Trichoplusia ni (cabbage looper): 113500020
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Entry
113500020 CDS
T05757
Name
(RefSeq) probable nucleoporin Nup58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113500020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113500020
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113500020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
MIS13
Motif
Other DBs
NCBI-GeneID:
113500020
NCBI-ProteinID:
XP_026736465
UniProt:
A0A7E5W738
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Position
13:2248666..2256155
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AA seq
553 aa
AA seq
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MSFSFGTPSSAPATTGLAGGFNFGANKPATPGFGLTATSQPATGLFGSTQSTETPAFGST
GFGATSAAPAFGATTTPAFGTGTPAFGSTSAAPAFGTAAPAFGATAPTNFGATATPAFGA
SAAPTFGATTAPAFGTTGLGTGGLNFGAGAGTATSNTGLSFGAPASSANTTGLGGLGSFG
FNTTATTQSTGFGAFGSTTSTTTTTNTLFGPNLSTSSSKQIPSSGTPSYGLSQVANTSGI
GVNNKSEPPKQNKLPNEISTMVDTFKEFVKKQKSLSSEVMRVSVKPLHKVSREAESILRE
VLSLSGEVSRGRAHSRRLRAAAAAALAAAEAAVWDYTTPGSELEGTAPPAYVKELIAELE
QQLITFRRQMDVADKQMQSSPKLLTEQELTLGIRRMHESLVALAGRLQAVHAAVARQKDQ
YLNLRKYVLKDPTNVFDTPDPSNSLDQILRDAETNKKKMKPNAFADISLGSAVISDPRAA
LGNLQQLAGPTPFTYIGSTLSPFPTADTSGPNWQPQSQPTLNTSFNTSGFGMTAVDNSSG
FQLQKPPGKRGKQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcatttggtaccccgtcaagtgcgcctgcaacaacaggtcttgcaggagga
tttaactttggcgctaacaaaccagccacgcctgggtttggattgactgcaacatcacag
cctgcgactggactgtttggaagtacacagtcaacggagacgccagcgtttggttccact
gggtttggggctacgtccgcagcgcccgcctttggcgcgactacaactcctgccttcggg
actgggacgccagcatttggttcgacttctgcggctcctgcttttggcactgctgcacca
gcttttggagccacagcaccaacaaattttggagctactgcaacaccagcttttggagca
agtgcggctcctacatttggtgctacaactgcaccagcctttggtaccactggacttggt
accggaggtctaaactttggagctggggctggtactgcaacttctaacacagggttaagt
ttcggtgccccggccagttcagcaaacacaacagggcttggtggtttaggcagctttggg
tttaatactactgccactactcaaagcactggctttggagcatttggtagtaccacaagc
actaccacaactactaataccctttttggaccaaatttgagtacatcttctagcaaacaa
ataccaagttcaggaactcctagctatggattgagccaggtcgccaacacaagcggtatt
ggagtgaataataaaagtgaaccaccaaagcaaaataagctgccaaatgaaatatcaact
atggtagacactttcaaagagtttgttaagaaacaaaaatcactgagttctgaagtaatg
agggtgtcggtcaaaccattgcataaggtgtcccgcgaggcggagtcgatcctgcgcgag
gtgttgtcgctgagcggcgaggtgtcccgcgggcgcgcgcactcgcggcggctgcgggcc
gcggccgccgccgcgctggccgccgcggaggccgccgtctgggactacaccacgcccggc
tctgaattggaagggacagctccacctgcttacgtaaaggagttgattgctgagttggaa
cagcaacttatcactttccgtagacaaatggatgtcgctgacaaacaaatgcagtcgtcg
cctaaattacttactgaacaagagctgacgctgggcatccggcgcatgcacgagtcgctg
gtggcgctggcggggcgcctgcaggccgtgcacgccgccgtggcgcgccagaaggaccag
tacctcaacctgcgcaagtacgtgctcaaggaccccaccaacgtcttcgacacgcccgac
ccaagcaatagtctcgaccaaatactacgtgacgctgagacgaacaaaaaaaaaatgaag
ccaaacgctttcgcggacattagcctcggcagcgctgtcatctctgatccgagagcagct
ttaggtaacctacaacagttggcaggcccaacgcctttcacgtacatcggcagcacattg
tcgccattccctacggctgatacaagtggtccaaattggcaaccgcagtcgcagccgacc
ttgaacacgtcctttaacacgagcggctttggaatgactgcggtcgacaactcgtccggc
tttcagctgcagaagccgcccgggaagcgcgggaaacaatga
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