Trichoplusia ni (cabbage looper): 113499869
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Entry
113499869 CDS
T05757
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113499869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113499869
04131 Membrane trafficking [BR:
tnl04131
]
113499869
03029 Mitochondrial biogenesis [BR:
tnl03029
]
113499869
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tnl04812
]
113499869
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113499869
mRNA cycle factors
P-body specific factors
113499869
Membrane trafficking [BR:
tnl04131
]
Others
Actin-binding proteins
Myosins
113499869
Mitochondrial biogenesis [BR:
tnl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113499869
Cytoskeleton proteins [BR:
tnl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113499869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
nSTAND3
DUF2852
YgjK_N
Motif
Other DBs
NCBI-GeneID:
113499869
NCBI-ProteinID:
XP_026736247
UniProt:
A0A7E5W6V9
LinkDB
All DBs
Position
13:complement(10504995..10553506)
Genome browser
AA seq
1823 aa
AA seq
DB search
MTTKELYTKGARIWVEHPEKVWEGACLTSDYRSGVLIVKIDQTNEIRQIKITDEGKMPPL
RNPSLLIGENDLTSLSYLHEPAVLHNLRVRFCDRNAIYTYCGIVLVAINPYYDLPIYGDE
TIMAYRGQSMGDLDPHIFAVSEEAYTKLERESRDQSIIVSGESGAGKTVSAKYAMRYFAA
VGGNASETQVERKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIHFDHMYRISGASMRTY
LLEKSRVVYQSSGERNYHIFYQLCAAARHMPELQLDHQDSFHYLNQGGSPNIDGVDDLRA
FNETKNALSTLGVSESEQQDMFTILSTILHLGNVELSAADPDAEPTDDADDGAFISANDK
HLTIVCSLLGISKAELSRWLTHRRIASAHEVIVSRMEHQRAVFARDALAKRMYGELFAWL
VHAVNRALDTGHAKRHFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQD
EYIKEEISWKMIEFYDNQPCIDLIEDRLGVLALLDEQCRVPQGSDAGFAAKLHQTCCRYP
HYMKPRFGNSAFIIKHFADNVEYQSGGFLEKNRDTVSEEQLECIRSSTCCRLVHAMLAER
QAEASSATLPPPSKRRTTPSVPVTSLTQPGRRASGQKQTVGSQFRLSLSALMATLSATTP
HYVRCIKPNDTKEPFKFDNARAVNQLRACGVLETIRISAAGFPSRWPYQEFFNRYRLLCL
HKEIDRGNIKGTCGKILSRHVKDPDKYQFGATKIFFRAGQVAYLEKVRAELQREYCVRVQ
SCVRRFIARRRYLRLRSALLRLQARARGFLARRKAQEIRRRRAAIKIQRNVRGWLARTKY
QRLRRLAIGLQARARGYLARNLYRDRRRVKAVITVQRYARGYLARQRVKKMRRQIVIAQA
SIRRFLARRQYKRLRIEARSLDHVKSLNKGLENKIISLQQKLGDAMEKAKGIEPLMMQIV
DLKAKVEILRHVETEAKTLRTYIVDKDSLIASLKAELTQERDSNKLLKQEKKTIEEQYEK
NRVAWDEESEKLAVELKSVKEHYELAIEERDKQHEREKNALNAELEAERQSRQKLLSAQY
ELQERIDSLQSKPAAKEHRRSLSDASNNSQQETTVEDDYGYGSVRSVESTRPALEAVNWS
AGSNNGPSPVADAGLVLRMRNRISALQSELSRTTKRAADLEERIMNRNASPPTNPNIDRY
KLEELEIENKKLREHLDRLRAAGDSMLVSKEVIEQMNIMQKELDRRRDECVQLKSVLTNQ
KPWFQALKNVTVNLKSLATSNYGSDVDIINEDGELATAYEAQKGINRQLQEELIAEKKFY
SEHISKAKAETERLREENEKYQKLLSADLSSEPKNKSQEFAQNEIIRLAAESLALQERVD
KLSESCRRYKNQIRLLVNKLKEVGIEDVNDILDNNDSVVPPNASMTLEMAPVTRKKEREY
LGMFEYKIQDEGIIIKKLISDLKPKIAVTLLPGLPAYILFMMLRHMDHVDDEPKMHQLMK
AVRTAVKKTLKKRAESVEYNALWLANMLRLLNNLRQYSGDTVYQSGNTPRQNQQCLRIFD
LSEYRQVLSDIAVWIYQGLILLLERQLERLIVPAILEHEEISGLSGPSARPPQPGAGPQR
LKQELSATHAHLHTYAVDQPLRLMIFKQLFYYICAYSLNQLLLRKDLCCWAKGLQIRYNI
SHLETWIKEHLAEYGQKSVEEILGVLKPITQAVQLLQARKSMQDVQSTVDMCANLNAMQV
