Trichoplusia ni (cabbage looper): 113499171
Help
Entry
113499171 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113499171
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113499171
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113499171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
SNF2-rel_dom
KH-I_KHDC4-BBP
KH_2
P-loop_SecA
KH_PNO1_2nd
KH_KhpA-B
YmtS_Ross
MOEP19
Motif
Other DBs
NCBI-GeneID:
113499171
NCBI-ProteinID:
XP_026735332
UniProt:
A0A7E5W479
LinkDB
All DBs
Position
12:complement(2781291..2784652)
Genome browser
AA seq
674 aa
AA seq
DB search
MAEWEEDWTPEPANVVPAATAPAPQTRQYRGRTFRGRGSSSYNDTNWRERGNNSGGDYRR
NNDRDGGGGRRDYQQRDSGNKKVIYVPSHKVGRIIGKGGCKIKDIQYESEAKIKIGDSSG
NEADITLMGSDTAISKAEDLINGLIEDYKPQSERREETHNASDSSGQSSDFFKTSEDGAQ
VIDWEKLNAYHTEHQQSRYEKLQPIVKDFYREDPEIAAMTPAEVTRWRQENFDIQVKRTF
DEKPGLRPIPNPVLTFEQAFQDYPEILEEIYKQDFKQPSPIQSQAWPILLRGDDLIGIAQ
TGTGKTLAFLLPALIHIDGQTIPKEEREGPTVLIMAPTRELALQIDKEVSKYQYKGIKSV
CLYGGGDRKEQIKVVAKGVDIVIATPGRLNDLVMARHLNIINFSYIVLDEADRMLDMGFE
PQIRKSLFDVRPDRQTVMTSATWPPGVRRLAESYMKDPIQVNVGSLDLAAVHTVTQKIMF
VEESEKEETLFEFLQNMEPTDKVIIFCGKKATATHITTELCLKGIECQSLHGDRDQIDRE
AALSEMVDGTVNILVATDVASRGIDIKDLTHVINLDFPRHIEEYVHRVGRTGRAGKTGIS
LTFISRNDWGNARELIKILSEANQEVPEELEQMATRFEAMKLRRDKERGEGTGRGRGGRG
GGGGFGGRGRRDRW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatgggaagaagattggactcctgagccagccaacgtagtacccgcggcaaca
gctcccgcccctcaaactcgtcaataccgcggtaggacattcagaggaagaggatcgagc
tcttacaatgatactaactggagagaacgtggcaacaatagtggcggtgattaccgccgc
aacaacgaccgtgacggcggcggtggtcgacgcgattatcagcagcgagactccggcaac
aagaaagttatttatgtaccatcgcataaagtaggccgcattataggcaaaggtggttgt
aaaatcaaagacattcagtatgagtctgaagcaaaaattaaaattggcgattctagtggc
aacgaggccgacataaccctgatgggttctgataccgctatttccaaagctgaagacctg
atcaatggtctaattgaagactataagcctcagtctgagaggcgggaggagactcacaat
gcgagcgacagcagcggacaatcctcagacttctttaaaacttctgaggatggtgcccag
gtcattgattgggagaaacttaatgcatatcatactgaacatcagcaaagcagatatgag
aaactgcagccaattgttaaagatttttacagagaggatcctgaaatagctgctatgaca
cctgctgaagtaactcgttggaggcaggagaactttgatattcaagttaagagaacattt
gatgaaaaacctggactaagacccataccaaatccagttttaacatttgagcaagctttc
caggattacccagagattttggaggaaatctataagcaagactttaaacaaccatcgcca
atacaaagccaggcctggcctattttgctcagaggcgatgacttaattggcatagcccaa
actggtacgggtaaaaccttagcattcttgttaccagcactcattcatattgatggacaa
accataccaaaggaagaaagggagggcccaactgtgctcatcatggctccgacaagagaa
cttgcattgcaaattgacaaagaagtgtccaagtaccaatacaaaggtataaaatcagta
tgtctgtatggaggaggtgaccgcaaggagcaaattaaggttgtggcaaaaggtgttgac
attgttattgctactccaggcaggctcaacgatctggtgatggctcgacacttgaatatc
attaacttctcatacattgtcttggatgaagctgacagaatgttagatatgggttttgag
cctcaaatacgaaaatcattatttgatgtgaggcctgatcgtcaaactgtaatgacatcg
gccacctggccacctggtgtacgtcgtctggccgaatcttacatgaaggatcccattcaa
gtgaatgttggctctctagatcttgccgcagtacatactgtcacacagaaaataatgttt
gttgaagaatctgaaaaagaagagaccttgtttgagtttctgcaaaacatggaaccaact
gacaaagtcatcatattttgtggtaaaaaagcaactgctacacatattactacagagtta
tgtcttaaaggcatagaatgccagtcattgcatggcgaccgcgatcaaatagatcgtgaa
gccgctttaagcgagatggttgacggcaccgtcaatattttggtagccactgatgttgcg
tctcgaggtattgacattaaagacctaactcacgtcatcaatttggatttcccgcgtcat
atcgaagagtatgtccaccgagtcggtaggacagggcgcgcagggaaaacaggaatctct
ttgacatttatctcgaggaatgactggggcaatgctagagagctgatcaaaattctctcg
gaggctaatcaggaagtccctgaagaattagagcaaatggctacaagatttgaagccatg
aagttacgacgagacaaagagaggggtgaaggaacgggccgcggacgcggcgggcgtggc
ggcggcggcggcttcggtggccgcggcaggagagaccgctggtaa
DBGET
integrated database retrieval system
