Trichoplusia ni (cabbage looper): 113500207
Help
Entry
113500207 CDS
T05757
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
tnl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113500207
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113500207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113500207
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
113500207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
113500207
NCBI-ProteinID:
XP_026736716
UniProt:
A0A7E5W943
LinkDB
All DBs
Position
13:complement(4583721..4595982)
Genome browser
AA seq
745 aa
AA seq
DB search
MVEGGVDIDLYADDIESDFNRQDDFGGENVDLYDDVIAAPATKPDDGDGPPNPAPQHQHP
PEETNGSVPYHNNASNHGHHGRRFQLYVGNLTWWATDQDIANAVGDIGVTDFQDVKFFEN
RANGQSKGFCVISLGSDQSIRMVMDRLPKKEIHGQHPVVTLPTKQALNQFESQSKTRSTP
PGPNNPGMRGPHPGGPPGPHPGEFFGGGPNGPGGNGPRMMMAGGAPHHPLRGPAGGHHGH
GPHPHGPPHHLPQHQGPPPHHLPHQGPPPHQGPPPRGPPMQVSFNFLFLRKIYFEDLYDC
RIFMKQFQGPPQLQRGPGGPGGPGGPGGRPGPDWGPRGPPQQLPPHPAPQYGPPQHQMPH
QMPPPHPGGGAGLPPGHAGLAVPRGPAPLPHHPGMPPYQGVGGGAPAPHVNPAFFAQQPP
VQPQPTVQPPPQPGPPGPGAPYGHPAHGPPPTTQGPPPTARQPYGRPPQSYPAAAEGGRG
AHHGGALAHGAHPAHAPHAPHAPHAAHAPHAAHAPHAGISEAEFEEVMSRNRTVSSSAIA
RAVSDAAAGEYASAIETLVTAISLIKQSKVAHDDRCKILISSLQDTLHGVETKSYGSGER
RRSRSRDRDARAHHRAPRRRDRSASRYRDRSRDRDERDRYRERSRERDRERDRDAYYRDY
RDRERDRSRSRERERADHYNRGHSREERPRKSPVEPAAEGGAGDAAGAKSRAAAAPYYDE
RYRERRDREPPPPERERDHRRDARH
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaggaggcgtggatatagatttatacgccgacgatattgaatctgattttaat
cgtcaggacgatttcggcggtgaaaatgtggatttatacgacgacgtaatcgccgcgcca
gcaacaaaaccggacgacggcgatggacctccgaacccggcaccgcagcaccagcatcct
ccggaggaaaccaacggcagcgtcccctatcacaacaacgcatcaaaccacggccatcat
ggccgccgttttcaactttacgtcggcaacctaacttggtgggcgacggaccaagacata
gctaacgccgtcggagacattggcgttactgatttccaagacgtgaagttcttcgagaat
agggcgaatggacagtcgaagggattctgcgtcatatccctcggctcagaccagtccata
aggatggtaatggaccgactgcccaagaaagagatacacggacagcatccagtcgtcaca
ttacccactaaacaggcattgaaccagtttgagagtcagtctaagactagatcaacccca
cccggccctaacaatccgggtatgagaggaccacacccaggcggaccgcctggaccacac
cctggagaattcttcggcggaggtcctaacggaccaggcggcaatgggccgcgcatgatg
atggccggcggcgcgccccaccacccgctgcggggcccggcgggcggccaccacggccac
gggccgcacccgcacggcccgccgcaccatctgccgcagcaccagggcccgccgccgcac
catctgccccaccagggcccgccgccgcaccagggcccgccgcccagggggccgcccatg
caggtatcattcaactttttgtttcttagaaaaatctactttgaagatttatatgactgc
cgtatttttatgaaacagttccaaggcccgcctcagctgcagcgcgggccaggcggcccc
ggcgggccaggcgggccgggcggccggccgggcccggactggggcccacgcgggcccccg
cagcagctgccgccgcaccctgcgcctcagtacggacccccacaacaccagatgcctcac
caaatgcccccgccgcacccgggcggcggagcgggcttgccgcccgggcacgcggggctg
gccgtcccgcgcggcccggcgccgctgccgcatcacccaggtatgcccccctaccaaggc
gtgggtggcggggcgcctgctccccacgtgaaccccgcgttcttcgcgcagcagccgccc
gtacagccgcagcccacggtgcagccgccgccgcagcccggacctcccggtcccggagct
ccatatgggcacccagcgcatggcccaccgccaaccacgcagggtccgccgcctactgct
agacaaccctacggaagacctccacaaagctaccccgcggcggcggagggcgggcgcggc
gcgcaccacggcggcgcgctggcgcacggcgcgcaccccgcgcacgcgccgcacgcgccg
cacgcgccgcacgccgcccacgcgccgcacgccgcgcacgcgccgcacgccggcatcagc
gaggccgagttcgaggaggtcatgtcgcgcaaccgcaccgtctcctccagcgccatcgcg
cgcgccgtcagcgacgccgccgccggcgagtacgcctccgccatcgagacgctcgtcacc
gccatctcgctcattaagcagagcaaggtggctcacgacgaccgctgcaagatactcatc
tcatcgttacaagacacgctgcacggcgtggagaccaaatcttacggcagtggcgagagg
cggcgctcccgctcgcgagaccgcgacgcgcgcgcccaccaccgcgcgccgcgccgccgc
gaccgctccgcctcgcgctaccgggaccgcagccgcgaccgcgacgagcgagacaggtac
agggaacgttccagggaacgtgatcgtgaacgcgaccgcgatgcgtattacagggattac
cgtgaccgcgaacgtgacaggtcccgctctagggaaagggaacgtgcggatcactacaat
aggggtcacagtcgagaggagaggccgcgcaagtccccggtggagccggcggcggagggc
ggcgcgggcgacgcggcgggcgccaagtcccgcgcggcggccgcgccctactacgacgag
cgctaccgcgagcgccgcgaccgcgagccgccgccgcccgagcgcgagcgggaccatcgc
cgcgacgcccgccactag
DBGET
integrated database retrieval system
