Trichoplusia ni (cabbage looper): 113499340
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Entry
113499340 CDS
T05757
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113499340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113499340
Spliceosome [BR:
tnl03041
]
Common components
Common spliceosomal components
SR proteins
113499340
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
113499340
NCBI-ProteinID:
XP_026735581
UniProt:
A0A7E5W511
LinkDB
All DBs
Position
12:10205820..10214483
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AA seq
386 aa
AA seq
DB search
MVGSRVYVGGLPFGVRDRDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGK
ELLGERVVVEPARGIDRSADRYRRDRYYERDRGRSRYDDYSYRYGPPTRTEYRLVVENLS
SRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTELNGRRIRL
IEARRGSRRRTRSSSSRSRSRSRDRRRSRSRSRSRRSSRSRSRSKSRPKSKSPAPKSRSR
SRSKRSMSASIRDRSRSKSRSRSASRRSERRSASRRSERRSGSPRPSAERNGEKSASRSK
SRSPKAASKERSRSRSKEASPKREEERRPSKSRSRSRSPHSRSGSRSRDRSASRSRSASR
SRSASPRQNGDAQDRASTDRSPRSGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggtcggctcacgtgtttacgtcggcggtcttccattcggcgttagagatagagacttg
gagaagttcttcaaaggcttcggaagaatcagggacatcctcatcaaaaatggctacgga
tttgtggaattcgaagattacagagatgcagatgatgcagtttatgaactgaatggaaaa
gaattacttggagagagggtggtggtggagccggcccgggggatcgaccgcagcgccgac
cggtaccgccgcgaccgctactacgagcgcgaccgcggccggtcgcgatacgatgactac
agttatagatatggaccgccgacgcgcaccgagtatcgtctagtcgtcgaaaatctgtct
agccgcattagctggcaggatttaaaggattacatgcgtcaagctggcgaagttacttac
gctgacgctcacaagcagcatagaaatgaaggtgttgtggaatttgcgactcactctgac
atgcgcgcggctatcgaaaagttggatggtactgagctcaacgggcgtcgcattcgtttg
atcgaggctagacgtggctcgcgccgccgcactcgctcctcgtcgagtcgcagccgatcg
cgatccagagaccgaagacgcagccgctccagatctcgctcgcgccgttcctcgcgcagt
cgctctcgctccaagtctcggccaaagagcaagagcccagcccccaaatcccgctcccga
tcacgttccaagcgttcgatgtcggcgtcgattagggatcgcagtcgttcgaagtcgcgg
tctcggtcggcgtcccgtagatctgaacgccgctcggcgtcccgtagatccgaacgtcgc
tctggctcgccgcgaccctccgccgaacggaacggggagaagtctgcctccagatctaag
tcccgctcaccgaaagcagcttccaaggaaagatctcgatcccgcagcaaggaggcgtct
ccgaagcgtgaagaagagaggcgtcccagcaagtcccggtcccgctcgcggtcgccgcac
tcgcgctcgggctcgcgctcccgcgaccgctcggcgtcccgctcgcgctccgcctcccgc
tcgcgctccgcctcgccgcgacagaacggcgacgcacaagaccgcgccagcacagaccgc
tcgccacgcagcggtgaatag
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