Trichoplusia ni (cabbage looper): 113499600
Help
Entry
113499600 CDS
T05757
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113499600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113499600
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
113499600
INO80 complex (yeast)
113499600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
TMA7
Motif
Other DBs
NCBI-GeneID:
113499600
NCBI-ProteinID:
XP_026735915
UniProt:
A0A7E5W5J5
LinkDB
All DBs
Position
12:complement(10496129..10509576)
Genome browser
AA seq
1395 aa
AA seq
DB search
MSEKLVGKTVLKRHEVARPVHIQRLEASLDVRPFVSQVERILNSDGASDSDDDSDAKSIG
NEMSKGDRMIHGVVTTKQERQSDRLRLYNLSSVGEEREWLRDVLLSSGSETSSDEDSPSA
KESRIQRLLKERKHQNRYAKKYYKDQGNSRYMYYGAGLLSTVDRYPERRISRPVPPPPST
RGRRGRPAERGSSTRGLHKARRGRVRDARGNEGGDMPDGVDWEEQLRNLKDEPDNDDYNM
STEKPGVRGRKKLSTLKTPEALTARRRRHWLLLVKKELGKVQRARTATHREVMLQRKRLA
TLCCKHWRHIAMQSQKNMKETVWRCKRLSREMQAYWRRYDRAERETRRRMEREAEEQRKM
DVELMEAKRQRRKLNFLITQTELYAHFMQKKMNAGDDGDSGAARILRQLDEDRDPRLAAI
DHYDSEVMKARASRNAREAFRAERARTQLFDAAAGAAEPEPAPGPERRAGDHDQPDIFRG
TLKGYQLKGMNWLANLYDQGISGILADEMGLGKTVQCIAFLCHVAERLGVWGPFLVVSPA
STLHNWQQEMQRFVPDFKVVPYWGSPSERKILRQFWERKDLHTRQAAFHVVVTSYQIVVS
DLKYLNRVSWQYMILDEAQAIKSSASMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH
FIMPTLFDSHEEFNEWFSKDIESHAENKSTIDEKHLSRLHMILKPFMLRRIKKDVENELS
DKIEIMVHCPLTIRQKLLYIALKKKIKIEELLHYSVGAESGHNVDKNFTSNLMNLVMQFR
KVCNHPELFERRDVRSPFSMQVDDYHIPKLVAEECILIRAIPSKRHLLYNKLSILTPDSV
QRSVNGEEMEVEGGKKFVDNSFFAFTRFMDLSPMELYRVMLCGWLFAMQHIEYCLEKYEK
LRHRHSWWTSSQVCDVKQEAGVTETDLCHDYYDRVTSKDKLLVCPDGDVFGKRKDDSLMW
KELLFTDPLWIQGGPFYTHTEHTIHYVPETIEHKAMRIRNMRERDGQTEMLSEIKTEEGG
VIAVQPMEVPDVPHVERPPVTYPDMPTPLPSFLYTAQQKVCTCTRAAWAVSRRFAHQRAA
GAAGRAALWRLAAAARPPHGWAELHVPDKNQLVSDAGKLTALDSLLRRLKERGHRVLIYS
QMTKMIDLLEEYMWHRKHKYMRLDGSSKISARRDMVADFQARTDIFVFLLSTRAGGLGIN
LTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERIMQRAREKSEI
QRMVISGGNFKPDTLKPKEVVSLLLDDEEIELKYRQKSEEKKLMEERERKRKMGILPPVQ
APATIEAKRPRDSASEPGSPLQVDDDDKLVVDVPPSPSPLPSYSSTPAVGSSSAAGPSGS
GRAGAWGVARAGRGA
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagttggtgggaaagacggtgctgaagagacatgaggttgccaggcccgtg
cacatacagaggctggaggcctccctggacgtgcggcctttcgtgagtcaagttgaaagg
atactgaactctgatggggcttccgacagtgatgatgactcagacgccaagtctattgga
aacgagatgtccaaaggagaccggatgatccatggagtagttactaccaagcaagaacgc
caaagtgaccgcctcagactgtacaacttaagttcagtaggagaggagagagaatggctg
cgagatgtcctattgtcttcagggtcagagacaagtagcgatgaagattctccatctgca
aaagagtcgaggatacagagattgctgaaggagaggaaacatcaaaatagatatgctaag
aagtattacaaggaccaagggaattcccgctacatgtactatggggctggtctcctatcc
accgttgatcgatacccagagcgtcgtatcagcaggccggtgccaccaccaccctccacg
agaggcaggagaggacggcctgcggagagagggtcgtctacaagaggcttgcacaaagca
cggcgagggagggtgagagatgcaagaggcaatgagggtggtgatatgcctgatggtgtt
gattgggaagaacaattacgtaatttgaaggatgaacctgacaatgatgattataacatg
tccacggagaagcctggtgtaagaggacgcaaaaagctatcaacattaaaaacccccgaa
gcgctgaccgctcgcagacgacgtcactggttgctactagttaagaaagagcttggtaaa
gtgcaaagggcgcgtactgccacacatagagaagttatgctgcaaaggaaacgattagca
accttgtgctgtaagcattggaggcatattgctatgcagagtcagaaaaatatgaaggaa
acagtatggcgatgtaagcgattgagtcgagagatgcaagcttattggaggcgatacgat
cgagccgagagggagacaagacgacgtatggaaagggaggctgaggaacagagaaagatg
gacgtagaactcatggaagcgaaacggcaacgtcgcaagctaaacttcctgataacacaa
