Trichoplusia ni (cabbage looper): 113499801
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Entry
113499801 CDS
T05757
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113499801
Membrane trafficking [BR:
tnl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113499801
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113499801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Lgl_C
Synaptobrevin
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_LRRK2
WD40_like
Motif
Other DBs
NCBI-GeneID:
113499801
NCBI-ProteinID:
XP_026736121
UniProt:
A0A7E5W7B8
LinkDB
All DBs
Position
13:1682959..1893731
Genome browser
AA seq
1354 aa
AA seq
DB search
MKKFTFKGVLDGFRSSVQAAPRGTEQEIQETLRPDHFQIKKTFRHGFPFSPTALAWDPIQ
KLLAIGDKGGNLRILGGPGVDAHVRHECGEAVLHARFLVNEGALVTATADDQLHLWTFRQ
KSPQRLHSLKFQRERITCLHLPLASKWIHVGTERGNVHVVNIETFALSGYVINWNKAIEV
TRPNHPGAVVEISDNPLDASKLLIAFETGLVVVWDLRARMAEWRGALGTGGPGEGVRAAA
WQHDGKLMTAHVDGALATWSTRAPRPSSLSYPHAKANKDGKLEPCKPILRLEWKTSRTGE
SLVIFSGGLPTDKAGRTHSITVLNGKSTTVLEMEHSVVDFVTLCETPHTADYQEPYAIVV
LLQNDLVVIDLQSPGYPCFENPYPMDIHESPVTCCSYFADCPSDLIPAFYSVGRQGNKKP
TGFSEKLWPINGGEWAPASCSYSEIILTGHADGSVKFWDASAGTLQILYKLKCSKVFERR
AGGSCYEEESPLGIQQVALCAESRRLAVALPHGHVVLFKFRKNETHGETHVLEIPMITDT
LEEEGSPEPEGGRSMSFSRAGDASEGDSRRSGVWAGGGGGAGVRVRGAGGTGGARRPPGF
QPTLVALQAGAPHPIAALTINSSYGLMAWGGERGVVVVDVSRRALLAALAPAALYHAPAP
PPAPPRHAERQRSPSLDQLEETPAASPAEPGPDEPPPPDDKAKLDTRRKSTSWKTFNLKR
QLSKVDLKFKAAFAVPTENNLEEVVPEKGNSQFYCEANERTEPPAAATTASTGASTPTPT
PTPTPAPESNTESPDSEELKPASADEEGSGAGSSPLRVCSDVFERMHRELQDKRAGDVYE
RMHRELQERWQAEDGPPRPDSLPLEGPARPPRRARAPPPDRLLSVPNIKYRERPAGGSLG
GLMRRFRELVARLCPRGEPAGEDAAPEQARERRIDKLDSSFSRSRSSSMSSLENISQEGI
QCLAFADSYTKKSDPTTLMPTLWIGTTLGSVLTMTISLPEAELRHTQPVVVSTSGGPLFR
LKGSILTMSFLDCNGALIPYSYESWRDDSKDVRDRRERTPTKQSSSSSGSRMSPTPAADT
AGDRQFVVVASEKQARVVALPSQNCVYRQQIVDTDFVVKAETVSLKDSVCLVNYLSTGHL
VAYSLPSLRPLVDVDFLPLTELGFQTQSKQRGIVDPMLSIWGQQLIVNEDTDQIAKTFCF
SNRGHGLYLASPTEVQKFTIDAEFCQQLNEMIGELFLPRDMPEPPKESFFRGLFGGGSRP
LDREELFGESSGKPSRTVAKHIPGGSAAQLEQLGARAGSASADVARAHMLVLERGDKLSQ
LEDRTERMHSQAAEFSSSAHQLMLKYKDKKWYQL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcacgttcaagggggtgctggacgggttccgcagctcggtgcaggcggca
ccgcgggggaccgagcaggagattcaagagactctgcgtcccgaccacttccaaatcaaa
aagacatttcgacacgggttcccattctcgccgacggcgctggcatgggaccccatacag
aaactgctcgccatcggcgacaaaggcggcaacctcagaatcctgggcgggccgggcgtg
gacgcgcacgtgcggcacgagtgcggcgaggcggtgctgcacgcgcgcttcctcgtcaac
gagggcgcgctcgtcaccgccaccgccgacgaccagctgcacctgtggaccttccgccag
aagtcgccgcagcggctgcactcgctcaagttccagagagagaggatcacgtgcctgcac
ctgccgctcgcctccaagtggatccacgtgggcacggagcgcgggaacgtgcacgtcgtc
aacatcgagaccttcgcgctctccggatacgtcatcaactggaacaaggccattgaagta
acgaggccgaaccaccccggggcggtggtggaaattagtgataatcccctggatgctagc
aagttgctgatagcgttcgagacgggcctggtggtggtgtgggacctgcgcgcgcgcatg
gcggagtggcgcggcgcgctgggcacgggcgggccgggcgagggcgtgcgcgccgccgcc
tggcagcacgacggcaagctcatgaccgcgcacgtggacggcgcgctcgccacctggagc
acgcgcgcgcccagaccctcctcactctcgtacccgcatgcaaaagcgaataaagatggc
aaactggagccttgtaaacctatacttagactggaatggaagacttcgagaacaggcgag
agcctggtgatcttcagcggcgggctgccgacggacaaggcggggcgcacgcacagcatc
acggtgctcaacggcaagtccaccaccgtgctggagatggagcacagcgtcgtcgacttc
