Trichoplusia ni (cabbage looper): 113502029
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Entry
113502029 CDS
T05757
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113502029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113502029
Spliceosome [BR:
tnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113502029
Complex C
U5 SnRNP specific factors
113502029
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
113502029
NCBI-ProteinID:
XP_026739192
UniProt:
A0A7E5WFK0
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All DBs
Position
16:745019..758166
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPAQPPKPHHIPEEKIK
EKAQKWMQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDPEEDGAVASWFYDHK
PLLGTKHVNGSTYRKWNLTLPQMATLYRLGNQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHSVKSLDPLPDEEEYVLAEDVTPFLQETAL
YTDNTANGIALLWAPRPFNMRSGRTRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVIINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLSYQDRQTETAHPIRLYCRYVDRIHIFFRFTAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQHEELCHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEPHHIWPTLSDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
ADNPMVREVQCAVVPPQWGTHQQVHLPRHLPKHPALQHLQPLGWMHTQPNELPQLSPQDI
TTHAKVMAENPSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGARNTDRGNNPKGYLP
SHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDAAAPTLAADREDHFA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccgtatttactggggcccaatccctgggcaaccatgatggcgcagcag
cagttggcggcagcgcagcaggcggctttgcaagcccacgctgccgccgctgcggctgcg
ccaccggtgcctccggcgcagccccctaagccccatcatatacccgaagaaaagataaag
gagaaagctcaaaaatggatgcaactccaatcaaagcgctttgccgaaaagcgcaagttt
ggtttcgtggatgcacagaaggaagacatgcctcccgaacacattcgaaagatcatcaga
gaccatggagacatgaccagtcgcaaatacagacacgacaagcgtgtctatcttggagca
ttgaaatacatgcctcatgcagtcatgaaacttcttgagaacatgcctatgccatgggaa
cagattcgcgatgttaaagttctttaccacatcactggggccatcaccttcgtcaatgaa
atcccgtgggtaatagaaccagtttacatagctcaatggggcacaatgtggatcatgatg
cgtagggagaaacgtgaccgtaggcatttcaagcggatgagattcccgccatttgacgac
gaggaaccacctctagattatgctgacaatatcctggatgtagaacctcttgagcccatt
cagattgaactggacccagaagaagatggagctgtcgcgtcgtggttttacgatcacaag
cctttattaggtactaagcatgtcaacggttccacatacagaaaatggaacctgacttta
cctcagatggcgaccttataccgtcttggaaatcagttactgactgacttagtagacgac
aactatttctacctctttgattccaagagtttcttcaccgctaaagccttaaatatggcg
atccccggaggaccgaagttcgaacctcttgttaaggataattcagcgggtgacgaagat
tggaatgaattcaatgacatcaacaagattatcattcggcagccaatccgtactgagtac
agaatcgctttcccgtacttgtacaacaacttgccgcacttcgttcaactgtcctggtac
cacacaccgaacgtcgtatacatcaaaactgaggatcccgatctacctgcattctacttc
gatcctctcatcaatcccatctctcatcgccactcagtcaagtctttagacccactgcct
gatgaagaagagtatgtgttagctgaagatgtgactccattcttgcaagaaaccgcgctg
tacactgacaatacggctaatggaattgctttattgtgggcgccaaggccttttaacatg
cgatcaggacgcacacgacgtgctatcgacgttcctcttgttaagacttggtacaaggaa
cattgcccgcctggacaacccgtaaaagtgagggtctcgtaccaaaaacttctgaaatat
