Trichoplusia ni (cabbage looper): 113501114
Help
Entry
113501114 CDS
T05757
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113501114
Transcription factors [BR:
tnl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113501114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113501114
NCBI-ProteinID:
XP_026737940
UniProt:
A0A7E5WBA1
LinkDB
All DBs
Position
15:4577519..4579469
Genome browser
AA seq
365 aa
AA seq
DB search
MLTMETDLKGGSLHATVPPHHALQHGYGSLGALGGMMALPQQQPLAQHQPLQHQHHQPLP
QHHQPQPQHHQPPNNNNNNTSKNSNAERVKRPMNAFMVWSRGQRRKMASDNPKMHNSEIS
KRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLAKKQEKYPLGGGA
LLGGGEAQRSSAPAAQQPRDVYQMTPNGYMPNGYMMHDPSAYQQQAYGYPRYDVSQMQQS
GYGQYYGGGQGSPYLPQPPSPSAYGLGPGSPGGYALPPSCASHSPSGSSAKSEPVSPGPP
GMKREFAHEPPPQMKREFVSHAHAHEQLGMKREYGQQELSQIINMYHVPDEQRYAAANER
AMPLI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgatggagacggatctcaagggcggcagcctgcacgccaccgtgccgccgcac
cacgctctgcagcacggctacggctcgctgggcgcgctgggcggcatgatggcgctcccg
cagcagcagccgctggctcagcaccagccgctgcagcaccaacatcaccagccgctgccg
cagcaccaccagccccagccacaacaccatcaaccacccaacaataacaacaacaacacc
agtaaaaactccaacgccgagcgcgtcaagcgcccgatgaacgcgttcatggtgtggtcg
cgcgggcagcgcaggaagatggcatcggataacccaaaaatgcacaactcggaaatatca
aaacgtcttggtgcacagtggaaagacctctctgaatcagagaagcgaccgttcatcgac
gaagcgaagagacttcgcgcagttcacatgaaggaacacccggattacaaatatagaccg
aggaggaagacgaagacgcttgctaagaagcaagagaagtacccgcttggaggaggagcg
ctgctaggaggaggcgaagcgcagcggagctcggcccccgccgctcagcagccgcgggat
gtgtaccagatgacaccgaatggatacatgcccaacgggtacatgatgcacgaccccagt
gcctaccagcagcaggcgtacggctatccgcgctatgatgtgtcgcagatgcagcagagt
ggctacgggcaatactacggtggcggacaaggctcgccatacctgccgcagccgccgtcg
ccctcggcctacgggctggggccgggctcgccgggcggctacgcgctgcctccgtcgtgc
gcctcgcactcgcccagcggctcgtccgccaagtcggagccggtgtcgccgggcccgccg
ggcatgaagcgcgagttcgcgcacgagccgccgccgcagatgaagcgcgagttcgtgtcg
catgcgcacgcacacgagcagctgggcatgaagcgcgagtacggccagcaggagctcagc
cagatcatcaacatgtaccacgtgccggatgagcagcggtacgcggcggccaacgagcgc
gccatgccgctcatctga
DBGET
integrated database retrieval system