CKILNMYTPAEEYEVKVTREFIHEIQKKMQEKAGTNPDKEPQNLLMDSKMIFSVQFPFNP
SPIRLEAIELPEVLEMDGLLTKI
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaggagctgtataccaagggtgcccgaatatgggtggagcacccagagaag
gtgtgggagggcgcctgcctcacctcggactaccgctccggggtgctcatcgtgaagata
gaccagaccaacgagatacgccagatcaagatcacggatgaagggaagatgccgccatta
cggaacccttcgcttctcattggagagaatgacctcacatccctctcatatcttcacgaa
cctgctgtactacataacttgagagtccggttttgcgatcgcaacgccatctacacatac
tgcggcatcgtgttagttgcaatcaatccttattacgatttacctatttacggtgatgag
acgatcatggcgtaccgagggcagtcgatgggcgacctggacccccacatcttcgcagtc
tccgaggaggcctacaccaagttggagagggagagtcgagaccagagtattatagtgagc
ggcgagtcaggtgccggcaagacggtgtcagctaagtacgcgatgcggtacttcgcggct
gtgggcggcaacgctagcgagactcaggtcgagcggaaggtgctagccagcagtcctatt
atggaggctattggcaacgctaaaacaacccgcaacgacaactcgtcccgcttcggcaag
ttcatagagatccacttcgaccacatgtaccggatatccggggccagcatgcggacctac
ctcctggagaagtccagggtcgtgtaccagagctcgggcgagaggaactaccatatattc
taccagttatgcgccgctgctaggcatatgccggaattgcaattggatcatcaagactca
tttcactatttgaatcagggcgggagtcctaatattgatggtgtggacgatttgagagcc
ttcaatgagactaagaacgctttgagcactctgggagtatcagaatcggaacagcaggac
atgttcacgatcctgtcgactatcctgcacttggggaacgtggagctgagcgcggccgac
cctgacgcggaacccactgacgacgctgatgatggagcatttattagtgcgaacgacaaa
cacctaacaatagtttgctcactgttgggcatatcgaaagccgagttatcccgctggcta
acccaccgccgtatagcctcagcccacgaagtcatagtttccagaatggaacaccagagg
gcggtgttcgcgagagacgctttagctaaacgcatgtacggagagctgtttgcttggcta
gtacatgctgttaacagggcattggatacaggacatgcgaagaggcattttattggcgtc
ctggacatctacggcttcgagaccttcgagatcaactccttcgagcagttctgcatcaac
tacgcgaacgagaagctgcaacagcagttcaactcgcatgtcttcaagttggagcaggac
gagtatattaaggaagagatatcatggaagatgatagagttctacgacaaccagccgtgt
atcgacctgatcgaggaccggctgggggtcctggcgctgctggacgagcagtgtcgggtc
ccgcaggggagcgatgccgggttcgccgccaagctgcaccagacctgctgccggtacccg
cactacatgaagcccaggttcgggaactcagccttcatcatcaagcacttcgcggacaac
gtggagtaccagtcaggcggcttcctggagaagaaccgggacacggtgtctgaggagcag
ctggagtgcatcaggtcctcgacctgctgccgcctggtgcacgccatgctggcggagcgc
caggccgaggcctcctccgcgacgctgccgcccccctccaagaggaggaccacgccctcc
gtgcctgttaccagcttgactcaaccaggtcgccgcgcgtccggccagaaacaaaccgtt
ggctcccagttccgtctgtcgctgtccgcgctcatggcgaccttatctgctacgacgcca
cactacgtacgatgtatcaaacccaatgataccaaggaaccgttcaaattcgataacgca
agggctgttaaccaactaagagcatgtggtgtattagaaactataagaatatcagcggcc
ggcttcccatcgagatggccataccaagagttctttaacaggtatcggcttctctgcctc
cacaaagagattgaccgcggcaacatcaaaggcacgtgcggcaagatactgtcgcgccac
gtcaaggaccctgataagtaccagtttggtgccaccaagatattcttcagagccgggcag
gtggcctacctagagaaggtccgcgcggagttacaacgcgagtactgcgtgcgagtgcag
agttgtgtgagacggttcatagcgcgacgcaggtacctgcgcctgcgcagcgcactgctg
cggctgcaggccagggctagggggttcttagccaggagaaaagcacaagagatccgtcgt
cgccgagccgctatcaagatccagcgaaacgtccgcggctggttagccaggaccaagtac
cagcggcttcgtagactagcgatcggcttgcaggcgagggccagggggtacctagcccgg
aacctgtatagagataggaggagggtgaaggcggttataaccgtacaaaggtatgcgcgc
ggctatctcgctcgccagcgtgttaagaagatgagacggcagatcgtcatcgcacaagca