tatgtgctgaatgcattgaagcatagaccaccaaagccgcagaagaaaaggtacttattc
cgctcattcaagtcaactaagttcttccaaaccacaactttggactgggttgaagctggt
ctccaagtatgtcgccaaggttacaacatgctgaacttgctcatccatcgcaaaaacttg
aactatctgcatttggattacaactttaacctgaagccagtcaagactttaaccacaaag
gagagaaagaagtcgcggtttggtaatgctttccatttatgccgtgaaatcctacgtcta
actaaactgatcgtcgactcccacgtacaataccgtctgaacaacgtggactccttccaa
ctggctgacggtcttcaatacatctttgctcacgttggccagctgaccggcatgtaccgc
tacaagtacaagctcatgagacagatcaggatgtgcaaggatcttaagcatctgatctac
tatcggtttaatacgggtccagtatcaaagggacctggctgcggtttctgggctccagga
tggcgagtatggttgttctttatgcgtggtataactccattgcttgaacgctggctcgga
aacttgctgtcgaggcaattcgaaggccgacactccaaaggtgtagcaaagacagtcacg
aagcagcgcgtcgagtctcacttcgaccttgaattgcgtgcgtccgtcatgcacgatatc
gttgatatgatgcctgaaggtatcaaacagaacaaggccaggactatcctgcagcatctg
tctgaggcctggagatgctggaaagctaatattccttggaaggtgcccggtctcccaaca
ccgatagagaacatgattctccgttacgtaaagatgaaggccgactggtggacaaacacc
gcccactacaaccgtgagcgtattcgtcgcggcgctaccgtcgacaaaaccgtgtgtaag
aagaatctgggacgactcacgaggttatacctcaaggctgagcaggagaggcagcataac
tatttgaaggatggtccatacatttctcccgaagaagccgtagccatttacactacaaca
gtacattggctcgagtcgcgtcgcttcgcccccattccgttcccgccactttcctacaag
cacgatactaaacttctcatcctagcgctggagagattgaaggaagcttacagtgttaag
tccaggctcaatcagagccagagagaggagttaggtctcatagaacaggcttatgataat
cctcacgaggcgttgtcgagaatcaagcgtcatttgctcacacagaggacgtttagagag
gttggtatagaattcatggacctatactcccacttggtgcccgtatacgacgttgagcct
ttagaaaagattacggacgcctatctcgaccaatacttgtggtatgaggctgacaaacga
cgcttgctgccaccatgggtgaagccagcggacactgaaccatcgccgctactcgtgtat
aaatggtgtcaaggtataaacaacctgcaagatgtatgggaggtcggcgaaggcgaatgc
aacgtccttctagagtcacgattcgagaagttgtacgaaaagatagatttgacgctactc
aatcgacttcttcgtcttattgttgaccacaatatcgctgactacatgactgctaagaac
aacgtcattattaattacaaggacatgaaccacacaaactcatatggtataatccgaggt
cttcaattcgcctctttcatagtccagtactatggtttggtactggacttgcttgtgctt
ggtctgcaaagagccagtgagatggcgggtccaccacaactgcccaacgacttcttgtcg
taccaagacagacaaacagaaactgcgcatccgatcagactgtattgcagatatgtggat
agaattcatatattcttcaggtttactgcagaagaagctcgtgacctgatccaacgatac
ctgactgagcatcctgaccctaacaatgaaaacattgtcgggtataacaataagaagtgc
tggcccagagatgcgcgtatgcgtcttatgaaacatgatgtcaaccttggccgagctgta
ttctgggatataaagaaccgtctgcctcgttcagtcaccaccattcagtgggagaacagt
ttcgtttctgtttattcaaaggacaatcccaacttgctgttcaacatggctggctttgag
tgcaggatactgccaaagtgccgcagtcaacacgaagagctctgtcatcgtgacggcgta
tggaatctacagaatgaagtgacaaaagaacgaactgctcagtgctatcttcgtgtcgac
gacgagtccctagctcgcttccataacagagtccgacagattctcatggcgtcaggctct
actaccttcacgaagattgtcaacaagtggaatacagcgcttattggtctgatgacatac
ttccgtgaggctgtagtcaacacacaggagcttctcgatctgcttgtgaaatgcgagaac
aagatccaaactcgtataaagatcggtctcaattccaaaatgccttcccgtttcccgccc
gtcgtgttctacacacctaaggagctgggaggactgggaatgttgtctatgggtcatgtc
ttgattccgcagtctgatctccgctggtctaaacaaacggacgtgggcatcacacatttc
cgttcgggtatgtcgcacgacgaagaccaactgattcccaacttgtaccgctacatccag
ccgtgggaggccgagttcgtcgactcgcagcgcgtgtgggcagagtacgcactcaagagg
caggaggctaacgcgcagaatagacgtcttaccttggaagatctagaagattcgtgggac
