Trichoplusia ni (cabbage looper): 113499164
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Entry
113499164 CDS
T05757
Name
(RefSeq) putative transcription factor capicua isoform X1
KO
K20225
capicua transcriptional repressor
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
113499164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113499164
Transcription factors [BR:
tnl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113499164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113499164
NCBI-ProteinID:
XP_026735315
UniProt:
A0A7E5W3W3
LinkDB
All DBs
Position
12:complement(2714633..2744801)
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AA seq
1759 aa
AA seq
DB search
MQRAHAGGAPHAQASATAHPHVRTHNSYADIDDQIPASVISSVGTVSLSQSSTHPTPNIT
MANPTNLGNASSGNAQPAAQQTPTQAPVRNLPKKRKFDPSVLEEMNCGNNNTVNAPLPVE
YQPHYQQPVMQPSPIVQHPSPPSEMKSYISYPNIDLSEWRDHRVLAKQRGLYVPGVIRQA
EGCKVVVEFDGLENDPVEYSDVFGMNKNDVISDASPQMSHLHMGSLCVVRTTDPSRENVQ
NVFVEGLVYEVLNSPIRIRVKVSDGDLCKEMVEVKRADIRLLQPPWADELEDAGTHAAST
LHPAMRIHHVPTQMGGDNFYTSSPMPGAGAGGVVTVGALSNGSMDDLRKRAFDDYGESDD
DLRREDIMFPADVSHMDCSNSKRSSLQSRGSTSSLLERSLTPRSQPPTPRSQAATPHKYK
KGDVVSTPTGIRKKFNGKQWRRLCSKDGCTKESQRRGFCSRHLSLRGVTRSSNTPLAQGS
AHTPQQRSSSKSLSSSGTGVEGDETSRESDTTPPHYRVTGRFDSDETEAANMLVSLGSSR
SGSPGASPVGGGGSPGLRNNLFVPISSPQPQPHHPAALYHHHLIRPELVRPSRVNSPASV
ATSVIRVSPGPNYHYQTFVSQVENRNGPTIVQTNNVSQSNVIGVQTSGLNLQNTIHTSIN
ATTTTLSSLTLPSSISLNLNNINTQSLQTSIANTIRSTNDLAHNLIVPRAIPTSNGIDVE
PIYRQPIHQRNGIHDQYRRDTEMSPPLNNHENFLNRRVSEYDDEDHSASQRENNILRNVI
DNRPPELSEARVIEEKQRILKPAPLQARLLSVLEPDVKDPVKRYYVTMVPQNTAEKKYVF
IKNEPAETVQIEQRLNHLTQQINNNDSEPEHRSLDNGDHVNNVNSAVIVHPNQLLPVLPP
PTSHTIIVSGNTFPWQSLVPLLSGSPPPSAGAAPAPAAPPSPRTPRTPRTPHTPHTPHTP
APLIKTEDQIKTEAGDPPMCTDEDDEVFESEDSGTGGDDSTKRPSQNTSALNSPATQEKK
ERRIRRPMNAFMIFSKRHRQIVHQMHPNQDNRTVSKILGEWWYSLKPEEKQKYNELASEV
KEAHFKAHPEWKWCNKDRRKSSSSKDPTGSMPQSPRTPSEVGLSGALSASSDLPVPVASY
NHIGSPQLSDDEQMPSQPEEPPPAVQSIEIDLKCGEKVTDSDSEGLDTRDYLPSHHDHTR
RPKPIKARAGSSDNLLGGITASSPGGPKGFQPTGGAFKSTHADTNENHRQWTAFTQLSKP
QAVASSPQAAGAAGAAGAGGASAHSLSHSVQGISLGTPNLSAQAALDNAIASIMNSPTST
CGVQVISSGMSNTISTPTSTPLTTPLANPVLKSFTIVKRSIGDNSPCPLTLSLDASGNLL
LKPSQSSDSPASDQSMHCVHLQRLYVPTFNTEVETPKSTPQPAQSVQAAQSVIVSQSNTN
TAPKPATQWHSSVEETRPFPLAPTPAQLGRAPLQKRLSRGTSTGSTGSEPATSAAGGSGA
LARHDAGGAASSDDAASPKHCDLPSPSHKKSLFKKRNEDGRDKVLETVNFEQKFSTLPQF
KPEACSPSAMVVPRSPQLYTMRKKHSKMEDEPTVVTPQLEPEVMNGNGMPTPHSYGTPHT
TTNKLVGNTFFGPDFNLDTYRVSSEGLEEMSPRTPCSAGGAAGAARGEAGHRRVLEQRRH
LVLKLFQEHGMFPTTQATTHFQATHMDIFPTKMALQLKIREVRQKLMAQSNLTPHSEVNT
PTINSPIASAPLQPTSTAS
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagcccacgcgggcggcgccccgcatgcgcaggcctccgccaccgctcacccg
cacgtacgcacgcacaactcttacgcagacatcgatgatcagatccctgcttcagtgata
