Trichoplusia ni (cabbage looper): 113501116
Help
Entry
113501116 CDS
T05757
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113501116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113501116
03036 Chromosome and associated proteins [BR:
tnl03036
]
113501116
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113501116
Coactivators
SAGA/TFTC/STAGA complex
113501116
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113501116
STAGA complex
113501116
TFTC complex
113501116
SAGA complex
113501116
SLIK complex
113501116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_HPS5
eIF2A
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
113501116
NCBI-ProteinID:
XP_026737942
UniProt:
A0A7E5WY38
LinkDB
All DBs
Position
15:7500751..7504326
Genome browser
AA seq
652 aa
AA seq
DB search
MGEKNTPLLAVLQLLRKYNLKGTEDILRKEASLGDVEFENLDLPEVELASILTSHHTESD
PYSYEFAYDNLKKFIENSLDVYKYELSTLLYPVFVHMYLALILYDHNEHASNFFEKFGAE
QEDYCQEDLMRLAAVKTKDQIKGNELAEIYSTNKFVVQLSRDASSQLKRFLQEQKSSTVI
INIINNHIQVEVHDGPGRTQAQVRATAGGMLGEATRNENRTKVYYGLLKEPDIQVLPAPV
EDEEEVEETPDKPKKKKAKKEHIFMKKPKSDPNAPPNERIPLPELKETDKIEKGKALREA
SKRIQLGPDSLPSICFYTLLNSGHTAICTDICDDSTLLAVGFSNSSIKVWTLTPVKLRGM
KSAEKLQDIDREAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVMFDPFKTMLLSCSEDSTV
RLWSLQCWTCLVVFRGHVWSVWDVRWSPHGHYFVTAGHDRTARLWATDHHQPLRIFSGHL
SDVDCVQFHPNSNYVATGSSDRTVRVWDCLTGTQVRIMTGHKSTIFTLAFSVCGRWLASG
GNGELIVWDISTGSPAALIPPTHTAPIHALAFSRDGTILSSGSLDCNIILWDFNAITEEA
NGEEAGTTNNTTVQKEDKFLLRSFATKNSPIKGLHFTRRNLLLAVGSYEGSS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaaaaatactccgcttttagcggttttacagcttctacggaagtataatctt
aagggtacagaagatatattgcgaaaggaagctagcttaggcgatgttgagtttgagaac
ttggatcttcctgaagtcgagttagctagcatactcacttctcaccacactgaaagtgat
ccctacagctacgaatttgcttacgacaacctcaaaaagtttattgaaaactcattggat
gtttacaagtatgaattgtctacacttctgtatccagtgtttgttcatatgtatctggca
ttaatattatatgatcacaatgaacatgcaagtaacttctttgagaaatttggggctgaa
caagaagattattgccaggaagatctaatgcgtcttgcggctgttaagactaaggaccaa
atcaaaggcaatgaattagctgaaatatacagtaccaacaagtttgttgtccagctgtca
agagatgcatcatcgcaacttaaacgcttcttacaagaacaaaagagctcaactgttata
ataaatatcataaacaaccacatacaagttgaggtacatgatggcccaggcaggacacag
gcccaagttcgagctactgccggagggatgcttggagaagctactagaaatgagaaccgc
actaaagtttactatggattgctgaaagagcccgatatacaagttctgcctgcaccagtt
gaagatgaagaggaagtggaagagaccccagacaaacccaagaagaagaaggcaaaaaag
gaacacatattcatgaagaaacccaagtcggatcccaatgccccaccaaatgagagaata
ccattaccagagctgaaagaaacagataaaatagaaaaaggaaaagctctaagggaagct
tcaaaacgaatccaactgggcccagacagcttgccgtcaatatgtttttatacattgttg
aatagtggtcacactgccatttgcactgatatttgtgatgattctacattacttgctgtg
ggtttcagtaactccagtataaaggtgtggacactgactcctgtgaaactccggggaatg
aaatctgctgagaagctacaggatattgacagagaagctggcgacgtactcgtcaggatg
atggaagaaaaggatagagacacatgtcggactctatttggtcattctggcccagtatat
aaagttatgttcgatccattcaaaaccatgcttctctcttgttctgaggactcgactgta
cgattatggtcacttcaatgttggacgtgtttggtggtgttccgaggccacgtatggtca
gtttgggatgtgcgctggtcaccgcatggccattacttcgtgactgccggccacgaccgt
acggctcgactttgggcaactgatcaccatcagccgctcagaatattttcaggacattta
tcagacgtcgattgtgtccagtttcaccctaattcgaactacgtggctacaggttctagt
gacagaacagtacgcgtgtgggattgtttgacgggaacgcaagtccggattatgacaggc
cacaaatctacgatatttactttggcgttttcggtttgtggaagatggctagcttcggga
ggaaatggagagctcattgtatgggacatttcaacaggatctccagctgcattgataccg
ccgacacacactgcgcctatacatgcattagcattcagtcgtgatggaacaatattatca
tctggttcattggattgcaatataattttatgggatttcaatgccataacagaagaagcc
aatggtgaggaagctggaactactaataatactacagttcagaaggaagacaaatttttg
ttacgttcatttgcaacaaagaattcacccataaaagggttacattttacgcgacgtaat
ctattgcttgcagtaggttcttatgaagggagttcttaa
DBGET
integrated database retrieval system
