Trichoplusia ni (cabbage looper): 113500010
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Entry
113500010 CDS
T05757
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein homolog
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113500010
Membrane trafficking [BR:
tnl04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
113500010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5_insect
zf_RING_Vps8_fungal
zf-RING_5
zf_RING_Vps8
zf-RING_2
WD40_CDC20-Fz
zf-C3HC4_2
zf-RING_Vps41
Beta-prop_EML_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
113500010
NCBI-ProteinID:
XP_026736453
UniProt:
A0A7E5W720
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All DBs
Position
13:2992059..3003687
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AA seq
1014 aa
AA seq
DB search
MSRNNLPPYVLQEIPDITESINYPIKNVQRIKYTCFDVSKSLIAFGATSGGIYIFNREPC
EFVQLIPNKDGAITRLAISLDERHVGFANGRGLGTIAGCNQSLSGGHSTVTSKEHQGNEI
TAMIWSANHMLFMGDDVGKISVLQPQNFIAKTMFQSSSLTIMSLDSRICQLDMKSSMLLV
STLTRCYVCDTSREQYRQIGQKPRDGEYGACFVDKQKNNEQQTTNTAQDFTEVRRYNIVS
DDSGFAVGKDLQNTLIFCARPSSRVWEATVDGSVIRTHQFKQVLARKPMKIISYDSYQNE
KIELDNVVKEGEGQSVNFPKIISTNGAIFSFKKNALYFLNVSDVDHTIWFDKYKDIVDCK
VYHDMVYIWLSSGSLVNLRFMKIEKFLVKCYVEEKYLLCAELCALFSDYLLTNNLSPKLH
ILVSLKDKLNNEELLNRIQDVLAKFEGLKSNDATQMKSGIYIVDNTYHAQSSLLDTDARS
NEDFKLTLPPETLQTLKDLSVSVSDKLNSSKKILKEKWEDFEGKMKHLSVDKHHEVKDTP
IIEKQTHILNNTKILPDDSIKLTPLVLENDIIYKESSQKAIDVDNNALEKDKESKCLYQY
YKLSIVGKKTDQSNLVSTIENFTCDISQIYSLMLQLERYCINIGSYDESKFVPNHIFLSY
LNESTRKEELLDSIIKDETLYKYFVDSCISVNVKNQKLSNIGCDCGFPLPYSRTLQTPVF
SDLIDEFIERQWSNQTRNQCYDICKRMPYLWRKILYLRRNEDLLNILRILLQMLDENLLH
TFLPGFTLDTWERAVQLYATLHANICLNCSKKFDHISVRETLSWDDLGALMIKSIGGRNA
IKVMEKYASLIDAGAITVKFYHTCLMVTMYERYDVTITGPMTDTLYSAYTFEDCRIEICK
LLRSTLNGQTKNTALPLIVAAKSQHWGLKPLTETTTENESEECNIKNVSIDHILDNLSHI
NNGVTDCVLCGLPLQNTVLLQDGGLWVFKCGHTFHGSCLELNKVKLCPSCSPVK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaacaatctaccgccatatgtactgcaagagattccagatatcacagaaagt
ataaattatccgataaaaaatgttcaacgtataaagtacacttgtttcgatgtatcaaag
tccctaatagcctttggagctactagcggtggtatctacatatttaaccgcgagccatgt
gagtttgtacaacttataccaaacaaggatggtgctatcacacgattggccatatcgtta
gacgagaggcacgttggtttcgcaaatggccgaggtttgggaaccatagcgggatgcaac
cagtcacttagtggcggtcactccactgtcacatctaaagagcaccaaggcaacgagatc
actgcgatgatatggagtgccaatcatatgctgttcatgggtgacgatgttggcaaaata
tctgtattgcaacctcagaactttattgctaaaacaatgttccagagttcttcattaaca
ataatgagcttagattcccgtatctgtcaactggatatgaaatcaagtatgttgcttgtg
tccacactaacaagatgttatgtctgtgacacatcccgggaacaatacagacagattggc
