KEGG   Trichoplusia ni (cabbage looper): 113501011
Entry
113501011         CDS       T05757                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tnl  Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tnl04812]
    113501011
Cytoskeleton proteins [BR:tnl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     113501011
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR3_2nd Katanin_con80 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_SCAP eIF2A Beta-prop_IP5PC_F Beta-prop_VPS8 PEP5_VPS11_N Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_ACSF4 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd PROPPIN Tricorn_2nd CoV_NSP15_C
Other DBs
NCBI-GeneID: 113501011
NCBI-ProteinID: XP_026737782
UniProt: A0A7E5WBI4
LinkDB
Position
15:complement(7590885..7596521)
AA seq 797 aa
MESIRRSWKLQEFVAHKANVNCLAMGHKSNQVLATGGDDKKVNLWAIGRQSCLMSLSGHT
TPVECVCFGHSEDLVCAGSQTGALKIWDLEAAKLLRTFTGHKGAIKCMDFHPYGDYLTTG
SCDSNVKLWDTRKRGCIVTYSSHRLAVNSLQFSPDGQWIASACEDGLVKVWDVRVGKVLQ
EFVEHTSAVTCVKFHPHEFLLASCGTDRTVNFWDMEKFQLVSKFEKDNTSIRHMVFSDDG
ATLLGCANDGLHVIGWEPARVFDTVHGHWGQIHDITVAQTQLIAGSFHSTYVVLSVVDLN
KVHPFGGPPPLSPPVVRDLSPFQKGHSVRKSFSKEKPPKEVMHRPTLLDEKTAEESTSGT
EADEDSGAVISNFNDYTEIFRPSRALTRTPPPATSLSSEDYSIPGEIPQEPMEKSEPTVS
TALRDLMLDEPVPLTRPLPQPSPPQRQRSEHYSRIPTSTKEHYNVEQKKVENFQPRVMDN
TKENNTFATSHSLRDYAASPLTANSLNRHNSYKETKSTTDLSSTNLRPSNSEISLGPPTL
GPRSLSFTRTATEATRRRVVETVVRESVAVSRSVEAPEAEPEPEFVPYTTDRPVGLDLDE
FLPRGLAGLGVRRGARGAGAEPSEQEVLGVMMRGHDSMMAVLTARQRALQIFHSVRINKS
LRSALESVIALEDTSVILDILNVMAHKPSLWNLDICLLMLPKIYELLQSKYESYMQCGCN
ALRLIVRNFSSVVRANVSAPVRTLGVDIPREERYAKCMQIHRLLLDVRAFLLKRQTLQGR
LGAAFRDLHNLMQQGLD
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggagagtattcgacgatcatggaaactgcaggagtttgtggctcacaaagcgaatgtc
aattgcctagccatgggtcacaagtcgaaccaggtgttggcgactggtggcgatgataaa
aaagtcaatttatgggccattggaagacaaagttgcttgatgagtttgagtgggcacaca
actcctgttgaatgtgtatgttttggccattctgaagacctagtttgtgcaggatcacaa
accggtgccttaaagatatgggacttagaagcagctaaattattaagaacattcacagga
cacaaaggggctatcaaatgtatggactttcatccatatggtgactacttgactactggc
tcttgtgacagcaatgttaagttatgggacactaggaaacgaggatgtattgtaacttac
tcaagccaccgccttgccgtcaatagtctgcagtttagccctgatggacaatggattgct
tctgcttgtgaagatggtttagttaaggtgtgggatgttcgagttggcaaagtacttcaa
gagtttgtggaacacacttcagcagtaacctgtgtgaagttccaccctcatgagtttcta
cttgccagctgtggcactgacagaactgttaacttctgggacatggaaaagttccaattg
gtatctaagtttgaaaaagacaacacatccatcagacacatggtgttcagtgatgatggt
gcaacattgcttggttgtgcaaatgatggcttgcatgtcattggctgggagcctgccaga
gtgtttgacactgttcatggacattggggacaaattcatgatataactgtagcacaaaca
caattaatagctggttcattccattcaacttatgtggtgttatcagtggttgatctcaat
aaagttcatccatttggaggtccacctccattatccccaccagttgtcagggatctctca
cctttccaaaaggggcattcagtacgcaaaagcttctcaaaggaaaaaccacccaaggaa
gttatgcatagaccaactctacttgacgaaaaaacagctgaagaatctacatcagggaca
gaagcagatgaggattcaggtgctgttatatcaaattttaatgactacactgagatattc
cgcccttctagagcattgacacgtacgcctccaccagctactagtttatcttcggaagac
tactcgataccgggtgagataccccaagagcctatggagaagtccgagccgacggtgagc
accgccctccgggacctgatgctggacgagccggtgcccttgacgcggcctctcccgcag
ccctcgccgccgcagcgccagcgatcagaacactactcgcggatccctacatccaccaaa
gaacattacaatgttgaacagaagaaagttgaaaatttccagccgcgggtgatggacaac
actaaagaaaataatacgttcgcgacatcgcattcattaagagattatgccgccagcccg
ctcacagcaaattcgcttaatcgacataattcctacaaagaaaccaaatctaccacagac
ttatcatccacgaacctccggccaagcaatagtgaaatatctttaggtcctccaacatta
gggcctaggtcattgtccttcaccagaactgctacagaggctacgagaagacgagtagta
gagacagttgtaagagaaagtgtcgcagtatctcgcagtgtagaggcccctgaagctgaa
ccagagccggagttcgtaccgtatacgaccgatagacctgttggactcgaccttgacgaa
ttcttgccacggggtctggcggggctgggcgtgcggcgcggggcgcgcggcgcgggcgcg
gagcccagcgagcaggaggtgctgggcgtcatgatgcgcggacacgactccatgatggcc
gtgctcaccgcccgccagcgcgcgctgcagatatttcattccgtccgaattaataaaagt
ctgagatctgctttagagtctgttatcgcattagaagatacttctgtcatactcgacatt
ctaaatgttatggcacacaaaccatctttgtggaatttggacatttgcttattaatgttg
cctaagatatatgaattacttcagagcaaatatgaatcatatatgcaatgtggttgcaat
gccttgagactgatagttcgcaacttttcatctgtggtgagggctaacgtaagtgctcca
gtgcgcacattaggtgttgacataccgcgcgaggagcgctacgctaagtgcatgcagata
catcgactgctacttgacgtccgagccttcctgctcaaacggcaaacactccagggacgt
ctcggagctgcgtttagagatcttcataacctcatgcaacagggcctcgactga

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