Trichoplusia ni (cabbage looper): 113501109
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Entry
113501109 CDS
T05757
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113501109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113501109
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113501109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_IPO9_c
TOR1L1_N
Peptidase_C62
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113501109
NCBI-ProteinID:
XP_026737929
UniProt:
A0A7E5WB88
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All DBs
Position
15:complement(3322314..3329410)
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AA seq
2097 aa
AA seq
DB search
MAATSLAEQLKKLAVPQTTIYNDEKKTASLLFDPKEAANKDRDTFYEIGLSGLKELVALY
EGFRVFEDSLYSLASKDFERAVQTKEVNQNLDQTIEKFLLQLSPYLLLQSSHKALEWLIN
RYHIQLYNQDAIMTLILPYHGTKIFVRFIQLMNVKSTNPKWGWLQPIRKHGIVLAHQVLF
NQCVSNTGTLQFIAKSTLKYVKEFGERATQLNTVFAFFCQTAIGVIDSSKKVTEAIISAL
LPTVVKAIDSPAADFRASAYLVLGYLFAKTKLKEDTLNEIVFKLLTTEFDISFDVAILIT
MMYEKQGHVRKMSENILNDMSVDIMTNLCSHLKTLVQRGHNVRAFLMAFLKSVLPLIQGE
DFWRYCKLPEILIGEVDLKQQKPDKIIKCVLDSYHFVNANAVGDDDESDIEIIDEDDDSS
SKILNWYGAFLKNLERQYPEDFDKVVNEEMSSNSKNSAKRKGQLSKLLGFKPAIAHKVGG
TYLFENLNHVNPKLRAEAVNYISKEFSALKNENADFVKESIINRFNDDNPEVVNAALDIP
VDYLQEIFDEVDATSTFVSIIGKSTKKWKQVAKTAITMFCAVEMLPVNQETVLALIPYLF
PHNEESAKLTWQILNSHWGKKLGLLTKTKELKGTKHNHEKLCEVIFKALFINRTINLDEM
LDELQLDKSKTLDICFYMLLKISFLKNASVEEASAILNLLLESVENRSIVHSSEGQVFSS
EIMPEFIKQSRQNNMLFQVIEYIFSRVIEDMNIQEIQKPWCDVCKTPDIILVRRLYEICV
IGCAIPSYGEHYVALLQKLLDKFFKGAREKFEFVANFACGHILYATDPKVVIGPELQLRS
LKLLSNFLAVQENQNWLFDSDVLVLTVLYCLNNPITAIRECAIDIVQKILREDPDKKLIY
VQLLQEFMTHKDELLLDHNQIKHVLNTILSQKDNKKLFSRNCLLKLVGILNSDTPSHIKS
SFLQLLCEVNNPTAFPHFVQSLKSLEKTLKENELNLKLTLDIYESNLFRSVYGHINASTV
STFAKEQVWSSIELGMKEYRECILEEDQSLVSPSVLIMRQIDENVFEKVPEERANGLVYL
IASAGAVSNNPTISSVASKIMKKIHLKFSHFKPILEKMLNAVDPAASVPKKKKSTVSMLS
YQLTETDDWRLGVAFLEYVQSKKKMKLDNSFVSLLFQILNKCLRFEEQSYVEYTKQLILS
SLWYFCKKFVDEKDDEQIKSLKSVFDVELVVQCIRGTQNPQTHHHALIVLSHAAFMLPEQ
VLHHTMEIFTFMGSSVLRHDDAYSFQIITKIIETLIPILVKLDKSADEYSDKELQQLQSR
VVPVLRIFADVVLHVPEHRRLPLFTKLIETLGPSQFLWVFLALLLETHVAHFSDNKKKTP
QNSRTLADQEAPINRLDFGQSILLEFPPEVALENFIKLVVYIKSLPLQKDENSMDTDVDP
GDIFSVNGHTPIQLRHYKYVIITFMNTCLASSRFIQHTTLATDMKAMENHYKTFIISILT
FIQTISKVSDDKTAKYWRVMLHHSYDLLDHTNNLLSAPMFLSVVRGLMKHTLQTVRRKSM
ELLNSKIQFSPEIFEGVDKELLFSLLPPLLDIVKTIETKEENLSEIVAQELELNQQTSLL
