Trichoplusia ni (cabbage looper): 113499178
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Entry
113499178 CDS
T05757
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113499178
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113499178
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113499178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
AAA_30
PhoH
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
113499178
NCBI-ProteinID:
XP_026735346
UniProt:
A0A7E5W540
LinkDB
All DBs
Position
12:9822868..9851596
Genome browser
AA seq
2182 aa
AA seq
DB search
MIELPRITRALRAHTQLDKPRCLKPTADPTKPVLLKKKSLQRFKSYTDIYKYVKENEPNS
NEILTLFDQLKEACKPLTKDQPDEVIDDAAVLTLRMFLDQDIVMLKHMSQLRQTFGQVMS
TTANKICEIVTQISEQLNETTKEYIRKEESESNKENIKLWGEHIQCHYIPYKPAKKPLAK
LTSKPATASAFVTDFSMKYNSQAPSSSNQTKVPIAPIESKFGKTWLETKVKEQYENTSGI
SSVDILQSVITLLNSPRTNDEMQNDLFELLGFDKFEFIQDILEHRQDIINSLKAPPPGPT
LSEIAAILPENKMPQYLCQVSVLSEQEKMLAKLVRKEEKKAKNRKVEEDDEDQEINIAQL
RSKRLAELSKPVVPFSTSRSANIDPILQKISYFQTKVQYPNVYDSALEAKNSAGFVSGLK
LILPENAIKKDSKEYEEIIIPKNDPPPLTIGNQRVPVAELDEIGQMAFENIKELNRIQSV
VFQTAYHTNENLLICAPTGAGKTNIALLTVVHQIKQHIENNVIMKNKFKIIYIAPMKALA
SEMTASFGRRLRGLGILVRELTGDMKLTKAEVQQTQMIVTTPEKWDVVTRKGATDTELAS
IVKLLIIDEVHLLHGDRGPIVEAIVARTLRQVESTQNMIRIVGLSATLPNYVDVARFLRV
NPNIGLFYFDSRFRPVPLEQQFIGVKESGSGGGAHLRMIQSMNEICYDKAVDMVQKGHQV
MVFVHARNATHQTAMVLKELAQKKGHLKHFEPDDTGAFLKAKKSIGSSPNKLLAELFASG
FACHHAGMLRSDRNMVEKYFAEGFIKVLVCTSTLAWGVNLPAHAVIIRGTEIYDQSHGTF
VDLSILDVLQIFGRAGRPQFDTSGTGIIITTHDKLTHYLKSMTNQFPIESNFINLLADNL
NAEVALGTVTNIDEAVEWLSYTYLFVRMRINPQVYGLTYSDVQEEPMLETKRRELITSAA
MRLDNTQMIRYNERTGHLNVTDLGRTASHYYITSETMDVFNSMVRKSMTQGYVLEMLTRC
SEFQQLKIRKEELTELWNLKNQFCELRIEDPPEDIHWKINILLQTYLSRGRVSGSSLQSD
LNYISQNAVRIIRALFEITLRKNNAYMAGLYLKMAKMLELQQWDFYSDMRQFNCFTIETL
KHIEYPMLKPDQIRDMDWKEVGDLIRNPKNARHLKKCADEFPLLEMEASLHPITRTVLRI
RLTIIPNFKWNDKYHTKAPEAFWIWVEDPDTDIMYYHEYFLITKKQVITREPQELVITIP
ISEPLPPQYYIRATSERWLGSESVLPLTFQHLILPETHPPHTDLLELQPLPVTALKDPSY
EMLYNFSHFNPIQTQIFHCLYHTDHNVLLGAPTGSGKTIVAEVAMFRVFNQYPECKVVYI
APLKALVKERIKDWKVRLEQNLGKRVVELTGDVSPDIRAIRNSHVIVTTPEKWDGISRSW
QTRNYVQDVALVVIDEIHLLGEDRGPVLEVIVSRTNFIESHTSRRLRIIGLSTALANAKD
LANWLNIGEMGLYNFRPSVRPVPLEVHISGHPGRHYCPRMMTMNKPTFQAIRTHSPCAPA
LVFVSSRRQTRLTALDLIAYLAAEDNPKQWLHMHESEMEQILANIRESNLKLTLAFGIGI
HHAGLHERDRSTVEELFINQKIQVLICTATLAWGVNFPAHLVVIKGTEYYDGKQKRYVDM
PITDVLQMMGRAGRPQYDNEGVAVVLVHDQKKNFYKKFLYEPFPVESSLLDVLPDHLNAE
VVAGTVQTKQDILDYMTWTYFFRRLLKNPSYYNLESVEPQDVNYYLSNLVQSSLDVLADA
NCLEIEEDLRTVHCTWMGRIASYYYLSYKTMAHFTRNLQYNMNIDELLRVLSDCEEYATL
PVRHNEDLLNGELSKQCRLPVDALSLDSSNVKAFLLLQAHMTRLLLPNTDYLTDTKSVLD
QTIRILQAMIDTSAENGWLAVCLSCQMLMQGIVQARWPTESPLTTLPYVDSQHLYMFSHM
SRDTDRPCMMLNGLKVACARNYELLAKYLRKEFEENQIEQIYTAICDMPTLDIKIRIRGL
WMDRDNVQEKLIHENPSKDNWMPLHADQEYTLRLELNRRGGNPNNVFCPRFPRGKNEGWI
VTVGTVDDGELHALKRVPPKGNPQVNLHTPSTLGRIIYTIYIMSDSYMGLDQQYDMQFEI
LPPLPEEKVERVYHDIEKVFLE
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atgatagagctaccacggattacgcgagccctaagggctcacactcaactcgataaacca
cgatgtttaaagccaactgctgaccccacaaagccggtgttattaaaaaagaagtcctta
cagaggtttaaatcatacacagacatatacaaatatgtcaaagagaatgagcctaactca
aatgagatactaacactctttgatcagttaaaagaggcatgtaaaccgcttacaaaagac
cagccggatgaggttatagatgatgccgcagtactcactctgcggatgttcctggaccaa
gatattgtgatgctaaagcatatgtcacagttgaggcaaacattcggacaagtcatgtcg
actacggctaataaaatttgtgagattgtaacacaaatctccgagcaactaaacgagaca
acaaaagaatacattcgcaaagaagagtcagaatccaataaggaaaatatcaagctgtgg
ggtgaacatatacaatgtcactatataccgtataagcctgccaagaaaccacttgctaag
ttgactagcaagcctgctacggccagcgcatttgttactgacttctctatgaagtataac
agccaagctcctagttcaagcaatcaaacgaaagttcctatagccccaattgagtcgaaa
ttcggtaaaacctggctagaaacgaaagtaaaggaacagtacgagaatacctcaggcatc
tcaagcgtcgacatcctccaatccgttataacactcctaaactcgccccggaccaacgac
gaaatgcagaacgatctgttcgagttactcggcttcgataagtttgagtttatacaagac
atattggagcaccgacaggatatcattaatagtttgaaggcgccgccgcctggtcccacg
ttgtctgaaattgctgctatacttcctgagaacaaaatgccacagtatctatgccaagta
tcagtgttgtcagagcaagagaagatgttagctaagttagtgaggaaagaagagaagaaa
gcaaagaacaggaaggtggaagaagatgatgaggatcaggagattaatatcgcgcagttg
aggtctaagaggttagctgaattatcgaaaccagtggtaccattttctacatccagatca
gccaacatagaccctattctacagaaaatatcgtatttccaaactaaagtgcagtatcct
aatgtttatgattctgctttagaagctaagaattctgcaggttttgtgtcaggtcttaag
ttaatattacccgaaaatgcaatcaagaaggactctaaagaatatgaggagatcattata
cctaaaaacgacccgccccctcttactattggaaaccagcgagttcctgttgctgaatta
gatgagatcggtcaaatggccttcgagaacatcaaagaactcaacaggatacagtcagtg
gtcttccaaactgcgtaccatacgaatgaaaacctcctgatctgcgcgcccaccggggcc
ggcaaaactaatatagcgctgttgacagtcgtgcatcagatcaaacaacacatcgagaat
aatgtgatcatgaaaaataagtttaagattatctacatagcacctatgaaagctctcgcg
tcagaaatgacagcaagcttcgggaggcgacttaggggtcttggtatattggtacgggag
ttgaccggagatatgaaactgactaaagctgaagtgcaacagacgcaaatgattgtgact
acgcctgaaaagtgggatgttgttactaggaagggtgccaccgacacagaactagcatca
atcgtaaaactgctcatcatcgacgaagttcacttattgcacggcgatcgaggtccgata
gtcgaagcgattgtcgcgaggacgctgcgacaagtcgagtccacgcagaacatgatacgg