gtcacgctctgcgagacgccgcacacggccgactaccaggagccgtacgcgatagtggtg
ctgctgcaaaacgacctggtggtgatcgacctgcagtcgccgggctacccgtgcttcgag
aacccctaccccatggacatccacgagtcgcccgtcacctgctgctcttacttcgccgac
tgcccatcagacttgatcccagcgttctattcagtgggcaggcaaggcaacaagaagcca
acgggttttagtgaaaagctgtggccgattaatggcggcgagtgggcgcccgcctcctgc
tcctatagcgaaattatactcacggggcatgcagacggcagtgtaaagttttgggatgct
agtgcagggaccttacaaattttgtacaaattaaaatgttcaaaagtgttcgagcgtcgc
gcgggcggcagctgctacgaggaggagagtccgctgggcatccagcaggtggcgctgtgc
gcggagtcgcggcgcctggccgtggcgctgccgcacggacacgtcgtgctcttcaagttc
cgcaagaacgagacgcacggcgagacacacgtcctagagataccgatgataacggacacg
ctggaagaggagggctcgccggagccggagggcggacgctccatgtcgttcagccgcgcc
ggcgacgcctccgagggagacagcagaagatcgggcgtgtgggcgggcggcggcggcggg
gcgggcgtgcgcgtgcgcggggcgggcggcacggggggcgcgcggcggccgcccggcttc
cagcccacgctggtggcgctgcaggcgggcgcgccgcaccccatcgccgcgctcaccatc
aactcgtcgtacggactcatggcgtggggcggcgagcgcggcgtggtggtggtggacgtg
tcgcggcgcgcgctgctggcggcgctggcgccggccgcgctgtaccacgcgcccgcgccg
ccgcccgcgccgccgcgccacgccgagcgccagcgctcgcccagcctcgaccagctggag
gagacgccggccgccagccccgccgagcccgggccggacgagccgccgccgcccgacgat
aaggctaagctcgacaccagaagaaaatctacctcctggaagactttcaacctgaaacga
cagctctctaaagtcgatctcaaatttaaagcggccttcgccgtgcctactgaaaataac
ctagaagaggtcgtcccagaaaaagggaactcccagttttattgcgaagctaacgagcgg
accgagccaccggccgcggccacgacggcgtccacgggcgcgtccacacccacgcccacg
cccacgcccactcccgcgcccgagtcgaacacggagtcgccggacagcgaggagctgaag
ccggcgtcggcggacgaggagggctcgggggcgggctcgtcgccgctgcgcgtctgttcc
gacgtgttcgagcgcatgcatcgcgagctgcaagacaagcgcgcgggcgacgtgtacgag
cgcatgcatcgcgagctgcaggagcgctggcaggccgaggacgggcccccgcgccccgac
agcctgccgctggagggccccgcgcggcccccgcgccgggcccgcgcgccgccgcccgac
cgcctgctgtccgtgcccaacatcaagtaccgcgagcggcccgccggcggctcgctgggc
ggcctcatgcgccgcttcagggagttagtagcgcgactgtgcccccgaggcgagcccgcg
ggcgaggacgcggcgcccgagcaggcccgcgagcgccggatagacaaactggacagctcg
ttctcgcgctcccgctccagctccatgtcaagcctagaaaacatctcacaggaaggcatc
cagtgcctagcctttgctgatagctacactaagaagtctgatccgacgaccctgatgccc
acgctgtggatcggcacgaccctggggtcggtgctcaccatgaccatcagcctgcccgag
gctgagctccggcacacgcaacccgtcgtcgtctccaccagtggtggtcccttatttagg
ttaaaaggttcaatcctaacaatgtcgtttctagactgcaatggtgctttaataccttac
tcttacgaaagttggagagacgacagtaaagatgtacgagaccgacgcgagcgaactccc
acaaagcagagctcgtccagcagcggcagccgcatgagccccacgcccgccgccgacacg
gccggggaccgccagttcgtggtcgtggcctcggagaagcaggcgcgcgtcgtggcgctg
cccagccaaaactgcgtctataggcagcagatcgtcgacaccgactttgtggtcaaggct
gaaactgttagcctaaaggacagcgtatgtctggtgaactatctatcgacggggcacttg
gtggcctacagcctgccctcgctgcggccgctggtcgacgtggacttcctgccgctgaca
gagctcggcttccagacacagtccaaacagaggggtatcgtagacccaatgctgtccata
tgggggcagcagctcattgttaacgaggacaccgaccagatagcgaagacattttgcttc
agcaacagagggcacggactatacttagcatcaccgactgaagtgcagaagtttaccata
gacgctgaattctgtcaacagctaaacgagatgataggcgagctgttcctgcctcgcgac
atgcctgaaccccccaaggagagtttcttccgtggattattcggaggaggatctcgacct
ctagacagggaagaattattcggcgagagcagcggcaagcccagccgcacggtggccaag
cacatcccgggcgggtccgcggcgcagctggagcagctgggcgcgcgcgcgggctcggcc
agcgccgacgtggcgcgcgcgcacatgctggtgctggagcgcggcgacaagctgtcgcag
ctggaggaccgcaccgagcgcatgcactcgcaggccgccgagttctcctcctccgcgcac
cagctcatgctcaagtacaaggacaagaagtggtaccagctgtga
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