Trichoplusia ni (cabbage looper): 113501741
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Entry
113501741 CDS
T05757
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113501741
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113501741
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
HHH_3
Motif
Other DBs
NCBI-GeneID:
113501741
NCBI-ProteinID:
XP_026738763
UniProt:
A0A7E5WDG9
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All DBs
Position
16:1864092..1877434
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AA seq
885 aa
AA seq
DB search
MSNGTSPSVLSFLRQYRFQRKPNGPAGPSCPVTVTSAPSSSQLNQTQIRMAAPNTVVRNG
PIVYKRIRIQDSDSDDAASPAKKPAVTVELTPALKERRFSNMKEMFPDISPIFIKNTLAK
HGWNEERSRDELLKHDPESNDRGSTPQHAFFGGRPGVSGSGARPYTNMGIVRVTSGPKMN
VVVRKPLEAKGGRARRGSSGSEDDDYGVRKGKDDRVYDSEDSDNEITDDLIGDKKKVFEF
LNNSNMHELSLLSGCSQKKAEAIIALRPFKGWVDMVDKFNSNKTLSTELLNSTQELLTTR
NNIQRLMKKCVGLAQQLEAAVAAGAGRLKQPAILDESLTLAPYQLVGLNWLAVLHKQGVS
GILADEMGLGKTVQVIAFLAHLKETGQARGTHLVVVPASTLDNWSSELSRWCPALRVSKY
YGHPEERRQLRIQYARGLHDVDVVLTTYTMVNSCPEERKMFRITPMHYVIYDEAHMLKNM
STQRYDNLLKIKSKHRLLLTGTPLQNNLLELMSLLAFVMPHMFSGKTDDLKSLFQKNAKS
KTTKKVDGKTEEDELPFEQSQITQAKRIMKPFVLRRLKRDVLQDLPKKTNHRELCPMSER
QEILYKNLIAGFSAKDGTIRATTEQSGMAMMMDMRKLANHPLLLRYHYSDAGLRALAGRL
ASHPRYKENNAQYAWEDLLCLSDFQIHQLTQQYSTISSHALPEHLILDSGKFQKLDEMLP
RLKAGGHRVLIFSQFTMMLDILEPYLTIRDHKYLRLDGSTAVVDRQELIDRYNTEDIFVF
LLSTKAGGLGINLTAADTVIIHDIDFNPYNDKQAEDRCHRMGQTRPVTIYRLLSCGTIEE
GIYQVAQEKLNLEKHVTGDDDNESTEQKNVVRLLSAALGLTSPSK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggtacaagtccgagtgtgttaagttttttgagacaatacagattccagagg
aaaccaaacggtcctgctggacccagctgtccagtcaccgttacctcggctccgtcaagt
tctcagttaaatcaaactcaaatcaggatggccgccccaaacactgtagttagaaatgga
ccaatagtgtacaagcggataaggatacaggactctgattccgatgatgcagcttctcca
gcgaagaagcccgcggtgactgtagaactgacaccagctctcaaggagaggaggtttagt
aatatgaaagaaatgttccctgatatatctcctattttcattaaaaacacactagcaaaa
cacggttggaatgaagaaaggtcgagagatgaattactgaaacacgaccctgagagtaac
gaccggggttctaccccccaacacgcgttcttcgggggccgccccggagtttccgggtct
ggggcccggccgtacaccaacatgggaatagtgagggttaccagtgggcccaagatgaat
gtcgtggtgaggaaacctctggaggctaaagggggaagagcgaggagaggcagcagtggc
agcgaggacgatgactacggtgtcagaaaagggaaggatgatagagtgtatgatagtgag
gactctgacaatgagatcacggatgatctgattggtgacaagaagaaggtgttcgagttc
ctaaacaacagcaacatgcacgagctgtctctgctgagcgggtgctcgcagaagaaggca
gaggccatcatagctttaagacctttcaaaggctgggtagatatggtggacaaattcaat
agcaataaaactctaagtacggaactgttgaactcgacgcaagagctgctgacgacccgc
aacaacatacagcggctgatgaagaagtgcgtcgggctggcgcagcagctcgaggcagct
gtggctgcaggcgctggccggctcaagcagcccgccatattggatgagagtttgaccctg
gccccgtaccagctggtcgggctgaactggctggcggtcctgcacaagcagggcgtgtcg
ggcatcctggcggacgagatgggtctcggcaagaccgtgcaggtgatcgccttcctcgcg
cacctgaaggagaccggccaggccaggggcacgcatctggtcgtcgtgcctgcctctacg
ctcgacaactggagcagcgagttgtctcgctggtgtccggccctgcgcgtgagcaagtac
tacggacaccccgaggaaaggcgacagctgcgcattcagtacgcgaggggactacacgac
gtcgatgtcgtgctcaccacatacacaatggtgaacagttgtcctgaggagcgcaagatg
ttccgcataacacccatgcactacgtcatatacgacgaggcgcatatgctgaagaacatg
tccacgcagagatacgacaatctacttaaaattaagtctaagcaccggctgctgctgacg
ggcactccgctgcagaacaacctgctggagctgatgtcgctgctcgccttcgtcatgccg
cacatgttctctgggaagacagacgacctcaagagcttgttccagaagaatgctaaatca
aaaacaacgaaaaaagttgacggtaaaactgaagaagacgagctcccattcgagcagagc
cagataacgcaagccaagcgcatcatgaagccgttcgtactgcggcgtctgaagcgggac
gtcttgcaggacctgcccaagaagaccaaccacagggagctctgccccatgtccgagagg
caggagatcttgtataagaatctgattgctggtttttctgctaaggatggcacgatccgc
gcgaccaccgagcagagcggcatggccatgatgatggacatgcgcaagctggccaaccac
ccgctgctgctgcgctaccactactcggacgcggggctgcgcgcgctggcgggccgcctg
gccagccacccgcgctacaaggagaacaacgcgcagtacgcctgggaggacctgctgtgc
ctgtccgacttccagatacaccagctcacgcagcagtacagcacaatcagctcgcacgcg
ctaccggaacacctgatcctggactcgggcaagttccagaagctggacgagatgttgccg
cgactgaaggcgggcggccaccgcgtgctcatcttcagccagttcaccatgatgctggac
atcctggagccatacctcaccatccgcgaccacaagtacctccgcctcgatggcagtacc
gctgttgttgacagacaagagttaatagaccgctacaacacagaggacatatttgtgttc
ctgctgtcgacgaaggcgggcgggctcgggatcaacctcaccgccgctgacaccgtcatc
atccacgacatcgacttcaacccctacaacgacaagcaggctgaggacagatgtcacagg
atgggccagacgcggccggtcacgatataccggctgctcagctgcgggaccatcgaggag
ggcatctaccaggtcgcgcaggagaaactcaacctcgagaaacatgtcaccggtgatgat
gataatgaatctacggaacaaaagaacgtcgtgcggttgttgtcagcggcgctgggcctg
acctcgcccagtaaatga
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