Trichoplusia ni (cabbage looper): 113501043
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Entry
113501043 CDS
T05757
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tnl01009
]
113501043
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113501043
Enzymes [BR:
tnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113501043
Protein phosphatases and associated proteins [BR:
tnl01009
]
HAD phosphatases
Fcp/Scp phosphatases
113501043
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113501043
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
SpdA
HVO_A0563_N
DUF2249
Motif
Other DBs
NCBI-GeneID:
113501043
NCBI-ProteinID:
XP_026737821
UniProt:
A0A7E5WCD4
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All DBs
Position
15:3616380..3638693
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AA seq
298 aa
AA seq
DB search
MDASSIITQVSRDDEQLNNYGSDRGSSPGGQHNEGDGTPVSGSAPLGSKKSSGSGGFLRS
LLCCWRGGRGKGPPGSNGANSIDGRASPLPQERGLLVMAEHAPRPLLPPVRHQDMHKKCM
VIDLDETLVHSSFKPINNADFVVPVEIDGAVHQVYVLKRPHVDEFLRRCGELYECVLFTA
SLAKYADPVADLLDRWGVFRARLFRDSCVFHRGNYVKDLNSLGRDLRRVVIVDNSPASYI
FHPDNAVPVASWFDDMTDSELLDLIPFFEKLSKVESVYTVLRNSNHPYNAAAPPSPPT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgtccattataactcaggtgtcacgggatgacgagcaattaaacaattat
ggatccgacagagggtcatcccctggcggccagcataatgagggggatggtacgccggtg
tcagggtctgccccattgggcagcaaaaagtccagtgggagcggtgggttcctgcggtcg
ttgctgtgctgttggcgcggcggacgaggcaaaggcccgcccggcagcaatggcgcgaac
agcatcgatggccgagcctcgccgctccctcaggagcgggggctcctggtcatggcggag
cacgccccacgacccctgttgccgccagtgagacaccaggacatgcataaaaagtgtatg
gtcattgatcttgatgagacgttagttcacagctcttttaagccgataaacaacgcggac
ttcgtagtgccggtcgagatagacggcgcggtccaccaggtgtacgtgctgaagcggccg
cacgtcgacgagttcctccggcgctgcggcgagctgtacgagtgtgtgctgttcactgcg
tcgctcgctaaatacgctgatcccgtcgctgatctattggacagatggggcgtcttccgc
gcgcggttgttccgcgacagctgcgtgttccaccgcggcaactacgtgaaggacctgaac
agcctcggtcgcgacctccggcgtgtcgtcatcgtcgacaactcgcccgcctcctacata
ttccatcctgataatgctgtacctgtggcgtcatggttcgacgacatgacggactcggag
ctgctggacctgatcccgttcttcgagaagctcagcaaggtggagagcgtgtacacggtg
ctgcgcaactccaaccacccgtacaacgcggccgcgccgccctcgccgcccacatag
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