Trichoplusia ni (cabbage looper): 113499830
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Entry
113499830 CDS
T05757
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113499830
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113499830
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Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
113499830
NCBI-ProteinID:
XP_026736184
UniProt:
A0A7E5W6E9
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Position
13:6024941..6029805
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AA seq
610 aa
AA seq
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MPPTVQTNEPDREKRPQRSGERRTELVTRVKYCNTLPDIPFDLKFITYPFPSTRFIQYNP
TSLEKNYRYEVLTEHDLGVHIDLINRDIYQGDGNALLDPADEKLLEDDILTPQDSKRSRH
HAKNVSWLRRSEYISTEQTRFQPQSMEKVEAKVGYNVKKIFSEETLYMDRESQIKAIEKT
FEDNKKPIEKHYSKPGVTPVEVMEVFPDFDMWKYPCAQVIFDSDPAPVDKNIAGQIEAMS
QAMIRGVMDESGEQFVAYCLPTEETIQKRRRDINENILYMDGDTYEYKMAREYNWNVKSK
ASKGYEENYFLVVRNHCVYYNELETRVRLSKRRARAGAAAQALTRLVVTHRPLSAAEHRM
LRLREKQLEPTQEEDEEEEEEDDDDDDNQRQNREKDRSRSRSKSGSKSPQGSERSKGSNR
SRSGSRERSKSKSKSKSKSRSRSRSGSGSRKSRSRSGSAQSGSARSGSGRSRSRSRSRSK
SGSRASSRASSRASSKSGKGSRASSASRGSRASSKASGKGSRTSSRASSRASSRASKRSS
RASSRASRGSRASSKASGSKASSRASSRKNSASGSGSDRSRSRSGSGSRRGSRSRSGSAS
SASSRHSGSD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccacctacagttcaaacaaatgaaccggacagggagaaacgtccacagcggtcgggc
gaaaggaggacggagctggtgacacgcgtaaagtactgcaacactcttccagatatacct
tttgacttaaaattcattacatatccatttccctcgactcgattcattcaatacaatcca
acctctttggaaaagaactaccgatatgaggttctcacggagcatgatttgggcgtacac
atagatctcataaaccgtgatatttatcaaggagacggtaatgccttattagatccagct
gatgaaaaattactggaagatgatatccttaccccacaagattctaaacggtcgcgtcat
catgccaaaaacgtatcttggttgcgacgttctgagtatatctctacagaacagacgagg
ttccagcctcagtctatggagaaggttgaagccaaagtcggttacaatgtcaagaagatc
ttcagcgaggaaactctatacatggacagggagagtcaaatcaaggctattgagaagaca
tttgaagataacaagaaacccattgagaagcactacagcaaaccaggagttacacccgtg
gaggtcatggaagtgttcccagactttgacatgtggaagtatccatgtgcccaggtcata
ttcgactcggaccctgctccggttgacaagaatatcgctggacagattgaggctatgtct
caagctatgattagaggtgtgatggacgaaagtggagaacagtttgtggcatactgcttg
cccacagaggaaacaatacagaaacgtcgccgtgacatcaatgagaacatactgtacatg
gacggagacacttatgagtataagatggctagggagtacaactggaatgttaaaagcaaa
gcttctaagggttacgaagagaattactttttggtggtacgcaaccactgcgtatactac
aacgagttggagacccgtgtccgactgtcaaagcgtcgcgctcgcgccggcgccgcggcg
caggccctcactagactggtggtcacacaccgaccgctcagtgcggctgaacatcgcatg
ctgcggctcagagagaaacaactggaacctacacaggaggaggatgaagaagaagaggaa
gaagatgacgatgatgatgacaatcaaagacagaacagggaaaaggataggtcgcgatcc
cgatcgaaatcaggttccaaatcgccacaaggatccgagcgatcaaaaggctcaaacagg
tcaaggtcagggtcacgcgagcgatccaaatcgaagtccaaatcaaaatccaagtccaga
agccgctcccgatctggttctgggtcgaggaagtccagatctcgctctggatccgcgcaa
tctggttctgctaggtccggttcgggtcggtctcgttcccgttcccgttccaggtccaag
tccggatcccgagcctcatcccgggcgtcttcccgggctagctcaaagagcggcaaggga
tcgcgcgctagctcagccagcaggggatctagggctagctctaaggctagtggcaagggc
tctcgcacaagttctcgcgccagttcccgcgcgtcatcgcgagctagcaagcgttcgtcc
cgcgcgtcgtcgcgggcgtcgcgaggctcgcgcgcttcatccaaggcgtctggctccaag
gcatcgtcccgggctagctccagaaagaactccgcgtccggcagcggatctgatcggtct
aggagccggtctggcagcgggtctaggcggggatcccgcagccgcagtggatcagcgtct
agcgcctcatctcggcacagtggctccgattga
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