cagaagccaagagacggcgagtatggagcttgcttcgtcgacaaacaaaagaacaacgaa
caacagacaacaaatactgcacaagatttcactgaagtaagaagatataatatagtgagc
gatgactccgggtttgctgttggcaaagatctgcagaacactctcatattctgtgcaaga
ccgtcgtccagagtatgggaagctactgtagatggttccgttataagaactcatcaattc
aaacaagtactcgcaaggaaaccaatgaaaatcatctcatatgactcataccagaatgaa
aaaatagaattggataatgtagtcaaagaaggtgaaggacaatccgtaaattttccgaaa
attatatcaacaaatggtgccatattctcatttaaaaagaatgctctgtattttcttaat
gtcagtgatgttgatcatacaatttggtttgataaatacaaggatattgttgattgtaag
gtgtatcatgatatggtgtatatatggctgtcaagcggctctctagtgaacttgaggttc
atgaaaatagaaaagtttttagtcaaatgttatgtggaagaaaagtatttattgtgtgcg
gaactgtgtgccttgtttagtgattatttgctgactaacaatttatcacctaaattacat
attttggtaagtttaaaagataaattgaataatgaagagttgctgaataggattcaagat
gttcttgccaagtttgaaggtttgaagtccaatgacgctacacagatgaagtctggtata
tacatagttgacaacacatatcacgcgcaatcatcacttctagacacagatgcaagaagt
aatgaagacttcaaattgacattgcctccagaaaccttacagacattaaaagacctgagt
gtcagtgtatcagacaaattaaatagtagcaagaaaatattgaaagagaaatgggaagat
ttcgagggcaaaatgaaacatctcagtgtggacaagcatcatgaagtaaaggatacacca
attatagaaaaacaaacacatattttgaacaatacaaagatactaccggatgattctata
aaactcaccccgcttgtgttagaaaacgatataatttacaaagaatctagtcaaaaggcc
atagatgtagacaataatgctttagaaaaagataaagagagcaaatgtttgtatcaatat
tataaattaagcatagttggtaagaaaacagatcaatcgaatttagtttctactatcgaa
aatttcacctgtgatattagccagatctactcccttatgttacaattagaaaggtattgc
attaatataggctcgtatgatgaatctaaatttgtaccgaatcatatttttctcagttat
ctaaacgaatcaacgaggaaagaggaattacttgattctataattaaagacgaaacgtta
tacaaatactttgtagattcgtgtatatctgtgaatgtgaagaatcaaaagctatcgaat
ataggttgtgactgcgggttccctttgccctactcaaggacgctacaaactccagttttc
tctgaccttatcgacgaatttattgaaagacaatggtccaatcaaacaaggaaccaatgt
tacgatatttgcaaacgcatgccttacttatggaggaagatattatacttgaggagaaat
gaagacttattgaatattctgaggatattgcttcaaatgttggatgagaatttgctccat
actttcctacctggattcacacttgacacttgggagagagctgttcagctatatgcgact
cttcatgctaacatatgcttaaattgctcaaagaagtttgatcatatatctgtgagagaa
acgttaagttgggacgatcttggggctctgatgatcaagtctattggcggtaggaatgct
ataaaagttatggagaagtatgcgagtcttatcgatgctggagctatcactgtcaagttc
taccatacatgtctcatggtgactatgtatgagagatatgacgttactattactggacca
atgacggacacgctttacagtgcgtatacttttgaagattgtagaatagagatttgcaaa
ctactacgtagcacactaaatggccagacgaaaaatacagcgctgcctttgatcgtcgca
gccaaatcccaacattggggtctcaaaccgctcaccgaaaccacaacggaaaacgaaagt
gaagaatgcaatataaaaaacgtatctatcgaccatattttagataatctatcccatatt
aacaatggcgtaactgattgcgtgctctgtgggttgccattacaaaatactgtcttactc
caagatggcggactctgggttttcaagtgcggtcacacttttcatggatcatgtttagaa
ttgaacaaagttaagctttgcccttcttgttcacctgttaaatga
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