Trichoplusia ni (cabbage looper): 113500072
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Entry
113500072 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113500072
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113500072
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Helicases
113500072
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Neuropeptide_S
Motif
Other DBs
NCBI-GeneID:
113500072
NCBI-ProteinID:
XP_026736543
UniProt:
A0A7E5W7A4
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Position
13:complement(1912073..1915037)
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AA seq
808 aa
AA seq
DB search
MKQESKGPKKHGNKKKVQLYKPRKKKSVEEDAAIQYLQAQYDKINPAEIKTFKDFPLSQK
TLKGLKENNYVTPTEIQKQAIGYALQGKDILGAARTGSGKTLAFLIPILENLFCKKWTRL
DGVGALVISPTRELAYQIYEALRKVGHLHDFSAGLIIGGQNLKFERKRMDQINILICTPG
RLLQHMDENPLFDCSHLQILVLDEADRCLDMGFETTMNAIIENLPPERQTLLFSATQTKS
VKDLARLSLSYPTYVAPHEQADTVTPESLQQSYIVCEVDEKIGILWSFIKNHLKQKVLVF
MATCKQVKYTYELFCKLRPGVSLLALYGTLHQEKREKIYNEFCRKSNVVLFATDLASRGL
DFPRVNWVIQMDCPENVDTYIHRAGRTARGFFGKGEGLLMLLPHEEKLVEDLQKSKIPIN
KIAVDPSKVVAPQRKIESLLSDSTELKQSAQRAFVSYLKSVFLMKNKEIFNVQLLDTDAY
ARSLGLIVPPYIKFLKKHQYSQKKQDDDVINKLKFKTESDEDTEQSAHEDDDESVMEAGN
IGKNSKKKEPIVKFDFHNEADSDEEDFLQVKKVDVNPDNEPIEELEVENLISKKKGKPLT
KAAVAKKLLKKKIKVNTTVKFTEDGDAIGDEKRDVKSELAKQFLNENVGGIDIEKAKEVL
QEEDKFDKIRFREKVKAKHKEQKRKLKNKNKEDDGDKDEFGSDSESDGPDLSWLPDPDKH
YGPANDSDNDDNSDEGSGSESSDQAESGNNSEVDQKYHRPTKRKLVENKGIPQASVAPRK
VKKIQDISSSLSMHEAEALAMQLLQAKR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaaagcaagggaccgaaaaagcatggcaataagaagaaagttcaattgtat
aaacccaggaagaaaaagagtgtcgaggaagatgcagccatacaatatttgcaagctcaa
tacgacaagatcaatcctgcagaaataaaaacttttaaagatttcccgctttcacaaaag
acgcttaaagggctcaaagaaaataactatgttactccaactgaaatacaaaagcaggcc
ataggctatgctctgcagggaaaagacatcttaggagcagctagaactggatcagggaaa
acactagcatttttgattcccattctagaaaacctattttgtaagaaatggacaagatta
gatggtgttggggcactagttatatcacctactcgagaactggcctaccagatatatgaa
gctctacgaaaagtgggacacttgcatgatttctcagctggtttaattataggaggacaa
aacttaaaatttgaacggaaaagaatggatcaaataaatatattaatttgtacacctggt
cgtcttttgcaacacatggatgaaaaccctctgtttgactgtagccaccttcaaattctt
gtcctggatgaagctgacagatgtttggatatgggatttgagacaactatgaatgctatc
attgaaaatttgccacctgaaagacaaacattactattctctgccactcaaaccaaatca
gtaaaagatcttgctaggctcagtttgtcatatccaacatatgtggcgcctcatgagcaa
gccgacactgtcacacctgagtcactccagcagagttatattgtatgtgaagttgatgaa
aaaattggcattctttggtcatttattaaaaatcacttgaaacagaaagtattggtgttc
atggccacatgtaaacaagttaagtacacatatgagttgttctgcaaactcaggccaggt
gtgagcttactagcactgtatggtactttacatcaagaaaagcgggaaaagatctataat
gagttttgcagaaagtctaatgttgtgctgtttgccacagatttagcctcacgaggatta
gactttcctcgtgttaattgggttatacaaatggattgtccagaaaatgtagacacctac
attcatagagctggccgtactgctagaggattttttggcaaaggagaaggtcttttaatg
cttttacctcatgaagagaagttagttgaagatctacaaaaaagtaaaatccctattaac
aaaatagctgtagatccatctaaagtagttgccccacagagaaagatagaaagtctactt
tctgacagcacagaactaaagcagagtgctcagagggcttttgttagctatttgaaatct
gttttcttaatgaagaataaagaaatctttaatgttcagttactagatactgatgcatat
gctagatctttaggtttgattgttccaccctatatcaagttcttaaaaaaacatcaatat
tctcagaagaaacaagatgatgatgttataaataaattgaaatttaaaactgaatctgat
gaagacactgaacaaagtgcccatgaagatgatgatgagtcggttatggaagctggtaat
attggtaaaaattcaaaaaagaaggaaccaattgttaagtttgattttcataatgaggct
gacagcgatgaagaagactttttgcaagtgaaaaaagtggatgtgaatcctgacaatgaa
cccatagaagagttagaggttgaaaatctaatatcaaagaagaaaggaaaacctcttacc
aaagcagcggttgctaagaaactattaaagaaaaagataaaagttaacacaaccgttaag
tttactgaggatggagatgcaataggagatgaaaagagggatgtcaagtcagaactagcg
aaacagtttttgaatgaaaatgtgggaggaatagatatagaaaaagctaaggaagtttta
caagaagaagataagtttgataaaataaggttcagggaaaaagttaaagcaaaacacaaa
gaacagaaacgtaagctcaagaacaaaaataaagaagatgatggtgacaaagatgagttt
gggtctgattcagagtctgatggacctgatctctcttggctgcctgaccctgataaacac
tatggccctgccaatgacagtgataatgatgacaactctgacgagggtagtggttctgag
tcatcagaccaagcagaatctggaaataattcagaagtagatcaaaaataccatagacct
acaaagcgaaaactggtggagaataaaggcatcccgcaagcgagcgtggcgccgcgtaag
gtcaagaagattcaggacatatcttcgtcgctgtctatgcacgaagcagaagctctggct
atgcagctgctgcaagctaaacgatag
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