SLKLLTKMLASENPEPFKDVLETVTDYTCNPNISGNVMASVVLCLAELCSNLKAHALASL
RKFMPALIKVLKKQRKAETPELVLLSTVTAIAKIVESLPLFLSPYLQKVLYEYSILLAKW
QSQDQECSKVSAIVAKLLTIKKKIAGSIPPRVLIPVINETHKILLEKENYDAVGPVMSVL
ADSFANVTTADFTALQQDLTTFFLSALQLRSDAVEKDVSADVIDRAEDEVVNALVCLVLK
LSETSFRPFYFKIYDWAIRTNVEGQKDRTITFYRLSCAIADKLKGLFVLFAGHFIKNASD
LLDSCNNSKTEDQYFDSEDKCLMLVKFIVKTLHTVFLYDSQSFLNKDRFETLMQPVVDQL
ENTLGGIEDLKVRAKEYLIPCISQFAVATADDSLWKLLNYQILLKTRHNDAEIRLVALDC
LVAMATQLGSSWLPLLAESVPFLAELLEDGDSKIETSTKDAIRKLEQILGEPLEKYF
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacatctttagctgaacagcttaaaaagctagctgtgccgcagacaactatc
tataatgatgagaagaagaccgcttcattactttttgacccgaaagaagccgcgaataaa
gaccgcgatacattctacgagattggtttgagcggactgaaagaattggtagccttgtat
gaaggttttcgggttttcgaagattcactgtacagccttgcttccaaagactttgaaaga
gctgtacaaactaaggaggttaaccaaaaccttgatcagaccatagagaagtttttactt
cagttatcaccttacctccttttgcaatcatcgcataaggctctggaatggctgatcaac
cggtaccatatccaactatacaatcaagatgctatcatgacactgatcttgccatatcat
ggcactaaaatatttgtccgtttcattcaacttatgaatgtgaaatcaactaatcctaaa
tggggctggctccagcctatacgcaaacatggcattgtgttagcccatcaagttttgttc
aaccagtgtgtgtcaaatacaggcacacttcagtttatcgctaaaagtacattgaagtat
gtaaaagaatttggcgaaagggctacacaactgaacacagtctttgcattcttctgtcaa
acagctattggtgttattgattctagcaagaaagttactgaggcaataattagtgcttta
ctgcccactgtagtcaaagctatagactcaccagctgctgacttccgggcatcggcatat
ctcgtactgggatatttatttgcaaagacgaagcttaaagaagacacactgaacgagata
gtgttcaaactgttgaccactgaatttgacatttcgtttgacgtagcaattctgattacc
atgatgtatgagaaacaaggtcatgtgaggaagatgtctgaaaatattctgaatgacatg
tctgttgatataatgaccaatctttgtagtcacttaaagaccttggttcaaagagggcat
aatgtgagggcttttctaatggctttcttgaaaagtgtgctgccgttgattcagggtgaa
gacttttggagatactgtaagctgccagagattcttattggtgaggttgacttgaagcag
cagaaaccagataaaatcatcaagtgtgtccttgattcctaccattttgtgaatgccaat
gctgtaggtgacgatgatgagagtgacatcgaaattattgatgaagatgatgactcttct
agcaagatcctcaactggtatggtgcttttctgaagaaccttgaaaggcaatacccagaa
gattttgacaaagttgttaatgaagaaatgagttcaaatagcaagaattcagctaaaaga
aagggtcagctttccaaactccttggttttaagccagcgatcgctcataaggttggtggt
acatacctttttgaaaatttgaaccatgtcaatccaaaattgcgtgcagaagcagttaat
tacatttctaaagaattttcggctttgaaaaatgagaacgctgactttgttaaagaatct
attattaatagatttaatgatgacaaccctgaagtggttaatgctgctttggatatacct
gttgattacttacaagaaatatttgatgaagtagatgcaacatctacctttgtgtctatc
attggtaagagtacaaaaaaatggaagcaagttgctaagacagctattactatgttttgt
