Trichoplusia ni (cabbage looper): 113500999
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Entry
113500999 CDS
T05757
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113500999
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113500999
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113500999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
NPR3
Motif
Other DBs
NCBI-GeneID:
113500999
NCBI-ProteinID:
XP_026737765
UniProt:
A0A7E5WAT2
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All DBs
Position
15:complement(4997697..5004016)
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AA seq
977 aa
AA seq
DB search
MGRGRDRSRDRRRSRSRSRSRSRSRSPRYGLGSGGGGGGGGGYGGGGRRSNPGASLRKPK
WDLSRLKPFKKDFYVPHPDVENRSESEVEAWRSDNEITLKGRNIPKPTMTFDEAGFPDYV
MDEIDKMGFSKPTPIQAQGWPIALSGHDMVGIASTGSGKTLSYILPAIVHINNQPKSSRG
DGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATP
GRLLDFLESGRTNLKRTTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPRE
VQSLAAEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTI
IFIETKRRVDDITRKMKRDGWPAVCIHGDKSQNERDWVLQDFRSGKAPILVATDVAARGL
DVDDVKFVINFDYPSNSEDYVHRIGRTGRTNKTGTAYTFFTPSNAAKAADLVAVLKEAKQ
VVNPKLQELSERGGGGGRPGHRGRGGRYRRGRRSRSRSRSRRRRSRTRSRSRDRRRRRHS
SSRSSRSRSSRSSRSHSRSRSRSRSRSRSGKCSPLKTTTDSGQQQAPQALLPTPKPLLPT
PIGPQLPANAAKGPATPPTENNMNMTQTDRNVMLNNPPNGNANYLHPPNQIPPLMALNPQ
MTMCGPPPMNGPGFPMPPFFPTDQYGLMMPNFPTAMLPPGNWAAPPPPPPPPPPSESSAN
GSLEQRGPGQSGHESDSRKRGARSGGLGGSSYTPAAGGLGSGSGGLGAGGGLGSASAGLS
NSSAHAAGGGLGSGGGLGSSGGLGSSGGLGSDGPSGSRSRGRDRRRRGRGRDHDDFDSEN
PGSGGLGSAGLGAPDGGGLGQQPGSGYNSGGLGVPHGSLLPRMLPPQNGVDGVGPQGANF
TAFGSYGSKNIKQNSIIQGNESSESYNDGSSRMEFYGPQNMGPGRPYGLGMDQPGFNGAQ
ANGSVGYNNDRQRNRRR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaagagatcgtagtcgtgataggcgtcgcagtcgtagtaggagcaggagt
aggagtcgcagtcgcagccctcgatatggtcttggatctggaggaggtggtggcggcgga
ggcggttatggtggcggtggccggcgaagtaatcccggggccagcttgcgtaaacccaag
tgggacctgagtagactgaaaccgttcaagaaagacttttatgtacctcatccagatgtg
gagaatagatctgaatctgaagtagaggcttggaggagcgacaatgaaattacactgaaa
gggcgaaacatacccaagccaactatgacttttgacgaagcaggttttcctgattatgtt
atggatgagattgataaaatgggtttttccaaaccaacacccatacaagctcaaggttgg
cctattgcattgagtgggcatgatatggtggggattgcatccacaggctcaggaaaaacc
ttgtcttatattttgcctgcaattgtacacattaacaatcagccaaagtctagcagaggt
gatggccctattgctctagtattggcacctactagagaattagcacaacaaatccaagaa
gtctgtgataagtttgcaaacacatctaaaatacacaatacgtgtttgtttggtggggcg
cccaaaggccctcaagctagagacttggatgctggggttgaaattgttattgcaacacca
ggtcgccttttagattttctggaaagtggaagaacaaacttaaaaagaaccacatattta
gtattagatgaagctgacaggatgttggatatgggtttcgaacctcaaatcagaaagatt
attgaacaaattcgtcccgatcgtcaaacacttatgtggtctgcaacatggccgagggaa
gttcaaagcttagcagcagaattcttaaaggattacctacaaatcaatgttggctcgtta
caactggctgccaaccacaatatcttgcaaataattgatgtctgcatggagtatgaaaaa
gaaactaaactgagcacacttcttaaagaaatcatggctgagaaggaaaataaaacaatc
atttttattgaaactaaacgtagagttgatgatataacaagaaaaatgaaaagagatgga
tggcctgctgtatgtattcatggagataagtcacaaaatgaacgtgactgggtcttgcaa
gattttcgaagtggaaaagctcctattcttgttgctacggatgttgctgccagaggttta
gatgtggatgatgtcaaattcgtaattaatttcgactacccaagcaattcagaagattac
gtccatagaattggaagaactggacgaacgaataaaactgggacagcatatacgtttttt
acaccgtcaaatgcagcaaaggcggcagatcttgttgccgtgttgaaagaagctaaacaa
gttgtcaatccaaaattacaagagttatctgaacgaggtggaggtggcggaagaccaggg
caccgaggccgcggtggaagatatcgtcgtggacggcgttctcgctccaggtcgcggtct
cgccgccgccgctcccgcacacgctcgcgttcgcgtgatcgtcgccgcaggcgccacagc
tcgtctagatcttcgcgaagccggtcgtcgaggtcgtcaagaagccactcgcgctcccgt
tcccgttctcgcagccgatctcgctcaggcaagtgcagccccctgaagactactacggat
tcgggccaacaacaggcgccccaagctcttcttcccacgccaaaaccccttttgccaact
cccattggtccccagcttcctgccaacgccgctaaaggtcctgccacaccccctactgaa
aataatatgaatatgacgcaaactgatagaaatgtcatgctcaataatcctccaaatggt
aatgcaaattacctacatccacctaatcaaataccgcctttgatggctctaaatcctcaa
atgactatgtgtggtcctcccccaatgaacggaccaggttttcccatgccgccttttttt
cctaccgatcagtacggtcttatgatgccaaatttccccacggcgatgttaccaccagga
aactgggcagcgccgccccctcccccgcctcctcctccgccatccgagtcctctgctaat
gggagtctcgagcaaaggggccctggacaaagtggccacgagtcagattccagaaaacgc
ggggctcgctcaggcgggctcggtggctcgagctatacgcctgctgcgggcgggctcggc
tccggcagcggcgggctaggggcaggcggcgggctcggctccgcttccgctgggctcagc
aacagctctgctcatgccgccggcggcgggctcgggtccggcggcgggcttggctcgtcc
ggcggactcggttcttcaggaggtctcggctcggatggtccttctggatcgcggtcacga
ggccgtgacaggcggcgccgcggcagaggacgcgatcacgacgactttgactcggaaaat
ccgggctcaggaggtctcggctcggcaggactcggtgcccccgacgggggcggcctgggc
cagcagcccggctccggctacaactctggcggtctcggcgtacctcacgggagcctgttg
ccgcgcatgctccctccacagaatggtgtcgatggcgttggacctcagggtgctaatttc
actgcgtttgggtcctacggatctaaaaatattaaacagaatagcattattcaaggaaat
gaaagtagtgagagttacaatgatggcagtagtcgaatggagttttatggtccacaaaat
atgggtcccggccgaccttacggtctgggtatggaccagccaggtttcaacggtgcgcag
gcaaatggctccgtggggtacaataatgaccgccagagaaatcgccggcgatga
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