agcagtgtgggcacagtgagcctgtctcaatcatcgacccatcctactccaaatataact
atggcgaatccaacgaaccttggaaacgctagcagcgggaatgcccagcccgctgcgcaa
cagacaccaacccaggcaccagtacgcaacctgcccaagaaacggaaattcgatccctcc
gtgctagaagaaatgaattgcggaaacaataacacggtgaacgctcctctgccggtggaa
taccaaccgcattaccaacaacccgtcatgcagccatccccgatagtccagcacccatct
cctccatccgagatgaagtcttacatctcctacccaaacatcgacctgtccgagtggcgt
gatcacagggtactcgccaaacagcgcggcctctacgtcccaggagtcatccgtcaggcc
gaaggttgtaaagtggtagtggagttcgacgggcttgagaacgaccccgttgaatatagt
gatgtgttcggtatgaacaagaacgatgtgattagtgacgcgagcccgcaaatgagtcac
ttgcatatgggctcgctgtgtgtcgtgaggactacggaccccagccgggagaacgtgcaa
aatgttttcgttgaaggcctcgtatacgaagtgcttaattctcccatcagaatacgagtt
aaggtatcagacggcgacctctgcaaggagatggtggaggtgaagcgagcggacatcagg
ctcctgcagccgccctgggctgatgagttagaagacgctggaactcacgccgcgtccacc
ctgcacccggcgatgcgcatacatcatgtgcctacacagatgggtggcgacaacttctac
acatcatcaccgatgccgggcgcgggcgctggcggcgtggtgaccgtgggcgcgctgtcc
aacggctccatggacgacctgcgcaagcgcgccttcgacgactacggcgagagcgacgac
gatcttcgccgggaggacatcatgttccccgctgatgtctcacatatggactgcagcaac
agcaaacgcagtagtcttcagagccgaggaagcacctccagcttgttggagcgcagcctc
acacccagatctcaacctcccactcctagatctcaagcggcgaccccgcacaaatataag
aagggcgacgtggtgtctactcccactggcatccgtaagaagttcaacggcaagcagtgg
cggcgcctctgctccaaggacggctgcaccaaggagagccagcggcgcgggttctgttca
aggcatctgtcgctacggggcgtgaccaggtcctcaaacactccgctagctcaaggctct
gctcataccccgcagcagaggagtagcagtaaatccctatcatccagcggcacgggcgtc
gaaggtgacgagacatcacgagagtccgacaccacgccgccgcactaccgcgtcactgga
cgctttgactcagatgaaactgaggctgctaatatgctggtgtcgctgggcagctcccgc
tcgggcagcccgggcgcgtcgccggtgggcggcggcggctcgccggggctgcgcaacaac
ctgttcgtgcccatctcctcgccgcagccgcagccgcaccatcccgccgcgctctaccac
caccatctcatcaggcctgaattagtacgacctagccgtgtcaactctccagccagtgta
gcaacaagcgtgatccgagtttcgccaggaccaaactaccattatcagacatttgtctct
caggtggagaacaggaatggtccaacaatcgttcagacgaacaacgtatcccagtcgaac
gtcattggagtccagacatcgggactcaatcttcaaaacacaattcacaccagcataaac
gctactacaacaactctgtccagcctgacattgccatcgagtatatcccttaacttgaat
aacattaatactcaaagtttgcaaacaagtattgcgaacacaatccgcagtaccaacgac
ttagctcacaacttaatagtcccgagggccataccaacttcaaacgggattgacgtagaa
ccgatataccgtcagccgatacaccagcggaacgggatacacgaccagtaccgccgcgac
accgaaatgtcgccgccattaaacaatcatgaaaattttctgaataggagagtctcggag
tacgacgacgaagaccattcggcgtcgcagagagagaataatatacttcgtaatgttatt
gataatagacccccagagctatccgaggctcgtgttatagaggagaaacagaggatcttg
aagccggcgccgctgcaggcgcgcctgctgtcagtactggagcctgatgtcaaggaccca
gtgaagaggtactatgtgaccatggtgccgcagaacactgctgaaaagaagtacgtgttt
attaagaacgaaccggcggaaactgttcaaattgaacagaggctgaatcatctgacacaa
caaatcaacaacaacgattcggaacccgaacaccggagcttggataacggtgatcatgta
aacaacgtgaacagcgcggtgatcgtccacccgaaccagttgttgccggtattgccgcca
cctacgtcacacacgattatcgtgtcgggcaacacgttcccgtggcagtcgctggtcccg
