Trichoplusia ni (cabbage looper): 113501211 Help Entry 113501211         CDS       T05757                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism tnl  Trichoplusia ni (cabbage looper) Pathway tnl04512   ECM-receptor interaction tnl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tnl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113501211  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     113501211  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tnl04147]     113501211    00536 Glycosaminoglycan binding proteins [BR:tnl00536]     113501211 Exosome [BR:tnl04147]  Exosomal proteins   Exosomal proteins of other cancer cells    113501211 Glycosaminoglycan binding proteins [BR:tnl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113501211 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  113501211 NCBI-ProteinID:  XP_026738081 UniProt:  A0A7E5WD26 LinkDB All DBs Position 15:7529952..7556329 Genome browser AA seq 1799 aa AA seqDB search MSGPARARFLALHLVPATLLLLLRNPTPTSAVVCNQTVCDCAGIKGDVGSVGPPGVPGLQ GDYGEDGPIGRPGRPGEAGDIGDRGDLGDKGTQGIRGPYGPRGDTGPQGPYGPQGVPGLE GFDGCSGIDGIMGPPGPMGDVGERGSPGRGGEKGDQGAAGDGGVNSRGAKGDSGELGRQG VPGPPGVMGFRGDSGPQGPVGDEGLQGIRGEPGDRGKEGDDTIGPPGEKGDQGPVGEPGR PASIIVTSEVRQNITIITKGNKGQKGLKGQRGVKGLKGMIGSIGPRGTDGLPGIQGYKGD QGHDGPRGKVGHRGRDGNPGPKGDKGAPGFAGPDGADGYRGERGEDGMPGNPGLQGYAGE PGIYDDKLDVPPVPGPMGPQGPEGFVGPIGAPGYPGRRGLPGVVGPPGLPGIKGTQGRQG IPGTSTKGEPGNDGFKGFPGYRGPSGFEGPSGVVGPRGFKGSKVIGPVGEEGSPGLDGIP GQRGDRGESGDMGPSGYPGTGVHGVGPPGEEGPPGFPGQSGDPGSPGRPGFLGPKGERGD DCPYCKSGSDGPKGQRGDYGFNGQKGYPGLEGIPGARGIKGFGGIPGLKGPKGPKGNKGI AGGAGPQGSKGPKGRVIFDPPLAQIKAEVGPRGDRGFMGYPGMPGDAGWPGRAGEIGFMG IKGQMGDDGFPGRPGRNGTRGRDGLPGRPGRPATVPIHFLVGQKGEPGLKGLSGEPGEDG PPGEPGESLAYGINTKGPKGYPGLSGQKGLPGLKGERGELGFDGLPGLAGDQGLPGRSQR GEKGFKGFIGIKGSIGPYGIPGARGQQGLKGFPGNPGKKGARGDAGPAILVGEKGFDGIP GVRGDDGDEGYSGVPGRTGSMGPKGIQGPTGDLGPDGPQGPQGRKGMSGIEIRGAPGMSG RPGRPGRIGIVGEPGLQGSNGIPGDMGPKGMKGNTGYMGFIGMRGENGPPGPDGFPGLAG IVGNKGDQGERGDTGANGFDGEPGSIGPIGSPGQKGDQGDIGPDGLPGTDGRPGFKGGRG DVGFPGLPGARGENSLRGMKGDGGQPGLNGIPGRPGLKGFKGIVGDIGSPGVIVTGEPGI KGEKGNDGYPGRNGAVGRKGDQGDIGLIGERGEDGGKGFPGRPGRPGRHGSVGLKGQQGE FGLTGNSGQKGDEGMVGRPGRIGSPGLPGEVGNEGPPGVQGFTGAKGVQGDMGLTTYVAP TKGDIGDIGMEGLPGEPGDTGDIGYVGYVGRKGDRGDVGYQGQVGDTGIPGYRGSTGDQG PPGLPGINAENAPRGEQGKPGFDGLPGWPGPRGQKGKPGEYGINGPDGLPGPPGLSFQGP KGMTGMDGAPGQQGMPGRPGREGFEGSPGMRGFQGDTGEIGDSYSPKGERGDQGQPGFYG AIGQKGELGDNGIDGRRGREGLAGVKGFRGDEGEEGFYGQAGLKGIKGDAGDTVDIFDIK PGPLGDIGPNGFNGQPGQDGKPGAFGRNGVPGSKGERGDIGFPGRAGPQGLMGREGLKGI KGLQGYQGNRGITGNAGIPAVQPMPKSRGFYFTVHSQKRMIPQCPAGTSPLWSGYSLIHI LANGKAHGQDLGASGSCLRKFSTMPYMFCNINDVCNLAQREDFSFWLSTPEPMPMSMTPI RANDVGNYISRCMVCEAPTRTIAVHSQSNIVPDCPVGWRELWQGYSFLMHTAGADATGQS LISPGSCMREFRARPFIECNGLGRCNYFSTSVSYWLSVIDDYRMFDKPEQQTLKADLVSK VSRCAVCMRDWPVPHKSTARAPTTQGDLNSVPNAAIRRPYRPNPRRPYYRRGIRGRRRQ NT seq 5400 nt NT seq  +upstreamnt  +downstreamnt atgtcgggcccggcgcgtgcgcgattcctcgcgctccacctcgtgcccgccacacttttg cttctgctaaggaatcctacccctacatcagcggtagtgtgtaaccaaacagtatgcgac tgtgccggcatcaaaggggacgtaggatctgttggaccacccggtgtgcctggtcttcaa ggtgattacggtgaagatggacctatcggccgcccagggcgacccggtgaggcaggggac atcggtgacagaggcgatttaggagacaaaggaacacagggcattcggggaccttatgga cccagaggggacacaggaccacagggaccctatggacctcaaggagtcccgggtttagag ggttttgatggctgtagcggtatcgatggtattatgggacctcctggaccaatgggtgat gtcggagaaaggggttcacctggacgtggaggagaaaaaggtgatcaaggtgctgctggt gatggcggtgtaaactcgcgtggtgcgaaaggtgattcaggtgaactaggacgccaagga gtgcccggacctccaggagtaatgggttttagaggagatagtggaccgcaaggaccagtt ggtgatgagggactccaaggtattcgcggagaaccaggagatagaggaaaagagggagac gacacaataggaccaccgggagaaaaaggtgatcaagggcccgttggtgagccgggcaga ccagcgtctattattgtgaccagcgaagttcgacagaatattacaattataacaaagggt aacaaaggccaaaaaggacttaagggacagcgaggagtgaagggacttaaagggatgatt ggttccattggtccacgaggaactgatggcttgcctggaattcaaggatacaaaggtgac caaggtcatgatgggcctagaggaaaggttggtcatcgcgggcgagacggtaaccctggc cctaagggagacaagggtgcaccaggatttgctggtccagatggtgcagacggttataga ggagagagaggtgaagatggaatgcctggtaatcctggactacaagggtatgctggtgaa ccgggaatttatgacgataaattggatgtaccacccgtacccggaccaatgggacctcaa ggtcctgaaggttttgtgggtcctatcggtgcacccggctatcctggtcggcgtggttta cctggtgttgtgggtccacccggtttaccaggaatcaaaggaactcaaggaagacaaggt atacccggcacgtcaactaaaggagaacctggtaatgacggtttcaaagggtttcctgga tatagaggaccctcaggttttgaaggaccatctggcgtcgtaggacctagagggtttaag ggatctaaggttattgggcctgttggggaagaaggctcacctggcttagacggaatacct ggtcaaagaggagatcggggtgagtcgggtgacatgggaccttctggttatccggggaca ggtgtacatggagttggtcctccaggagaagaaggccctccaggatttccaggtcaatct ggagacccaggctcacccggacgtccaggatttttaggaccaaaaggagaacgtggtgat gattgtccgtattgtaaatcaggatcagatggtccgaaaggacaacgaggagactatggt ttcaatggacagaaaggttacccaggcttagaagggattccgggagctcgaggcatcaaa ggttttggaggaatacctggactgaagggaccaaaaggtccaaaaggaaataagggaatt gctggtggagcaggaccacaaggatccaaagggccaaaaggaagagtaattttcgacccg ccactagcacaaattaaagcggaagtcggaccacggggtgacagagggttcatgggttac cctggtatgccgggagatgcaggatggccaggtcgcgctggagaaataggttttatgggt atcaaaggtcaaatgggtgatgatggcttccccggcagaccaggaagaaatggaactagg ggaagagacggtctgccgggaaggccaggccgaccagccacagtacctattcatttcctg gttggacaaaaaggagaacctggattgaagggtttatctggcgagcctggtgaagacggt cctcctggtgaacccggtgaatctcttgcctatggaattaacactaaaggtcccaaaggg taccctggactttctggacaaaaaggattgcctggattaaagggagaaaggggtgaatta ggcttcgatggcttgccgggtttagccggtgatcaaggtctacccggtagatcccagcga ggagaaaaaggttttaagggatttataggaattaagggaagtattgggccatacggtata cctggagcaagaggacaacaaggattaaaaggattccctggtaaccctgggaaaaaaggg gcgcgtggtgatgctgggcccgctatactggttggagaaaaaggcttcgatggcatacct ggcgttcgaggtgacgatggcgatgaaggttactctggagttccaggaagaactggctct atgggaccaaaaggaattcaaggaccaaccggagacttaggtccagacggaccccaagga ccacagggaagaaaaggtatgtctggaatagaaattcgaggtgcaccaggtatgtctggt