atagtcgggctgtctgctacgctgcctaactatgttgatgtcgccagattccttcgcgta
aacccgaacataggtttgttctacttcgactctcgcttccggcccgtgcctctggagcaa
cagttcatcggggtcaaggaaagtggcagcggtggaggcgctcatcttaggatgatccaa
tcaatgaacgagatttgctacgacaaagcagtagacatggtacaaaaagggcaccaagta
atggtgttcgtacatgcgcgtaacgccacgcaccaaacagcaatggttcttaaagaatta
gcacaaaagaaaggtcatctaaaacactttgaacctgacgatacaggggcctttcttaag
gcgaagaagtctattggtagcagccctaataaattgttagctgaactctttgctagtggt
tttgcctgtcatcatgctggtatgctgaggagtgatagaaatatggtagaaaaatacttt
gcggaaggtttcataaaggttctagtttgtacctccacgctggcgtggggtgtcaactta
ccggcgcatgctgtaattattaggggcacagaaatctatgaccaaagccacggtacattc
gtggatctcagtatactagacgtcctacaaatcttcggtagagccggacggccgcagttc
gacacctccggtactggcatcattataacaacacatgacaaactaacacattacctgaag
tcaatgaccaaccagttccctattgagagcaactttattaatttacttgctgataatttg
aatgctgaggtcgcccttggaacagtaactaatattgatgaagcagtggaatggctcagt
tatacatatttgttcgtgagaatgagaatcaacccccaggtctacggtcttacatactct
gacgttcaagaagagccgatgttggagaccaaacgtcgcgaattgatcactagtgctgcc
atgcggcttgataacactcagatgatacgatataatgaacggactgggcatcttaatgtt
acagatctcggtcgcacagctagtcactactacataaccagtgaaactatggatgtgttc
aactctatggtgcgtaagtctatgacccaaggatacgtgctagaaatgttgacgaggtgt
tctgaattccaacaactcaaaattcgtaaagaagagttaacagagctttggaacctgaag
aaccagttctgcgagcttcggatagaagaccccccagaggacattcactggaagatcaac
atcctcctgcagacatacctgtctaggggacgcgtgtctgggtcttcgctgcagtccgat
cttaattatattagtcagaatgccgttcgaataatccgagctctcttcgaaatcactcta
cgtaagaacaacgcttacatggccgggttatacctaaagatggccaaaatgttagaactg
caacaatgggacttctacagcgatatgaggcagttcaactgtttcactatcgaaactttg
aaacacattgagtatccgatgttgaaaccagaccagattagagatatggattggaaggaa
gttggtgatctgatacggaacccaaagaacgctcgacatctaaagaaatgcgccgacgag
tttcctctattagagatggaagccagcttacatccaatcactagaaccgtcttgaggata
cgactgactatcatacctaatttcaaatggaacgacaagtaccacacgaaggcgcccgag
gcattctggatttgggtggaggacccagacacagacatcatgtactaccatgaatatttc
cttatcaccaagaaacaggtaattacgagggaaccacaagaattagtaataactataccg
attagcgaaccgttgccgcctcaatactacattcgagcgacttcggaaagatggttagga
tcagaaagtgtgttgccacttacattccaacatttgattctgcccgaaacgcatccacct
cacacagacctcctagaattacaaccgttaccggtgactgctctaaaagacccgtcatac
gagatgctatacaacttcagccacttcaaccccatccagactcagatcttccactgcctg
taccacaccgaccataacgtgttgctgggcgcccccactggctcgggcaagactattgta
gctgaagtcgccatgtttagagtttttaatcagtatccggaatgcaaggtcgtctatata
gctccacttaaagctcttgtcaaggaaaggataaaagattggaaggtacgactcgaacaa
aatttgggaaaacgcgtcgtagagttaacaggtgatgtatcccctgacatcagagctata
