Trichoplusia ni (cabbage looper): 113501635
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Entry
113501635 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113501635
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113501635
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Helicases
113501635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
TniB
Motif
Other DBs
NCBI-GeneID:
113501635
NCBI-ProteinID:
XP_026738608
UniProt:
A0A7E5WD11
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All DBs
Position
16:2599785..2605355
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AA seq
611 aa
AA seq
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MDAYDIFKKLTKGLTFKHRVLGVNNNNTLLKPVKKEEIEIKQEQISDNEEDSQSLSEHTA
SESEGQSDQEDNDLQLIDGVKVGKKKKKEKKEKSEDLKKKLLLEEQNRFRNEHGIKTVGR
HVPAALQDFSELMSRYNVSQGLVDTVRECGYTEPTPVQRQAIPCMLEDRQILACAPTGSG
KTAAFLVPILHSLGPPQGGPRALILCPTRELAHQIYREALRLSASTLLRCSVVKNIKESK
VKEREATIRKSDIVVSTPNRLCYLLNQDTVNISLDKVRWLVIDEADKLFEGSADQQSDFR
QQLEQVLAACGGRARRLAMLSATHTPAVAKWARHHMRGVINVTVGQRNAATNLVDQKLLF
CGNENGKLVAFRQLVQEGLKPPVLVFVQSKDRAKQLFKELIYDGINVDVIHADRTQMQRD
NVVRSFRVGRIWVLICTELMGRGIDFRGVNLVINYDFPPSAIAYIHRVGRAGRAGQKGRA
ITFFTQDDIGNLRSIASVIKQSGCEVPEYMLQLKQNPNKRKKLMKKAPSRDKISTILEKR
PDKRKLDAANAVIADKSKPTDSIKNSKNNKQRKIVNGNTQNKHKKEVTEKGNKVKKRKKK
ALGNKNKKAGN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatacgacatatttaagaaattaactaaaggtttaacttttaaacaccgtgtt
ttaggtgttaataacaataacacattacttaaaccagtcaaaaaagaagaaatagaaatt
aaacaagaacagataagcgacaatgaagaagactctcagagcttatcggaacatacagct
tcagagtctgagggtcagtcagatcaagaggacaatgacttgcagctgatagatggagtg
aaagtgggaaagaagaagaagaaagagaagaaggaaaagtctgaggatttgaagaaaaaa
cttttattggaggagcaaaaccgtttccgcaacgagcatggtattaaaactgttggtcgt
catgtaccagctgctttacaagacttctccgagttgatgagtcggtataatgtgtcccaa
ggcctagtagacactgtgagggagtgtggttatactgagcccactccagttcagcggcag
gctataccttgtatgttggaggaccgtcagatcctcgcatgcgcacctaccgggtctgga
aagacagccgctttcctcgttcccatcctacactccctaggtccccctcagggagggccc
cgagccctcatcctctgccctacaagggagctagcccatcagatataccgcgaagctctc
cgattgagtgcatccacattactgcggtgtagtgtagtcaagaatattaaagaatcgaag
gttaaagaaagagaagccacgatcaggaagagtgatatagtggtcagtacaccaaatcgt
ctctgctacttactcaaccaagatactgtcaacatttctctagacaaggtacgctggctg
gttatcgacgaggcagacaagttattcgagggttcagccgaccagcagtcagacttccgg
cagcagctggagcaggtgctggcggcgtgcggcgggcgggcgcgccgcctcgccatgctc
agcgccacgcacacgcccgccgtcgccaagtgggccaggcatcacatgcggggcgtcatc
aatgttactgttggacagaggaacgcagcaacaaatctagtagatcaaaagctgttattc
tgcggcaacgaaaacggcaaactggtcgccttcagacaactcgtgcaggagggattgaag
cccccagtcttagtgttcgtgcaaagcaaagaccgcgcgaaacaattattcaaagaattg
atttacgacggtattaacgtggacgtcatacatgcagacaggacacagatgcagcgagac
aacgtggtccgcagcttccgtgtgggccgcatctgggtactgatctgcacggagctgatg
ggccggggtatcgacttccgcggcgtcaacctcgtcatcaactacgacttcccgccgtcc
gccatcgcttatattcatagagttgggcgagccggccgcgcaggacaaaaaggtcgcgcg
ataacattctttacacaagatgatattggcaacctaaggagcatagcatcagtaattaag
cagtccgggtgcgaagtccctgagtacatgctgcaattaaagcagaacccgaataagcgc
aagaaactcatgaagaaagcccccagcagggacaaaatatctactatattggaaaagagg
cctgataaaagaaaattagacgcagccaacgcagtaatcgctgataagagtaaacctaca
gactcgataaagaatagtaaaaataataaacaaagaaaaatagtgaatggaaacacgcag
aacaagcataaaaaagaagtaacggagaagggaaacaaagttaagaagagaaaaaagaag
gctctaggaaataagaacaagaaagctggaaactag
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