cggccagggagaccaggacgaataggtattgttggcgaaccgggattacaaggatctaat ggaattcctggagacatgggccctaaaggaatgaagggaaacactgggtatatgggattt attggcatgcgaggagaaaacggaccacctggtcctgacggatttccgggtttggcagga atagtgggcaataaaggtgatcaaggagagcgaggagatacgggtgctaatggattcgac ggggaacctggttcaataggtcccataggaagtcccggacagaaaggagatcagggtgat ataggtcctgatggtttaccggggactgatggcaggcctggtttcaagggaggtagagga gatgttggttttccaggattacctggggctagaggtgaaaactctctaagaggtatgaaa ggcgatggaggtcagccgggtttgaatggcattcccggacgccccggtttgaaaggtttt aaaggtatcgtcggtgacattggatctcctggcgtgattgtaacaggagaacctggtata aaaggtgaaaaaggaaatgacggatatccaggaagaaatggggctgttggaagaaaagga gatcagggtgatatcggtcttataggagaacgcggtgaagatggtggtaaaggtttccct ggcagaccaggtcgcccaggaaggcatggatccgttggattaaaaggacaacagggtgaa tttggactcactggaaactcaggacaaaaaggtgacgaaggcatggttggtagaccgggt agaatcggttcccctggacttcctggtgaagtaggtaatgaaggtccacctggagtccaa ggttttacaggagctaagggagtccaaggtgacatgggtctaaccacttatgtggctccc actaagggtgacattggtgatattggtatggaaggattacctggtgaaccaggagataca ggtgacattggatacgtgggttacgttggtagaaaaggagatcgtggtgatgtaggatat caaggacaagttggtgatactggtataccaggctacaggggttcaacaggtgaccaagga cctccaggactacctggcattaatgcagagaatgctccaaggggtgaacaaggaaaacct ggatttgatggtctacctggatggcctggacctaggggacaaaagggtaagccaggtgaa tatggtataaacggtcctgatggattacctggcccccctggtctctcattccaaggaccg aaaggaatgactggaatggatggtgctccaggtcaacaaggtatgcctgggagacccgga agggaaggattcgaaggtagtcccggcatgcgtggattccagggtgacactggcgaaatt ggagattcttacagccctaaaggtgaaagaggtgaccaaggtcaaccaggcttctatgga gctattggacaaaaaggggagcttggcgacaatggtatagacggacgacgaggacgagag ggattggcaggtgtcaaagggttcagaggagatgagggagaagaagggttttacggacaa gctggacttaaaggtattaagggtgatgctggcgatacagttgacatatttgatattaaa cctggaccgcttggcgacattggaccaaatggattcaacggacagcccgggcaagacgga aaacctggtgcttttggccgcaatggtgtgccaggaagcaaaggagagagaggcgatatc ggtttcccaggacgagcaggacctcagggacttatgggacgagaggggctgaagggaatc aaaggcttacaaggataccaaggaaaccgtggtattactggcaatgctggcattccagct gtacaacctatgccaaaatctcgaggcttttactttacagtacattcacaaaaaagaatg attccacaatgtccagcaggaacttcacccctttggagcggatactcccttatacatatc cttgctaacgggaaagcacatggacaagacttgggtgcttcaggaagctgtttacgcaaa ttttcgacaatgccgtatatgttctgtaacatcaatgatgtttgcaacttggcccaacgt gaagactttagtttttggctatcgacgcctgaacctatgcctatgtccatgactcccata cgcgcaaatgatgttggcaactatatttctaggtgtatggtatgtgaggcaccaacccga acaatagctgtgcatagccaaagtaacatagtccccgactgtcctgttgggtggcgagaa ttatggcagggttacagtttcctaatgcacactgctggagcggatgccacaggtcaaagt cttatatcccctggatcctgcatgagggagttccgagcacgtccattcattgaatgtaat ggacttggacgctgcaactacttttcaacttccgtttcctactggctctcagttatagat gattacagaatgtttgacaaacctgaacagcaaaccttgaaagccgaccttgtctccaaa gtgagccgctgtgctgtttgcatgagagattggcctgtgccacataagagcacggctcgc gcacctacaactcaaggagacctgaactccgtgcctaacgcggctatacgaaggccatat cgtccgaacccgcgtcgaccctactaccgtcgtggcatacgtggaaggcgtcggcaatga

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