KEGG   Trichoplusia ni (cabbage looper): 113501566
Entry
113501566         CDS       T05757                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113501566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113501566
   03036 Chromosome and associated proteins [BR:tnl03036]
    113501566
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     113501566
Chromosome and associated proteins [BR:tnl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     113501566
    COMPASS/SET1 complex (yeast)
     113501566
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD_LRWD1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 MIOS_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 113501566
NCBI-ProteinID: XP_026738568
UniProt: A0A7E5WCY0
LinkDB
Position
15:complement(6958052..6959933)
AA seq 315 aa
MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQMITV
NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPVE
DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF
DKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNNK
GIPIEASFSPDSQYIFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFSPKFMMLAS
ACTNMAFWLPTIDDV
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatgaaactggtcgaccaagtggtacgaagttttaaagtagctaaggtgtttcgagaa
aacacagacaaaataaacagtattgacttttctccaagtggcgagacactaatatcttgt
agcgaagatgatcaaattgttatatatgattgtgagaaaggcacgcagatgattacagtc
aacagtaaaaagtatggtgtcgatctcatacacttcacacatgccaagaacacagctata
cacagttcaactaaagttgatgatactataagatatttgtcacttcatgataataagtat
atcaggtatttcccgggacacactaagaaagttgtaacattatgcttgtcaccagttgaa
gacacatttctgtctggatcattggacaaaacactgcgcttgtgggacttgcgatcacca
aattgtcaaggcttgatgcatctgtctggaagacctgtagcagcttatgatcctgaaggc
cttattttcgcagctggtgttaattctgaaagcattaagctgtatgacttacggtcattt
gataagggcccctttgtcaccttcaagctaaatcaagagaaagaatgtgactggactgga
ttaaaattttcacgtgatggaaaaacaatgttgatcagtacaaatggatccataatcaga
ttagtggatgcatatcatggcactcctttgcagacatttactggtcatcttaataataaa
ggcatacctatagaggcctcatttagtccagactcacaatatatcttcagtggctcgacc
gatgggagagtccatgtctggaatgctgacactggatataaagtgtgtgttttaaatgga
gatcatcctgcacctatacaatgtgtacaattcagtcctaagttcatgatgctggcttct
gcttgcaccaatatggcgttttggttgcccacaatagatgatgtttaa

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