Trichoplusia ni (cabbage looper): 113499256
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Entry
113499256 CDS
T05757
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein Dscam2
KO
K06767
Down syndrome cell adhesion molecule
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tnl04515
]
113499256
Cell adhesion molecules [BR:
tnl04515
]
Immunoglobulin superfamily
DSCAM family
113499256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
C2-set_3
Ig_C17orf99
V-set_CD47
Ig_J
Motif
Other DBs
NCBI-GeneID:
113499256
NCBI-ProteinID:
XP_026735462
UniProt:
A0A7E5W4N1
LinkDB
All DBs
Position
12:complement(5487397..5602446)
Genome browser
AA seq
1503 aa
AA seq
DB search
MFKIWIFLAASTVFINLCTGITIFIHKKEDHTHILRQFQSDATSQSRARGISADTTDIPG
NYGSSRRQNSAWEHHPSKSIKHKKKESRQSYWGNGNYGVSFVPRSKRDLGSNNILITQHF
SEKVVTPGEELSLQCTATADRPPRFIWERDGVVISSNTDQRYTLGQMMSPTGVGVVSQLN
ISRSRVEDGGLYACIAFESESSTGHSARIDVFGPPYIRTLPPIKVQSGESLKLRCPFYGY
PISKLEWEHKGKKIISSTLPQHSRYKRTYLTTSNNSKNTRRKRKKRQIFESGEDGVLNIA
RIVKEENGDTYTCIVYSPSGEMARRSFEIQVVEAPELDELRVGTGLKEGQIVQITCNIIG
GDPPIYFSWLKDGKKLPASLKITERSSELFSVLIIKRVSLEHCGKYTCIATNHVGKVNQT
ADLYINVAPKWIEEPTNTSLLLGQRGIVYCNANGYPTPQIHWMKRDATLGIWRPVLDLAG
GGVISYPNGTLIIEVVSLSDEGMYACNVENGVGDALNKNLWISVNKPVHFETVGANLTTK
MGLPVTLTCKPLGDNPIRVKWSLDGKPVDFTTSRLTISETMTHNGLNSVININYVESRDG
GTYECRASNPYGVAAFNVHLDILEPPTPPLDLQLDTVSSNSAKLSWRDTISTHVQYYTMQ
YTSNDFMMWDSAKSINITRQDNDVRQSIELRDLQPATDYRVRVASGNQVDLSPYTQPVHF
STQQEAPSSTPLGVQVQQTDNPGELVVSWLPPPRESHNGPLQGYHVKAMPRMSGDSVPND
TQTKMVKVMTRKGKQETILSGLLKNMRYAVSVSAFNSAGNGPFSLPVYQTTREGAPEIPP
SGVECRGVSSSSLRVAWQPITAQGTSLLGYSVYFSTEDGPWQNISSPHTEMYLQALLKYT
NYTVKVAGFSNYGLGPFSYPIVCTTLQDVPGPPAAIKVLVSSPTSLLVSWKRPDQPNGDI
THYTVYVKPVSSTGSPQNYRVEATLETSLRHLTFPVSGLSTGRQYEVFVRAHTAVGEGVP
SNRVHIDLSSKVVAGVASLGGAVSAGVGRSLLLACTCAGAPPPRTVWYHNHNIITHHPRF
TRNHDDSLLINNIDQSLSGNYTCLAKNLYGSDSVSYEVSVLPTPEPPSLRVTSHKNAIHL
QWDTPRKIGGRSQKISYSLTWKEANGSWQDAWSSKGTSPQGIQEYTLQGLKCGTKYSLRM
TAANSVGSSQPTYVDATTLGGVPISPTSTEWFWSNATHVYIQLSGWDDNGCEITRFDVEY
KEYGGKIWRKAENRLPQLDQMWSHYVPSSLLNQPNSFVLADLTPAQWYYIRVTAENAAGV
STSLYSYATTTVQGESIGLPSDFLDLNMLVIICSSILLMICSLTCVYILVKRHNHQHLTE
YRNSLTAECKSERSNVTVNTPQSVPADINNRVYSTPVHLTAENKHELYEISPYAQFAIGF
RTFGHVDNQEVPSRIHLPGNSKSRYDSETSFQMRSESEESDCVSRTTTLKSAPRKACRVP
HHR
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatttggatttttcttgccgcttctactgtcttcattaatttatgcacggga
