Trichoplusia ni (cabbage looper): 113500325
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Entry
113500325 CDS
T05757
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03030
DNA replication
tnl03410
Base excision repair
tnl03420
Nucleotide excision repair
tnl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113500325
03410 Base excision repair
113500325
03420 Nucleotide excision repair
113500325
03430 Mismatch repair
113500325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnl03032
]
113500325
03036 Chromosome and associated proteins [BR:
tnl03036
]
113500325
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113500325
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113500325
DNA Replication Termination Factors
ELG1-RFC complex
113500325
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113500325
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113500325
Check point factors
HRAD17(Rad24)-RFC complex
113500325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
MeaB
AAA_19
AAA_11
AAA_18
Mg_chelatase
nSTAND3
RuvB_N
AAA_24
Rad17
IstB_IS21
AAA_assoc_2
NTPase_1
MipZ
AAA_25
ABC_tran
AAA_5
AAA_3
AAA_30
RNA_helicase
CbiA
DNAX_ATPase_lid
AAA_28
AAA_23
AAA_7
ATPase_2
Motif
Other DBs
NCBI-GeneID:
113500325
NCBI-ProteinID:
XP_026736875
UniProt:
A0A7E5W8B9
LinkDB
All DBs
Position
13:10674229..10676954
Genome browser
AA seq
352 aa
AA seq
DB search
MSDTDVMEVDEIPSKPSKSQVGSSGSKAVSHLPWIEKYRPITFSDVVGNEDTVSRLAVFA
RTGNAPNIIIAGPPGVGKTTTILCLARALLGASFRDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPPGRHKMVILDEADSMTEGAQQALRRTMELYSHTTRFALAANNSEKIIEPIQSR
CAVLRYSRLTDAQILAKVLEVCEKEQLSYTEEGLNAVVFTAQGDLRAALNNLQATAQGFA
HVSADHVFKVCDEPHPMLVRGMLAACARRDIHEAYKVIAKLCKLGYAAEDIVSNVFRVCK
TLDVDEATRLAFAREVGLTQLRVADGLSSPLQLAGLLARCCRAAAPPPRSGF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccgatgtaatggaagtggatgaaataccatcaaagccttccaagtcccaa
gttggcagcagcggctcgaaagcagtatcccatttaccgtggatagagaagtaccggcct
ataacgttcagcgatgttgttggcaatgaggacaccgtgtcgaggctggccgtgttcgcg
cgcacggggaacgcgcccaacatcatcatcgcgggcccgcccggcgtgggcaagaccacc
accatcctatgcctggcgcgcgcgctgctgggcgcctccttccgcgacgccgtacttgag
ctcaacgcctctaacgaccgcggcatcgacgtcgtgcgcaacaagatcaagatgtttgca
caacaaaaggtgacactaccacctggacgacataagatggtgatcctggacgaggcggac
agcatgacggagggcgcccagcaggcgctgcgccgcaccatggagctgtactcgcatacc
acgcgcttcgctctggccgccaacaactccgagaagattatagagcccatacagtcgcgc
tgcgcggtactgcggtactcgcgcctcactgacgcgcagatactcgcaaaggtcttggag
gtgtgcgaaaaggagcagctgtcgtacacggaggaggggctgaacgcggtggtgttcact
gcgcagggcgacctgcgcgccgcgctcaacaacctgcaggccacggcgcaaggcttcgcg
cacgtcagcgccgaccacgtgttcaaggtgtgcgacgagccacaccccatgctggtgcgg
ggcatgctggccgcctgcgcgcgccgcgacatccacgaggcctacaaggtcatcgccaag
ctgtgcaagctgggctacgcggccgaggacatcgtcagcaacgtgttccgcgtttgcaag
acgctggacgtggacgaggccacgcggctggcgttcgcgcgagaggtggggctgacgcag
ctgcgcgtggcggacggcctgagctcgccgctgcagctggcgggtctgctggcgcgctgc
tgccgcgccgccgccccgccgccccgtagcggcttctga
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integrated database retrieval system