Trichoplusia ni (cabbage looper): 113499606
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Entry
113499606 CDS
T05757
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113499606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113499606
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113499606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
113499606
NCBI-ProteinID:
XP_026735923
UniProt:
A0A7E5W5G7
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Position
12:<13220595..13267017
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AA seq
1319 aa
AA seq
DB search
LFQTTDSADFLATRPHTAAVIPGKPAGNPLQFVRVGPADLGSRAREQLRRAELAKRTDPA
RIERQEDWQSNLDNWKSSRRKRVEHIIERCVEVRRMEHEPSQPRAKSKTFNEMLEERAGR
RRRNPLALYTEDDGHDLSDLGIGTSSTKSSLSEDCDTHSLASDGIDLDKNHSDVDNLSNC
DTNRKLGSSANEYDTCTTTTISSPEPEEYTYEGAIEGYKSRIISQTNSNIVKTAVNNNFK
EKSPEKNGDLNRIRTNVSNKIEEKLTSFQQERANDAKNNNQKKDLPKVDIHKRREQFERE
NSQEPQPNKPKLPEIANKKSIKERLSSLEKFTEETHIQKSTSDLTKLPTEVKPLKERLSS
LEKVKTTEPEKVKRLSNGDLSNTRSLKERLNSLKSQTSEEEIKATKTEVKEVSMSLKERL
SCLDAAKNKEIPKISVEEELAHNKEIEIKVEEPKESMMDNSLKSSLSGIENQMQSFCRSL
DSLDINGQSSPNSFDRVQSLEDFDCTEMQNNTVPSDIETEDSGIHTARDSCAPADDIADL
TQVASPVGEPMVEVSEYESSNEDGTTMEMKIEELDKIPEPVQLVQDVIIEEPEDQTSIKT
DDDSASNYLQAVSQIEELSVTEVTEIQLDKDDEDTLKSLENQDTSVSLNEPASTSSESDT
VVFEGKMTIHLNLNEICNNMNAGAGNTNNANSPNSMPMVIDALELAFKELDSEDSAAMDE
TTEDKQDDFINKKITVAPLYENIDIFYQNSEETAFPLDLPTNVLEPPKEKPPPPPTEESN
EDELLGNGNFKHTSSARRIKKEIRNKRTSFLGIEGQDDSYLDVDLTLAPRPDITSFLQEE
TKIEKLLYKKTLSHDMDSNLRESRDSGVDVDRGPSAEAWYKGHSSPETSNPHSRQNSEPY
THVTVTSDEEESSKKQVEFSSNLNSKLTELTEAPADKIESLDKKLQQQQARTNADWPGGP
YDDAHTKEVLRFERELLQLEQEELRRQRENLLRDQNRIIQKSVQDISSIPSTPEKPPLRS
RPEVNPHYRHSMPNLLLNENYPAIPPAVPERQEERGVDEKRKPFVSEEHMQRHFGVEESR
RVLYEAAEARRQPARVPQPVLPPKPKSRESIEREITMRSSRVPSAVEYANVQLRAPPSHN
TQHYHPMTRHTLQALSAAPTPKLISNTDWMQARNRKPANYNYNQHWLIQEAEQRRLEEQL
RGARPLRHPHQRDSLTHSALHSGQPADGSRAARPEPRPDKLLSVSGRRKCSHCGEELGRG
AAMIIESLSLCYHVWCFTCALCGAALGDGRAGADVRVRAARLHCQHCYSSEDGRKYSAV
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
cttttccagacaacagacagtgcagacttcctggcgacgcggccgcacacggcggctgtg
atcccgggcaagccggcgggcaacccgctgcagttcgtgcgcgtcggcccggcggacctc
ggcagcagggccagggagcagctgcggagggcagagctcgccaagcggaccgatcctgct
cgtatcgagaggcaggaggattggcagtcgaacctggacaactggaagtcgtcgcggcgg
aagcgcgtggagcacatcatcgagcgctgcgtggaggtgcgccgcatggagcacgagccg
agccagccgcgcgccaagtccaagaccttcaacgagatgcttgaagaacgggctggccgg
agaaggcggaacccgcttgccttatatactgaagacgacggccatgacttgagtgacctc
ggcatcggcacctccagcaccaagagcagcctcagcgaggactgcgatacgcacagtcta
gctagcgatggtatcgacctggataagaatcattcagatgtcgacaacctgtctaactgc
gacacaaaccgcaagcttggctccagtgccaacgaatacgacacctgtaccaccacaact
atcagctctcccgaaccagaggagtacacgtacgagggagccatcgagggctacaagtcc
agaatcatctcacaaactaacagcaatatcgtcaaaacagctgttaataacaacttcaaa
gaaaaatcacctgaaaagaacggcgatctgaacagaatcagaacgaatgtaagcaacaaa
atcgaggagaaactcacctccttccagcaagagagagccaacgacgcaaagaacaataac
cagaagaaagacttaccgaaagtcgacattcacaagaggagagaacagtttgaaagagaa
aattcccaagagccgcagccgaataaaccgaaactcccagaaattgcgaacaaaaaatct
atcaaggaaagactgtctagtttagagaagttcacagaagagacgcacatccaaaagtct
