KEGG   Trichoplusia ni (cabbage looper): 113499040
Entry
113499040         CDS       T05757                                 
Name
(RefSeq) THO complex subunit 4 isoform X1
  KO
K12881  THO complex subunit 4
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03013  Nucleocytoplasmic transport
tnl03015  mRNA surveillance pathway
tnl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113499040
  09122 Translation
   03013 Nucleocytoplasmic transport
    113499040
   03015 mRNA surveillance pathway
    113499040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113499040
   03041 Spliceosome [BR:tnl03041]
    113499040
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113499040
    TREX complex
     113499040
Spliceosome [BR:tnl03041]
 Complex C
  Other components
   EJC/TREX
    113499040
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113499040
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 113499040
NCBI-ProteinID: XP_026735169
UniProt: A0A7E5W3G4
LinkDB
Position
11:9338790..9341052
AA seq 272 aa
MVDQIEMALDDIIKANKTTRGGGGAGRKFVNRRPGGGRGGGGAGGAFRNGRTGGVLRGRN
RGGISKSTNYTRDHLFQGDVNSTWKHDMFNDSGERKIQRNAMSAITTGPTKLLVSNLDFG
VSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDGRAM
NIQLATSEISSFRSDDRIRVGGGGGNAGGGPPRRNPSRGGGANRNQGGGGGGSRGGNSRR
GRGGAGAGRGKRPVPTAEQLDAELDAYVKEIK
NT seq 819 nt   +upstreamnt  +downstreamnt
atggttgatcaaattgaaatggcattagacgatatcataaaagcaaataagaccaccaga
ggaggtggtggagctggaagaaaatttgtcaacagaaggcctggaggtggccgcggaggt
ggaggcgctggaggtgccttccgaaatggccgtacgggtggcgtgttacgtggtagaaat
cgtggcggtatatccaaatcaacaaattacacaagggaccacctatttcagggcgatgtt
aacagcacatggaaacatgacatgttcaatgattctggtgaaaggaagattcaaagaaat
gccatgtcggctatcacaactggtcctactaaattattagtgtcgaatctggattttgga
gtatcagattctgacatacaggagctgttctcggaatttggcattttgaagagtgccgct
gtacattatgaccgatcaggaagatctttaggtactgctgatgtggtcttcgaaagaagg
gctgatgctttaaaggcaatgaaacagtataacggtgtaccactggacggaagagctatg
aatatacagttagccacatcagaaattagcagttttagaagtgacgacagaatccgtgtt
ggtggtggtggcggcaatgctggtggaggaccacccaggagaaacccaagcagaggaggt
ggagcaaacaggaaccagggtggaggtggcggtggatcgcgtggcggcaacagccgtcgt
gggcgcggcggggctggtgctgggcgaggcaagcgccctgtacccaccgctgagcagtta
gatgcagagttggatgcctatgtcaaagaaatcaagtga

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