accgagttgtacgcgcatttcatgcagaagaagatgaatgccggggacgacggcgacagt
ggcgccgccaggatcctgcggcaactcgacgaggaccgggacccgagactcgcagctatt
gatcattatgatagcgaggtgatgaaggcccgcgcgtcccgcaacgcgcgcgaggcgttc
cgcgcggagcgggcgcgcacgcagctgttcgacgcggccgccggcgccgccgagcccgag
cccgcgcccggccccgagcgccgcgcgggcgaccacgaccagcccgacatcttcaggggc
acgctcaagggctaccagctcaaagggatgaactggctggctaatctctatgatcagggt
atcagtggcatattagcagatgagatgggtctcggcaagacggtacaatgcatagcgttc
ttatgtcacgtggctgagagacttggtgtatgggggccgttcctcgtcgtgtcacccgct
tcgacactacacaactggcagcaggaaatgcagagatttgtaccagatttcaaagtggta
ccatactggggcagtccaagcgagcgcaaaatccttcgtcaattctgggaacgtaaagac
ttgcatacacgacaagcggctttccacgtcgtggtgacgtcataccagattgtggtgtca
gatctgaagtacttaaaccgtgtgtcgtggcagtacatgatactggatgaagctcaggct
attaaaagctctgcgagtatgagatggaagttgctgcttggattcagctgtaggaataga
ttgttgctgtctggtactcctatccagaacagtatggcggaactgtgggcgctattgcat
tttataatgccgacgttattcgactcccatgaggaattcaacgaatggttctccaaagat
atcgagagtcacgccgagaataagagtactattgatgagaagcatttatcgcgcctacac
atgattttgaagccattcatgttgcggcgaatcaaaaaggacgtagagaacgagctctct
gataaaattgagattatggtgcattgtccgcttactattaggcagaaattattgtatata
gctttaaagaagaaaataaaaatagaagaattactccactactctgtgggcgccgagtct
ggtcacaacgtagataagaacttcacttccaatcttatgaacttagttatgcaatttaga
aaggtatgcaatcaccccgaattattcgagagacgcgacgtaagatctccattttcaatg
caagtcgacgactatcacataccaaagctggtagcagaagaatgcattctcatccgtgcc
ataccttcaaaacgccatctactatacaacaaactgtccatattaacccctgatagtgta
caaagaagtgtcaatggggaggaaatggaggttgaaggggggaaaaagtttgttgataac
agtttctttgccttcacgaggttcatggatctatcgcccatggagctgtatagggttatg
ctgtgtggatggctttttgcaatgcaacacattgagtattgcctagaaaaatacgaaaag
ctccgtcaccgtcacagctggtggacctcctcacaggtttgtgacgtcaaacaggaggca
ggcgtgacagagacagacttatgtcacgactactatgatagagtgaccagcaaggacaag
ctgttggtgtgtcccgatggagatgtgtttggaaagagaaaggatgatagcttgatgtgg
aaggagctgttgtttactgatccattgtggattcaaggtggtccattctacacacatacc
gaacatacaatacattacgttcctgaaactattgaacacaaagctatgagaataaggaat
atgagggaaagagatggacaaacggagatgctaagcgagatcaagacagaggagggcggt
gtgatagccgtgcagcccatggaggtcccggacgtaccgcatgtggagcggccgccggtc
acctacccggacatgcccacaccgctaccctcgttcctgtatactgctcagcaaaaggtg
tgcacgtgcacgcgcgcggcgtgggcggtgtcgcggcgcttcgcgcaccagcgggcggcg
ggcgcggcgggccgggccgcgctctggcgcctggccgccgccgcgcgcccgccgcacggc
tgggccgagctgcacgtgcccgataaaaatcaacttgttagcgatgctggtaaactaaca
gctttagactctctgttaagaagactgaaagaacgtggacatagagtgctaatctacagt
caaatgacgaagatgattgatttgcttgaggaatacatgtggcatagaaaacataaatac
atgcggttagacggctccagtaaaatttccgctcgacgagacatggtggctgattttcag
gcacgcacagacatcttcgtgttcctcctgtcgactcgcgccggcggtctgggcatcaac
ctcacagcagcagacacagtcatattctacgactccgactggaaccccaccgtggaccag
caagctatggaccgcgcgcacaggctgggccagactaaacaagtcacggtgtatcgtttg
atatgcaaggggactattgaagaaaggattatgcagagagcgagggagaagagtgagatt
caaagaatggtgatcagcggtggtaacttcaaaccggacacgctgaaacccaaggaagtg
gtgtctctgcttctcgatgacgaagaaattgaactgaaatatcgtcaaaaatctgaagag
aagaaactgatggaagaaagggaacgtaaaagaaaaatgggaatattacctcctgttcag
gccccagcgactatcgaagcgaaacgtcctcgcgactcggcctcagaaccgggcagtcca
ctacaagttgacgatgatgacaaactggtggtcgatgtgcctccttcaccgtcaccctta
ccgtcgtacagcagcacccctgcagtgggcagcagcagcgcggccgggccctcgggcagc
ggccgcgccggcgcctggggcgtggcgcgcgcgggccggggcgcg
DBGET
integrated database retrieval system
