Trichoplusia ni (cabbage looper): 113501058
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Entry
113501058 CDS
T05757
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113501058
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tnl01009
]
113501058
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113501058
03029 Mitochondrial biogenesis [BR:
tnl03029
]
113501058
Protein phosphatases and associated proteins [BR:
tnl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113501058
Membrane trafficking [BR:
tnl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113501058
Mitochondrial biogenesis [BR:
tnl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113501058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TetR_C_13
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113501058
NCBI-ProteinID:
XP_026737849
UniProt:
A0A7E5WB03
LinkDB
All DBs
Position
15:complement(5603386..5622788)
Genome browser
AA seq
1327 aa
AA seq
DB search
MLYVFHVDAGQMTTYDMSLTLQNDDFVFSVSSLKLAIERKSKVPANSLVLLVSGGEVLQS
DHMVSSYSAGTDTNPIYMFSKPSVKDSHLKQSMCDLSPIVELSTGEFSSEFRSAFDGKSV
AELKAAVEKCCSLQPNVYTVTSCASLAQQFSDLAFEVSSSCDQLVHEQHLQHQGWAAVVA
NLEDIFNEFCERSRNFKESFRKHRLKKEEYHEKLSGLNEVLESLGKIPILPPLQLNAEAH
RFSAFDVFEDTDFEGPHYRITHPLDNSSENKPCQDFGVEAFKLSDEDVFEHKDASSGNEG
ATSSEPIPHIEESDEGVTFKAQSYESKEEPSLLHWILAQGNKASLQDILDYCQKGLALLD
ADPLKEREAELYHILEYANMHGLKHIKGIEERLYGLDQLLNDVKKLERDQRDQAASLIQC
RERLNTTCDPSVLPTLVQSHWCQLKKLLKGHQMLIDIRRRIAKSKDELSHILKARLEAVL
MIENSMSVQDAHAMLSFQCFNRLSRYFSIVSQLHRAPGVFVSAVHEVARRRSFSQAHLKW
ATDLAEKLLKIHDEEVHRRQEFNNVFEGHFLRSLFPGMTELPPTFATQAPPTFDANLPKL
TEADVEYIANAFPDLAKDVPSYDMDATVQFFQQRIRASEHECKDADIQVDMDKDFESVTG
GDFEKLGGQSSTQKQKVDISIICVPETMAVSTVTEDNMDTHKINIEKLQEFLVKVYGLCK
VNIVFIIEELANLKNEVNEQKKFITSKYLEILEAWEKSNAECAIRFREETQRLTVDHELE
LSDMKAALNEKDEVISNLKTEMENLKTEHQKKIEQLEKEHQDTKDLLEKTREEIKGFESK
LEDIEAQKQKEIRDLQEKMHMDYKAEIESLRSRFRLVALTNMDRSPSESSLEKIERTDVI
EISSHNAIVMQTKENAEVEKEEAVREALAKAEAEWKAKLEAEVAAASAKQESDKQLTTSM
SMNDVTRRLLSEKERQIDALRERELALLRECGKYRDTIQQLTDPDTNDYDQLLKTQLATL
ENENEVLKQQVKDLKKDLEKKTEEEKSDSDGRSSPKKEEGRRSRGRCHTPCGLSAGTLSL
SSCLPGHTVMLLWDPAHLNYTVLQEASIMYFVHSDCLAALDLSIQVKNESERKLYAVATV
ESKEYCYAKKSGNRYGMPRGSRFYRVRVRPPRAPAPAPPPCCDTRHRPDALKSGMLPVFG
PTRPLKKWLTYMHAPDSQKSVDTSQSTSSTTEESARAGEVATATLINLESPGSAPPPQDE
DQLDSIEAGDQWQNSRMQLSTISAVTDMECSVGRCAGAEPLELAGSAAAGPARGDPAGPE
LAEEAAP
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatgtgtttcacgtggatgctggtcaaatgaccacatatgatatgagtctcact
ctacagaatgatgattttgtttttagtgtgtcctcactaaaactagcaatagagaggaag
tctaaagtgccagcaaactccttggtgctcctcgtgagcgggggtgaagttctgcagtct
gatcatatggtttcctcatacagtgctggtaccgacacaaaccctatatacatgttcagc
aaaccttctgtgaaggacagccatttgaaacagtccatgtgtgatctaagtccgatagtg
gagttgagcaccggtgagttttcaagtgagttccgaagtgctttcgatgggaagtcggtg
gctgagctgaaggctgcggtggagaagtgttgttctctgcagcctaacgtttacactgtg
acgtcatgcgcgtcactcgcccagcagttcagtgacctcgcattcgaagtgtccagcagt
tgtgatcagctggtgcatgagcagcatttgcaacaccaaggctgggcagcggtggtcgct
aacttggaggacatattcaacgaattctgtgagagatcgcggaattttaaagaatccttt
aggaaacatcgactaaaaaaggaagagtatcatgaaaagttgtctgggctcaacgaagtt
ttagaatctttaggcaagataccaatattgccgccgttgcagctgaatgctgaggcccac
aggttctcggcttttgacgtttttgaggacacggacttcgaaggcccacactacaggatc
acgcatccgctagacaacagctcagaaaacaaaccctgccaggattttggcgtcgaggca