tctatacgtcgcttcctcgcccgtcgtcaatacaagcgcctacgcatcgaggctcgcagt
ctagaccacgtcaagtcattgaacaagggtctggagaacaagatcataagtcttcagcag
aagctcggcgatgcgatggagaaggctaaggggatagaaccgctcatgatgcagatcgta
gacctcaaagccaaagtagaaatcctaagacacgtcgaaactgaagctaagactctacgc
acatacattgtagacaaggacagccttatagcctctcttaaagcagagctcacgcaggaa
agagacagcaacaaactgctgaaacaagagaagaagacgatagaagagcagtatgagaag
aacagagtagcgtgggatgaagagagtgagaaactagctgtcgagttgaagagtgttaag
gaacattatgagttggcgattgaagaacgagacaaacagcacgagagagagaagaatgct
ttgaacgcagaacttgaagcggagagacagagtcggcaaaagttgttatcagcgcaatat
gagttgcaggagagaattgactcgctacaaagtaaaccggccgccaaggaacacaggcgt
tctctatcagacgccagcaacaactcgcaacaggaaacaacggtcgaagatgactacggt
tacgggtcggttagatctgtggagagcacgcgaccggcgctggaggctgtcaactggtcc
gcagggtcaaacaatggcccttcaccggtggccgacgcaggcctagttctgcgcatgcgc
aacaggatctcagcgttacagagcgaactctctcgcaccacgaagagagctgctgacctc
gaagagaggattatgaaccgcaacgcctcgccgccgaccaatccaaacatagaccgttac
aagctagaagagttggagattgagaacaagaagctgcgagagcatctggaccggctgcgg
gccgcgggagactccatgctggtgtctaaagaggtcatagaacaaatgaatatcatgcag
aaagagcttgacaggcgaagagacgaatgcgttcaactaaagagcgttttaacaaatcag
aaaccgtggttccaagctttgaaaaacgtcacggtgaatctaaagtcgctcgctacctcc
aactacggctccgatgtggatatcatcaacgaggatggcgagctggcgaccgcttacgaa
gcacagaagggtattaacagacaattacaagaagagttgattgctgagaagaaattctat
tcagagcacatatctaaagcgaaagcggaaacggaaagactcagagaggagaatgagaag
tatcagaaattactgagtgctgatctcagttcggaacccaagaataaatctcaagagttc
gcgcagaacgagattataagactagctgctgagagtttggcgttacaggagcgagtagac
aagctatcagagagctgtcgccgttacaagaatcagattcgtttgctcgttaacaagttg
aaggaagtcgggatagaagatgtcaacgatatattagataataatgactcagtggtgccc
cctaacgcgtcaatgacactagagatggcgccagtcacgcgcaagaaagagcgcgaatat
ctcggaatgttcgagtacaagatacaagacgaggggatcatcatcaagaagctgatcagc
gacttaaagcccaaaatcgcagttacactcctgccgggcctccccgcctacattctcttc
atgatgcttcgacacatggaccacgtagacgatgaacctaagatgcatcagctgatgaag
gcagtcaggactgctgtcaagaagacgctcaagaaacgggcggaaagcgtcgagtataac
gcgctttggctcgctaatatgctcagactcctgaacaacctgcgccagtacagcggcgac
acagtgtaccagagcggcaacaccccgcgccagaaccagcagtgtctgaggatcttcgac
ctgtctgagtacaggcaggtgctcagcgatatagctgtctggatataccaagggctgatc
ctgctcctggagcgtcagctagagcgcctgatagtcccggccatcctggagcacgaggag
atcagcgggctgtcggggccgagcgcgcggcccccgcagcccggggccggcccccagcgt
ctcaagcaggaactgtccgccacacacgcgcatctacacacctacgctgtcgatcaaccg
ctcagacttatgatatttaaacagttgttctactacatctgcgcgtacagcctcaaccag
ctgctcctccgcaaggacctgtgctgctgggccaagggtctgcagatcaggtacaacatc
tcccatctcgagacctggatcaaagagcatctggctgagtacggacagaaaagcgtggag
gagatcctgggcgtgttgaagcccatcacgcaggcggtgcagctgctgcaggcgcgcaag
tccatgcaggacgtgcagagcactgtggacatgtgcgccaacctcaacgccatgcaagtc
tgcaagatcctgaacatgtatactccggccgaggagtatgaggtcaaggttacgcgcgag
ttcattcacgagatccagaagaagatgcaagagaaagctggcactaaccctgacaaggaa
ccgcaaaaccttctaatggactccaagatgatattctcggtgcagtttccattcaatccc
tccccaatcagactggaagcaatcgagctaccggaagtactagaaatggatggtcttctc
accaagatatag
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integrated database retrieval system