acgagcgacctgaccaagttacccactgaagtgaagccgctgaaggaacgcctgtcttca
ctcgaaaaagtcaaaacgactgaaccagagaaagtgaaaaggctttcaaatggagatcta
agcaatacaagatccctgaaagagcgtcttaacagtttgaaatcacaaacctctgaggaa
gaaataaaggctacaaagactgaagtcaaagaagtttccatgagcctgaaggagcgtttg
tcttgtctcgacgctgccaaaaacaaggaaataccaaaaatatccgtggaagaggaactt
gcccacaacaaagaaattgaaatcaaagttgaggagcctaaagaatcgatgatggacaac
tctttgaaatcaagtttgtctggcatagaaaaccaaatgcaaagcttctgccgctccttg
gatagtttggatattaacggacagtcgtctcctaactcattcgacagagtgcaaagctta
gaagactttgactgtactgaaatgcagaataataccgttccaagtgatatcgagactgaa
gacagtggcatacacacggcgagagactcatgcgcgccagccgatgacattgctgacctg
acacaagtggcctctcctgtcggagaaccaatggttgaggtctcggaatacgagtcgtct
aacgaagacggaactaccatggaaatgaagatcgaagagctggacaagatcccagaaccg
gtgcagctcgtacaagatgtgattatcgaagagcctgaagaccaaacaagcatcaagact
gatgacgacagcgctagcaactacctgcaagctgtctctcagatagaggaactaagtgtc
acggaagtaactgagattcaactcgacaaggacgatgaagacactctaaaaagtttggaa
aaccaggacaccagcgtaagtttgaatgagcctgcctccacctcgtcggaaagcgacaca
gtggtgtttgaggggaaaatgaccatacacttgaatctgaatgaaatttgcaacaatatg
aacgccggtgccgggaacactaacaatgctaactctcctaacagcatgccaatggtgatc
gatgctttagagttggcattcaaagaacttgactcagaagacagcgcagccatggacgaa
actacagaagataaacaagacgacttcataaacaagaagataactgtggctcctctgtac
gagaacatcgacatcttctatcagaattctgaggagacagccttccctctggatttgccc
acgaatgttctggaaccgccgaaggagaagcctcctccgcctccgaccgaggagagcaac
gaagatgaactgctgggcaatggcaacttcaagcacacgagctcagcgcgccgcatcaag
aaggagatccgaaacaagcgcaccagcttcctcggaatcgagggtcaggacgacagctac
ctggatgtcgacctcacattggccccaagacctgacatcacttccttcctgcaagaggaa
accaagatcgagaagcttctatacaagaagacgctgtctcatgatatggactccaactta
agagaaagcagagattctggtgtggatgtggacaggggcccttcggcagaggcctggtat
aaggggcactcgtctcccgagacctctaacccacatagcagacagaatagtgagccatac
acgcacgtgacggtcacgtcagatgaggaggaatcatccaagaagcaagtggagttcagc
tcgaacctcaactcgaagctgacggagctgaccgaggctcccgcagacaaaatcgagagc
ctcgacaagaagctgcagcagcaacaggctcgcactaacgcggactggcccggcggtccc
tatgacgatgctcacaccaaggaggttctccgcttcgaacgagaacttttacaactggag
caagaagaattacgtcgtcagagagaaaacctactccgagaccagaacaggatcatccag
aaatcagttcaggatatctcctccataccttcaactcctgagaagcctccgctgcgcagc
cgaccggaagtgaaccctcattacaggcactcaatgcccaatttacttcttaatgagaat
tatcctgcaattccccccgccgtgccagaaaggcaagaggagagaggggtggatgagaaa
cggaagccgtttgtgtctgaggagcacatgcagcgacacttcggggttgaggagagcagg
agggtgctgtacgaggcggcggaggccaggaggcagcccgccagggtgccgcagcctgta
ctgccgcccaagcccaagagcagggagtccatagagagggaaattacgatgagaagcagt
cgcgtcccgtcggcggtggagtacgccaacgtgcagctgcgagcgccgccctcacacaac
acacaacactaccatcccatgaccagacacacgctgcaggctctaagcgcggctcccact
ccaaagctgatctccaacacggactggatgcaggcgaggaataggaagccagcaaattac
aactacaaccagcactggcttatacaggaagccgagcagcgtcgtctggaggagcagctc
cggggagcgcggccgctgcgacaccctcaccagagggacagcctcacacactccgcactg
cacagcgggcagccggcggacgggtcccgcgcggcgcggcccgagccccgccccgacaag
ctgctcagcgtcagcggccgcaggaagtgctcgcactgcggggaggaactcggtcgcggc
gcggccatgatcatcgagtcgctgtcgctgtgctaccacgtgtggtgcttcacgtgcgcg
ctgtgcggcgcggcgctgggcgacggccgcgcgggcgccgacgtgcgcgtgcgggccgcc
cgcctgcactgccagcactgctactcctccgaggacggcaggaagtactccgccgtctga
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