gcggtagaaatgttgcctgtcaatcaagaaactgttttggcattaataccataccttttc
ccacataatgaagaatcagccaaactgacttggcaaattttgaattctcattggggcaag
aagttaggacttctgacaaaaacaaaggaacttaaaggaactaaacataatcatgaaaag
ttatgcgaagttatattcaaggctctatttattaacagaactattaatttagacgaaatg
cttgatgaacttcaactggataaatctaaaacactcgatatttgcttctatatgttactt
aaaatcagtttcctcaaaaatgcttcagtcgaagaagcatcagccattttaaatctactt
cttgaatctgttgagaatagatcaattgttcacagttcagaagggcaagtattttcaagc
gaaataatgccagagttcataaaacagtcgcgtcaaaacaacatgcttttccaagtgatt
gagtatattttctctagagttattgaggatatgaatattcaggaaattcagaaaccttgg
tgtgatgtctgtaaaaccccggacataatacttgtgaggaggctctatgagatttgtgtg
atcgggtgtgctataccaagctatggtgaacattacgtagcactccttcaaaagctatta
gataaatttttcaaaggtgcaagagaaaagtttgagtttgttgcaaacttcgcttgtgga
catattttgtacgcgactgatcccaaagttgttattggtccagagctacaactccgcagt
cttaaactcctcagtaacttcttagctgtacaggaaaatcaaaactggttgtttgattca
gatgttctggtattgaccgtcttatactgcctgaacaaccctattactgcgattcgtgaa
tgcgccatcgatatagttcaaaagatattgagagaagaccctgataagaaacttatctat
gtccagctgctacaggaatttatgacacataaagacgaattgttgttagaccataatcaa
ataaaacacgtgttgaatacgatactgagccaaaaggacaacaaaaagcttttcagtcgc
aactgtcttttgaaactcgttggcatattgaattctgatactccatctcacataaaatcc
agctttttacaactcctatgtgaagttaacaaccctacagccttcccgcatttcgttcaa
tctctaaaatcgttggaaaagactttgaaggaaaatgagttgaatttaaagttaactctt
gacatttatgagtccaatctttttaggagtgtgtatggccatataaatgcatcgaccgta
tctacttttgccaaagagcaagtatggagctctatagaattaggtatgaaggaatataga
gagtgcatcctagaagaagaccaatcgcttgtgagtccctctgtgttgataatgcgacaa
attgatgaaaatgtctttgaaaaggtgccagaggagagggccaatggcttagtctacctg
attgctagtgctggagccgtaagcaacaaccctacaatatcgagcgtcgcgtcaaaaatt
atgaagaaaatccacctcaaattcagccacttcaagccaatcttggaaaagatgttgaat
gcagttgatccagctgcaagcgtgcccaagaaaaagaagtccacagtctccatgttgtcc
taccagttaactgaaacagatgattggagacttggagttgctttccttgagtacgtccag
agcaagaagaaaatgaaattagacaactcttttgtttcattgttgttccaaatattgaat
aagtgcctgagatttgaggagcaatcgtacgtagagtacactaaacaactgatcctgtcg
tctctatggtatttctgcaagaagtttgttgatgagaaggacgatgaacaaataaagtct
ctgaaatctgtgttcgatgttgagttagttgttcaatgtatcagaggtacccaaaatcct
cagacgcatcaccacgctttgattgttttatctcatgctgcgttcatgcttcctgaacaa
gttcttcaccatacgatggagatatttacatttatgggctcatcagtcttaagacacgat
gacgcatacagcttccaaattatcacaaagattattgagacgttaatcccaattctggtt
aagctggataagagtgctgatgaatactctgataaggaacttcaacagttacaaagtcgt
gttgttcctgtgttacgtatcttcgctgatgttgttttacatgtaccggagcatagaaga