ctgctgagcggctccccgccgccgagcgcgggcgcggcgccggccccggccgcgccgccc
tcgccgcgcacgccgcgcacgccgcgcaccccacacacgccgcacacgccgcacacgccg
gcgccgctcatcaaaactgaggaccagatcaagacggaggctggcgatcctcctatgtgc
actgatgaagatgatgaggtatttgaaagcgaagactctgggaccggcggcgacgactct
accaagagaccctcgcaaaacacatcagcgctcaactctcctgctacacaggaaaagaag
gagcgccgtatccgccggcccatgaacgcgttcatgatcttctcgaagcgtcaccgccag
atcgtgcaccagatgcacccgaaccaggacaaccgcaccgtcagcaagatcctcggcgag
tggtggtactcgctcaagcctgaggagaagcagaagtacaatgagctggctagcgaggta
aaagaagcccacttcaaagcgcatccggaatggaaatggtgcaataaagaccgcaggaag
tcgtctagcagtaaagatccaactggatccatgccacagagtccacgaactccgtctgaa
gtgggtctcagcggtgctctgtcagctagttcagacttgcccgtgcctgtggcttcgtac
aaccacatcggatcgccgcagcttagcgacgatgagcaaatgccatcgcaaccagaagaa
ccgccccctgcggtccagagcatagagatcgatctcaaatgtggtgagaaggtgaccgac
tcggactccgaaggactggataccagggactacttgccgtcgcatcacgaccacacccga
aggcctaaacctattaaagctcgcgctggatcgtctgacaatcttctgggcgggataact
gcgtccagtccaggaggacctaagggcttccaacccactggtggtgcatttaaatccact
cacgctgatacaaatgagaaccacaggcaatggacagcattcacgcagctgagcaagccg
caggccgtggcgagctccccgcaggcggcgggcgcggcgggcgcggcgggcgcggggggg
gccagcgcgcacagcctgtcgcacagcgtgcagggcatctcgctgggcacgcccaacctg
tcggcgcaggccgcgctcgacaacgccatcgcttccatcatgaactcgcccacctccacg
tgcggggtgcaggtaatatcgagcggcatgtccaacacgatctcgacgccgacgtccacg
ccgctgacgacgcctctcgccaaccccgtgctgaagagcttcactatcgtcaagaggagt
attggtgataactcgccctgtcctctcaccctgtcgctggacgcgtccggcaacctgctt
ttaaagccgagccaatcgtcggacagtcccgcttcagaccagtcgatgcactgcgttcat
ctacaaagactttatgtgccaaccttcaatacggaagtagagaccccgaagagtaccccc
cagcccgcgcagagcgtgcaggccgcgcagtccgtcatcgtgtcgcagagcaacaccaac
accgcgcccaagcctgccacccaatggcattcatctgtcgaagaaacccgtccattcccg
ttagcaccaactccggcgcagcttggcagagcgcctttacagaagagacttagtcgaggc
acgtcaacaggctcgacgggcagcgagccggccacgtccgcggcgggcggcagcggcgcc
ctcgcgcggcacgacgccggcggcgccgccagctccgacgacgcggcctcgcccaagcac
tgcgacctgcccagcccctcgcacaagaagagcctcttcaagaagaggaatgaggacggc
agggacaaagtgttggagacagtgaactttgagcagaagttcagcacgttgccgcagttc
aagcccgaggcttgcagcccgagcgctatggtggtgcctaggagtccgcaactttatacc
atgaggaagaaacacagcaaaatggaagatgagcctacagtagtgacgccgcagctggag
cccgaggtcatgaacggcaacggcatgcccaccccgcactcgtatggtacgccgcataca
accaccaacaagctggttgggaacactttcttcggaccagatttcaatctggatacttat
agagtgtcgtcggagggcctggaggagatgtccccgcgcacgccgtgctcggcgggcggc
gcggcgggcgcggcgcgcggcgaggcgggccaccgccgcgtgctggagcagcgccgccat
ctcgtgctcaagctgttccaggagcacggcatgttccccaccacgcaggccaccacgcac
ttccaggctactcacatggacatattcccaacaaagatggctctgcagctaaagatacgc
gaagtgcggcagaaactgatggcccagtcgaacctcacgccccactccgaagtcaatacg
ccaactataaattctccaatcgcgtccgcgcccttgcagccgacgtcgacggccagttag
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integrated database retrieval system