cggaactcgcacgtgatagtgacgaccccggagaagtgggacggtatcagtcggtcgtgg
caaaccaggaactacgtgcaagacgtagctctcgttgttatagacgagatacacttgctc
ggtgaggatagaggaccggttttggaagttattgtctcaagaacaaatttcatcgagtct
cacacgtcacggcgcctgcgcatcataggattatcgacggctttagccaacgctaaggat
ctagctaactggctgaatattggagagatgggactgtataacttcaggccgtctgtacga
cctgtgcccttggaagtccacatatcaggccaccctggccgccactactgcccgcgcatg
atgactatgaacaagccgacgttccaggcgatacgcacgcactcgccctgcgcgcccgca
ctagttttcgtgtccagtaggcggcagaccagattaacagcccttgatctcatcgcatac
ctagcggcagaagacaaccctaagcaatggctacacatgcatgaatcagagatggaacag
atcctcgctaacattcgcgagtccaacctcaaactgaccctggccttcggcatcggcata
catcatgccggtctgcatgagcgagacaggagtactgttgaagagttgtttattaatcag
aagatacaggtgctaatctgcacagcaacactagcgtggggcgtgaacttccccgctcac
ctcgtggtcatcaaaggaacggagtactacgacggcaagcagaagcgatacgtcgacatg
cccatcactgatgtactgcagatgatggggcgagcggggcggccgcagtatgacaacgaa
ggagtagcagttgtcttagtccacgatcaaaagaagaacttttacaagaagttcttgtat
gagccgttcccggtagagtctagtttactggacgtgttgcctgatcatcttaacgctgag
gttgtggctggtaccgttcaaaccaaacaagacatcctagactacatgacatggacgtac
ttcttccggcgtctcctcaagaacccgtcttactataacctggagagtgttgagcctcag
gacgtcaactattacctgtctaacttggtgcagagctctttagatgtgttggccgatgct
aactgcttggagattgaagaggatcttcgcacagtccactgcacttggatgggtcgaata
gcatcatattactacctctcctacaaaactatggcgcatttcacaaggaatcttcagtac
aatatgaacatcgatgagttattacgagttctatctgactgtgaagagtacgcgacgctg
cctgttaggcataatgaggatctgcttaatggtgaattatccaaacaatgccgtctgcct
gtcgacgctctatctcttgactcgtcgaacgtcaaagcattcttattactgcaagcccac
atgacaaggttactgctaccgaacaccgactacctcactgataccaagtcagtactggat
cagactattaggattctacaggcaatgatagacacatcagcagaaaacggctggctagcc
gtctgtctctcctgtcagatgttaatgcaaggcattgtacaggcaagatggccgacggaa
tcccccctaacaaccctcccatacgtggactcccaacacctatacatgttctcacacatg
tctagagatacggataggccttgtatgatgttgaatggacttaaagtggcctgtgctagg
aattatgagttgttagccaagtatttaaggaaagagtttgaggagaatcaaattgagcag
atatataccgctatttgcgatatgcctactctagacataaaaatacgtatacgcggtcta
tggatggaccgcgacaatgtacaggaaaaacttattcatgaaaatccttcaaaggacaat
tggatgccgttacatgctgatcaggaatacaccctccgtttggaactaaaccgtcgcggc
ggtaaccccaacaacgtgttctgcccccgcttcccgcgcggcaagaacgaaggatggatc
gtgaccgtcgggactgtggacgacggagaactacatgcactcaaacgtgtaccccccaag
gggaatccacaggtcaacctacacacgccttcaacactaggccgtataatctacacaata
tacatcatgagcgacagctacatgggtctagaccagcagtacgacatgcagtttgagatc
ttacccccactaccggaagagaaggtcgaacgagtttatcatgatatcgagaaagtattc
ctagaataa
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integrated database retrieval system
