Trichoplusia ni (cabbage looper): 113500358
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Entry
113500358 CDS
T05757
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113500358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113500358
03036 Chromosome and associated proteins [BR:
tnl03036
]
113500358
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113500358
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113500358
PBAF complex
113500358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
DUF6376
Ogg-HhH
Motif
Other DBs
NCBI-GeneID:
113500358
NCBI-ProteinID:
XP_026736923
UniProt:
A0A7E5W8B8
LinkDB
All DBs
Position
13:complement(7044173..7054638)
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AA seq
590 aa
AA seq
DB search
MATPNSYKQNTSMSMPSPQSNPHYMIAGPPMSFGMMKGGMNAPPPHHNQYQYHHPPYQGG
PSVGHPGGYGGWAHTPQQQRFGAEGARRAAGAAVAGSPGQAAKDDKTSPFVSTVHSHPGF
QPQKIGKGAGAGAGLPKPPKPPEKPLMPYMRYSRRVWDTVKAAHPDLKLWEIGRIIGGMW
RDLPETEKAGYVDEYEAEKLEYEKSLKTYHNSPAYLAYIAAKNKAVVGNLEEESSSKKGS
SQKEQQQQDRRIDIQPAEDEEDQDEGLSVKHVAYARYLRNHRLINEIFSDTVVPDVRSVV
TTARMQILKKQVQSLTMHQKKLEDELQQIEEKFEAKKRKFIESSEAFQEELKKHCKPAVD
DDTFSRMVERAMEQMRRGVAPANTQPLPPAAHDKKDEPMEQDQTQIKPETNGPNLPTQVD
KVSTTEVKTDGVTTELKTEPEAKEKEPEEPVNNGHDAEVERKEEKPVPKVENKEAAAPAA
PPAAHPTHITSPPHHPLLMPPAAGAAALPGPPHGAPPPPPAGAYGGAYGGRYYGGYAGGF
PGGAGYGAHVPYYGGAQPEHYHAAHHLHHHAPQHHASDKQEEPQPKKESE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccaaacagttacaaacaaaacacatcgatgtcgatgccaagccctcagagc
aatccgcactacatgattgcggggccccccatgagtttcggtatgatgaaaggcggtatg
aatgcaccgccgccgcaccataaccaataccagtaccaccacccgccataccaaggtggt
ccctcggtgggccacccgggcgggtacggcggctgggcgcacactccccagcaacagcgt
ttcggtgcagagggcgcgcgccgcgccgccggggccgcggtggccggctcgcccggacag
gccgctaaggacgataagaccagtccctttgtctccacggtacattcccatcctggattt
cagccgcagaagatcggcaagggcgccggcgcgggcgcgggcttgccaaagccgccgaaa
ccgccagaaaagccccttatgccgtacatgaggtactcccgccgggtttgggacaccgtc
aaggccgcccaccctgacctaaaactatgggagataggcaggatcataggaggcatgtgg
agagacctgccagagacagaaaaggctggatatgttgatgagtatgaagctgaaaagttg
gagtatgaaaagagtttgaagacctaccacaactcgcccgcttatctagcctatatagcg
gcgaaaaataaagctgtagtaggtaatctggaagaagagagctcaagtaagaagggtagc
tcccagaaggaacaacagcagcaggacagaagaattgatatacagcccgctgaggatgaa
gaagaccaagacgagggtctatcagtgaagcacgtggcgtacgcgcggtaccttcgcaac
caccgcttgatcaacgagatattctctgacaccgtggtcccggacgtccggtctgtcgtc
actacggctaggatgcagatcttaaagaagcaagtgcagtcgttgactatgcatcaaaag
aagttagaggacgaactacagcagatcgaagagaagttcgaagctaagaagcgcaagttc
attgagagcagcgaggctttccaggaagaacttaaaaagcactgcaagccggcggtggac
gacgacacgttctcgcgcatggtggagcgcgccatggagcagatgcggcgcggcgtggcg
cccgccaacacgcagccgctgccgcccgccgcgcacgacaagaaggacgagccgatggaa
caagatcaaactcaaataaagccagagaccaatggtcccaacctgccgacacaagttgac
aaggtctccaccactgaagtgaagactgacggggtcactacggagctgaagacagagcca
gaagccaaggaaaaggagccagaagaacccgtcaacaacgggcatgatgctgaagtagag
aggaaagaagaaaaaccagttccgaaggtggagaataaagaagctgcagcccccgccgcg
ccccccgcagctcaccccacacatatcacatcacctccacaccatccgctcctgatgccg
ccggcagctggcgcggccgcactgcccggcccgccacacggggccccgccgccaccgcct
gcgggcgcgtacggcggcgcgtacggcgggcgctactacggcggctacgcgggcgggttc
ccgggcggcgcgggctacggcgcgcacgtgccctactacggcggcgcgcagcccgagcac
taccacgccgcgcaccatctgcaccatcacgcgccgcaacaccacgccagcgacaagcag
gaggagccacaaccgaagaaagagagtgaatga
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