ataacaattttcatccacaagaaagaagaccatactcacatcctcaggcagttccaaagt
gatgcgacgtcgcagtcccgggctcgcgggattagcgccgacactacggacatccccggg
aattatggttcttcgagacgtcaaaacagtgcttgggaacaccatccatctaagtcaatt
aaacacaagaaaaaggagagcaggcagtcttattggggtaatggtaattatggggtgtca
ttcgttccaagatcaaaaagagatttgggatccaacaatatccttatcacgcagcatttt
agcgagaaagtcgtcacacccggtgaagagctgagtctacaatgcacggcgactgcagac
agaccaccgaggttcatctgggagagagatggcgttgtcatatcatctaacactgatcag
agatatacgctcggtcagatgatgtcgccaactggcgtcggtgtggtctcccaactgaat
atatcaaggtctagagttgaagatggaggtctatacgcatgtattgcattcgagagtgaa
tctagtacggggcattcagcaaggatagatgtttttggaccaccatacataagaactcta
ccgccaataaaagtccaaagtggagaatcactaaagctaagatgtcctttctatggatac
cccatcagtaaacttgaatgggaacacaaaggcaagaagataatcagttcaacactccct
caacactctcgatacaaacgtacatacttaacaacatccaacaacagtaaaaacacaagg
agaaaacgcaaaaaaagacagattttcgagtcgggcgaagacggcgtacttaatatagca
agaatcgttaaggaagagaatggagacacttacacttgtatcgtttatagcccttcagga
gaaatggctagaaggtcatttgaaatacaagtagtagaagcaccagagttggacgagctt
cgtgtaggaactggtctcaaagaaggccagatagtgcaaattacttgcaacatcatcggt
ggagacccacctatctatttctcttggttgaaggatgggaaaaagctgccagctagttta
aagattacagaacgaagttcggagttgtttagcgttttgatcataaagcgtgtttctttg
gaacattgtgggaaatatacgtgcatagcaactaaccacgttggcaaagtgaaccagaca
gcagatctttatattaatgtcgcaccgaaatggatcgaagagccgacaaacacgtctcta
ctgttaggacaaaggggcatagtttattgtaatgctaatggctacccgacaccgcagata
cattggatgaagagggatgcaacattaggtatttggcgtccagtcctagatctggctggt
ggtggagttataagctacccaaacggtaccctgattattgaagtggtatcactttccgac
gagggtatgtacgcatgcaacgttgaaaatggagttggtgatgcgctcaataaaaatcta
tggatcagtgttaacaagcctgtgcacttcgaaacagtcggcgccaatttgactacaaaa
atgggtttgcctgtgacactaacatgtaaaccgcttggagacaaccctattagagtcaaa
tggtccttggatgggaagcccgtcgattttactacatcaaggctcacaatatcagaaaca
atgacacacaatggacttaacagtgttataaacatcaactacgtggagagtcgagatggc
ggcacgtatgagtgtcgagcgagcaatccgtacggagtagctgcctttaatgttcatctg
gatatactagaacctccaacacctccgctagacctgcaactggacacagtctccagtaac
tcagctaaactatcgtggagggacacgatcagcactcatgtgcagtactacaccatgcag
tacacatctaacgacttcatgatgtgggatagtgctaaaagtattaatattactagacaa
gacaatgacgtccgtcaaagtatagaattaagagatcttcaaccagcgacggactatcga
gtgagggttgcttctggtaatcaggtcgacctcagcccttacacacaacccgtacatttt
agcacgcaacaagaagcaccatcatctacgccactaggagtacaagtccagcaaactgac
aatcccggtgagctggtggtgtcctggctcccaccgccaagagagagtcataatggtcct
ctacaggggtaccacgtgaaggccatgccgaggatgagtggggattcagttccaaacgac