cttccattattcacgaagctcatagaaactcttggccccagtcagttcctttgggtgttc
cttgctttattacttgaaactcatgtggcccacttcagtgataacaagaagaaaactccc
cagaattcgagaacattagcagatcaagaagctccaataaatagacttgattttggtcaa
agcatccttttagaattcccgcctgaagtagcactggagaatttcataaaactggttgtc
tatatcaaatctttgcctttgcaaaaggatgagaactctatggacactgatgtcgatcct
ggcgacatctttagtgtgaatggacatacccctatacagctacgtcactacaaatacgtt
ataatcacttttatgaacacttgcttagcatcgtccagatttattcagcatactactttg
gcaactgatatgaaagccatggagaaccattacaaaaccttcatcataagtatactgacg
ttcattcaaacaatttccaaagtatctgatgataaaactgcaaaatactggcgcgttatg
ttacatcacagttatgacttgctagaccatacgaacaacttgctctccgctcctatgttc
ctgtctgtggtgagaggtcttatgaaacacacactacagacagtcagacgtaaatcaatg
gaacttctgaactcaaaaatccaattcagtccagaaatattcgaaggtgtggataaggag
ctgctattctcattattgcctcctctattagatattgtcaagacgattgaaacgaaggag
gagaacttgagtgaaattgttgctcaagagttagaattgaatcagcaaacgtccctccta
tctctaaagttgctgacaaaaatgcttgcatcagagaatccagagcctttcaaggatgtt
ctagaaactgtaacagattacacttgtaatccgaatatatctggcaatgttatggcttcg
gtagtgctatgcttggctgaactttgcagcaacctcaaagcacacgcgcttgcaagtctc
cgcaaattcatgccggcactcatcaaagtcctcaaaaagcaacggaaagcagaaacgcct
gaactggtgttgctaagtacagtgacagccatagcaaagatcgttgaaagtctgcctcta
ttcttaagtccgtacttacagaaagttttgtacgagtattccattctgttggctaaatgg
cagagccaagatcaggaatgcagtaaggtctcagcaatagttgcgaagctattgacaata
aagaagaaaatcgctggatctatacctccaagggttcttatcccagttattaatgaaact
cataagatattattggagaaagagaattacgatgcagttggtccagtgatgtctgtgtta
gctgatagcttcgcgaatgtgacgactgcagacttcacagcattacaacaagaccttacg
acattcttcttaagtgctctgcaactgagaagcgatgctgtagagaaagatgtcagtgct
gacgtcatagaccgagccgaagacgaagtggtgaacgctttagtgtgcctcgtgttgaag
ctctcagagacaagctttaggccattctatttcaagatttacgactgggctataaggact
aatgtcgaaggacagaaagacaggactattactttctacagattaagttgcgccatagct
gataagttgaaagggctatttgtcctctttgctggtcacttcattaaaaacgcttcggat
ctccttgactcctgcaacaacagtaaaacagaagaccaatactttgattctgaagataaa
tgtttgatgctcgtaaagttcattgtcaaaacacttcacacagtgttcctttacgacagt
caaagcttcttgaataaagatcggtttgaaacactcatgcagcctgtggtagaccagctc
gagaataccttgggaggaattgaagaccttaaagtcagggctaaagagtacttaatccct
tgcatttctcaattcgctgtcgccactgcagatgattcgttgtggaagttactgaattat
cagattttgttgaagactcgtcataatgatgctgagataaggttggttgctcttgattgc
cttgtcgccatggcaacgcagctcggtagcagttggctgccactattagctgagagtgtg
cctttcctggctgaacttctagaagacggcgattccaagattgaaacatccactaaagac
gcgatcagaaaacttgaacagattttgggagaaccattagaaaaatacttctga
DBGET
integrated database retrieval system