agaggtattcctcgtatcaatacactgttccagaaagacaggcacacacttgcttacgac
aaaggatggcgtattcgtaccgaattcaaacaatatcaggtcctaaagcagaatcctttc
tggtggactcaccaacggcacgacggtaaactctggaaccttaacaactaccgtactgat
atgatacaagcactaggaggagtagaaggcattctcgagcacaccttattcaagggcacc
tacttccccacctgggagggtctcttctgggagaaagcatcaggtttcgaagagtcgatg
aagtacaagaagctgaccaatgctcagcgttctggtttgaaccagattcccaaccgtcgt
tttactttatggtggtcacctaccatcaacagagccaacgtgtatgtcggtttccaggta
caactggatttaactggtattttcatgcacggcaagattccaacgctaaagatttcgctc
attcaaatcttcagagctcacttgtggcagaaagtccacgagtctatcgtcatggacttg
tgtcaggtattcgatcaagagctagacgcattagaaatcgagacagtacagaaggaaacc
atccatcctcgtaaatcttacaagatgaactcgtcatgcgccgacatcttgctattctct
gcctacaaatggaatgtatcaagaccgtctttactcgccgacaccaaagacacaatggac
aataccacaacacagaagtattggcttgacatccagttgcgttggggagactacgactcg
cacgatgtggagagatacgctcgtgctaagttcttggactacaccacagataacatgtct
atatacccctcgcccactgggctgctcatcgctatagatcttgcgtataacctgcacagt
gcttatggtaactggttccctggatgcaagcccttaatccagcaggcaatggcgaagatt
atgaaggcgaacccagctttatatgtattgcgcgaacgtatccgtaaagcattacaactg
tactcgtccgagcccactgaaccgtacctatccagtcagaactacggtgaactgttctcc
aatcaaattatttggttcgttgacgacacgaatgtataccgtgttactatccacaaaaca
ttcgagggtaacttgacgaccaaacccatcaacggcgctattttcatcttcaacccgcgt
acaggacaactgttcttgaagatcattcacaccagcgtgtgggccggacagaaacgtctt
ggacagctcgctaaatggaaaaccgccgaagaagtagcagctttgattcgttctctccct
gttgaagagcagcctaaacagatcattgtcaccagaaagggaatgttggatcctctcgag
gtccacttgctagacttcccgaacattgtcatcaagggttcagaactgcagctgcctttc
caggcttgtctcaaagttgagaagttcggagaccttattcttaaggctacagaaccacag
atggtgctattcaacctctatgacgattggcttaaaactatttcgtcatacacggcgttc
agtcgtctgatccttatcctgagagccctccatgtgaacacggagcgcactaaagtcctg
ctcaaaccagacaagactacactgacagagccacatcacatctggcccacactcagtgat
gatgactggatcaaggttgaagtgcaactcaaggatcttatccttgccgactacggaaag
aagaacaatgtaaacgtagcgtcgctgacacaatcagaaatccgtgatataatcttgggt
atggaaatatctgcgccctcagcacaacgacaacagattgcggagattgagaagcagagt
aaagaacaaagtcagctcactgctactactacaagaacagttaacaagcatggagatgag
atcattacgtcgacaactagcaattacgagtcacagacgttcagctccaagacagaatgg
cgtgtgcgtgccatatctgcgacgaacttacatcttcgtactaatcacatctacgtgagc
tcggacgacatcaaagagagtggttacacctacatcctgcccaagaacttgctcaagaag
tttgtcactatctctgatttgagagcacagatcgcttgctacctgtacggcacgtcgccg
gcggacaacccgatggtccgcgaggtgcagtgcgcggtggtcccgccgcagtggggcacg
caccagcaggtgcacctgccgcgacacctgcccaagcaccccgcgctgcagcatctgcag
ccgctcggctggatgcacacgcagcccaacgagctgccgcaactctcgccacaggatata
acaactcacgcgaaagtaatggccgaaaacccatcttgggatggcgaaaagacaatcatt
ataacttgctcattcacacctggttcatgttcgctgacggcttacaaactgacacccagc
ggatacgaatggggcgcgagaaacaccgataggggtaataaccctaaaggttatctgccc
agtcattatgaaagggtccaaatgctgttgtctgacagattcttgggatacttcatggtt
ccatcgcaaggcagttggaattacaatttcatgggtgttcgtcacgacccgaacatgaaa
tacggcgtacagctgggtaacccccgcgagttctaccacgaggtgcaccggccagcgcac
ttcatgaacttcgcggctatggaggacgccgccgcgcccacgctcgccgccgaccgcgag
gaccactttgcgtag
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integrated database retrieval system