ttcaaactgtccgacgaagatgtttttgagcacaaagatgcgtcttcaggtaacgaaggt
gccacatcttcggagcccatccctcatatcgaagagtctgatgagggggtcacttttaag
gcacagtcttacgagagcaaggaggaaccgtccctactacactggatattggctcaaggg
aacaaagcgtcgcttcaagatattttggactattgccaaaagggattagcattattagac
gcagatcctctcaaagagcgtgaggcagagctgtaccacatcctagagtacgctaacatg
catggcttgaagcatataaagggtattgaggagcggctgtacgggcttgatcagttactg
aacgatgtgaagaaattagagagagatcaacgcgaccaggcagcatcgttaattcagtgt
cgtgaacgtctgaacacgacatgcgacccgtccgtcctgcccacgctggtgcagtcgcac
tggtgtcagctcaaaaagttgttgaaaggtcatcagatgctcatcgacataaggagacgt
atcgccaagtctaaggatgaactctcacatatattgaaggcgagattagaagcggtcctg
atgatcgagaactcgatgtcggtgcaggacgcgcacgccatgctgtcgttccagtgcttc
aaccgcctgtcgcgctacttcagcatcgtgtcgcagctgcaccgcgcgcccggcgtgttc
gtcagcgcggtccacgaggtcgccaggaggaggagcttctcacaggcacatcttaagtgg
gcgacagatctcgcggaaaagctactaaaaatccacgacgaggaggtccacagaagacaa
gagttcaacaacgtgttcgagggccacttcctccgcagcctgttcccgggcatgacggag
ctccctcccaccttcgctacacaggcgccccctacattcgacgccaacctcccgaaacta
accgaggctgatgtcgagtacatagcgaacgctttccctgatttggcgaaagacgtaccg
agttatgatatggatgccactgtacagtttttccagcaaagaatacgagcatcagaacac
gaatgtaaagatgcagatattcaagttgatatggataaagacttcgagtcagtaaccggc
ggtgacttcgaaaagctcggcggacagagttccacacaaaaacagaaagtcgacatctca
ataatatgtgttcctgaaacgatggcagtgtcgacggtaaccgaggacaatatggacaca
cacaaaataaatatagaaaaacttcaagagtttttagtgaaagtttacggtttatgtaaa
gtgaatattgttttcataatagaagagttggcgaatttaaagaatgaagtaaatgaacag
aagaaatttataacgagtaaatatttagagatattagaagcttgggagaagagcaatgct
gaatgtgcaataaggtttcgtgaggagacacagaggctgacagtagaccatgaactagaa
cttagtgatatgaaggcagcgttaaacgagaaagacgaagtgatatcaaaccttaaaact
gaaatggagaacttgaaaaccgaacatcagaaaaaaattgaacagttagaaaaggaacat
caggatacaaaagacttgcttgaaaagactcgcgaggaaatcaaagggtttgagagtaag
cttgaagatattgaggcgcagaagcagaaagagatcagagacttgcaagagaagatgcat
atggattacaaggctgaaatcgagtctttacgatccaggttccgcctcgtagcacttaca
aatatggaccgttcgccgtccgagtctagccttgagaagatcgaacgcactgacgtcatc
gagatatccagtcataatgctatagttatgcagacgaaggagaatgctgaagtcgagaag
gaggaggccgtgagggaggcgctggcgaaggccgaagctgagtggaaggccaagcttgag
gccgaggtcgccgccgccagcgctaagcaagaatctgataaacagttaacaacatcgatg
tctatgaacgacgtgactcgccgcctgctgtcggagaaggagcgtcagatcgacgcgctg
cgggagcgcgagctggcgctactgcgggagtgcggcaagtaccgcgacactatacaacag
ctgaccgaccccgacaccaacgactacgatcagctgcttaagactcagttggccactctt
gaaaatgagaatgaagttctgaaacagcaagtcaaggacttgaagaaagatttagagaag
aaaaccgaggaagagaaaagcgatagtgatggcaggtcgtcaccaaagaaggaggagggt
cgtcgctctcgcggtcgctgccacacgccgtgcgggctgtccgcgggcacgctgtcgctg
tcgtcgtgtctgcccggacacaccgtcatgctgctgtgggaccccgcgcatcttaactac
actgtgttgcaggaagcatcgataatgtatttcgtgcacagcgactgtctggcggcttta
gatctcagcatacaagttaagaacgaaagtgagagaaaactgtacgcagtcgccacagtc
gagtccaaggagtattgctatgccaagaagagcggcaaccgctacggcatgccccgcggg
tcccgcttctaccgcgtgcgagtgcggcccccgcgcgcgcccgcgcccgcgccgccgccc
tgctgcgacaccaggcatcgacctgatgctctgaagagcggcatgctgccggtgttcgga
ccgactcgaccgctcaagaaatggttgacctacatgcatgctccagactcgcagaagtct
gtggacacgagccagtccaccagctccacgacggaggagagcgcgcgcgcgggggaggtg
gccaccgccacgctcatcaacctggagtcccccggcagcgcgccccccccgcaggacgag
gaccagctcgacagcatcgaggccggggaccagtggcagaactcccgcatgcaactctcc
accatcagtgccgtcacggacatggagtgcagcgtgggtcgctgcgcgggcgcggagccg
ctggagctggcggggagcgcggcggccgggccggcgcgcggcgaccccgccggccccgag
ctggccgaggaggccgcgccctga
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