaggaa
aataaaaaaaagaaaggtgattcaggatctagcagcagcgacagtagcggcagttcatca
gagagcagttcatcccgttcttcatctcggtcatcttcaagcagttctggaagctcttct
cggtcatcttcctcgtccagctcctccagcagcagcagtagtaacaatgaccgctccaga
ccaaaaaagaagatttcacctaacaagagtcctgtaaaggatcgccgtgagcctgacaga
gataaagtaagagacaggtctcccctcactgacaagaaaaagttggccgcaccttcagca
aatgacaagggaaagagcaaggaaaagcatgataggtcacctggtcgcaaaaagcgtgag
cgttccccgccacctcgaccaacaaggattcatattgggcgtttgacattaaatgtgaac
agagatcatatccatgagatattctccacatatggtactgttaaagcagttgagtttcca
atggatagattacatcctcataatggacgaggatatgcgtatgtcgagttcagtaatgct
gatgaagctgagaatgctatgaagcatatggatggaggtcagatcgacggtcaggaaatt
acggcggccccggtgttggtgccttcgcgtccgcgccggccgtcgccgcgaccgccgccg
cccaggcacgccccgccccgacgacactctccacctcgctacaggcgccgcagcccgatg
cctcgccggcgctccccgccgcggcgacgccgctcgcgctctcgctcgccgcgcgctgcc
ccgcgccgccgccgctccaggtcctcctcctcctcctcccgataa
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