acccaaactaaaatggtgaaagtgatgacaagaaaaggaaaacaggaaacgattcttagt
ggcttgcttaaaaatatgaggtacgctgtatcagtaagtgcatttaattcagctggaaat
ggcccgttttcattaccggtctaccaaactacaagggaaggagctccagagataccacct
tcaggcgtagaatgcagaggagtatcatcgtcatcgttaagagttgcgtggcagccgatt
actgcacaaggaacgtctctacttggatattccgtgtatttcagtactgaagatgggccc
tggcagaatataagctcacctcatacagagatgtaccttcaagctcttctcaagtatact
aactatactgtgaaggtggctgggttctccaactatgggctaggaccgttttcgtatcca
attgtttgtacgacgctgcaggatgtacctggacctccagcagctatcaaagtattagtg
tcatcaccaacatcacttctcgtcagctggaaaagaccagaccaaccaaatggagacatt
actcactacactgtttacgtgaaaccggtctcaagcactggctccccacagaactaccgc
gtagaagcgacattggaaacaagtctccgacacctgacgttcccggtatcagggctctcc
accgggagacagtacgaggtctttgtgagagctcacacagcagtcggtgaaggtgttccg
agtaatcgtgtgcacatcgatctgtcttctaaagtggtagcgggcgtggcgtcgctgggc
ggcgcggtgtcggcgggcgtggggcgctcgctgctgctggcctgcacgtgcgccggcgcg
ccgccgccccgcaccgtctggtaccacaaccacaacatcatcacacaccatccgcgcttc
accaggaaccatgatgacagcctgctcattaataacatcgaccaatcactcagcggtaac
tacacgtgcttggctaagaatctctacggatctgattccgtctcgtacgaggtgtcagta
ctaccaacaccggagcctccgagtttgcgggtgacgtcacataaaaacgctatacatcta
cagtgggatacgccgagaaaaattggagggaggtcacagaaaattagttacagcctaact
tggaaagaagcgaacggttcctggcaagacgcatggtccagcaagggcacttctccccag
ggcatacaagagtacacccttcagggtctaaagtgtggcactaagtactctctgagaatg
accgccgctaatagtgtggggtcctcacagcccacttatgttgatgctacgactttaggt
ggagtgcctatatcaccaaccagtactgaatggttttggagtaatgcgacgcacgtctac
attcaattgagtggatgggatgataacggctgtgagattacaagatttgatgtcgaatac
aaagaatacggtggcaaaatatggagaaaagcagaaaatagacttcctcaacttgaccaa
atgtggagtcactacgtgccttcatcactcctcaaccagccgaactccttcgtcctcgcc
gacctgactccagcgcagtggtactatataagagtgactgctgagaatgccgccggagtt
tccacgtctttgtatagttatgctactactactgtgcaaggagaatcaataggcctgcct
tcagatttcttagacttgaacatgctggtcatcatttgcagttccattctattgatgatc
tgttcgttaacttgcgtttatatactagtaaagagacataaccatcaacacctaacagag
tacaggaactctctgacagctgaatgcaagtccgagagaagcaacgtgacggtgaacacg
cctcagagcgtgccggccgacatcaacaacagggtctacagtacacccgtacatctcact
gctgagaataaacatgaattatacgagataagtccatacgcgcaattcgcgatagggttc
cgtacgtttgggcatgtggacaaccaggaagtaccgagcaggatacatctaccgggtaac
agcaaatcccggtacgatagtgaaacaagttttcaaatgcgatcagagtctgaagaaagc
gattgtgtgtcgcgaaccacaacactgaaaagtgcaccgagaaaagcctgcagggtacct
catcataggtag
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integrated database retrieval system
