Trichoplusia ni (cabbage looper): 113502196
Help
Entry
113502196 CDS
T05757
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113502196
03015 mRNA surveillance pathway
113502196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113502196
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113502196
mRNA cycle factors
P-body specific factors
113502196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
113502196
NCBI-ProteinID:
XP_026739441
UniProt:
A0A7E5WH20
LinkDB
All DBs
Position
16:complement(9341749..9345799)
Genome browser
AA seq
511 aa
AA seq
DB search
MTEDQDAKDSQSDSGSKTFINKNKDKKTKSQRPLTKIILRRLPPSMTEEAFLEQVSPIPD
HDHFYFAKPDPSLGNNLYCRAYINFVNVDDIYLFRDKFDGYVFLDEKGVEYVGIVEYAPF
QRIPKKKKKKDPKCGTIESDPIYQDFVEGLKKDPETENQPKLEYSYPVNDANDKKVQSTP
LLEYLAARKQDKRGRDERRRRENDKRKMRIERKTKENPIKEEETGDGEVKKIKSREWEKE
KASDARDDQVKSENRDGSVFESKSYRDQRKAGINSLSDKKKKLETDKRDNARDDEQGDDS
DRGAKKDKRDKFKDSPREQKSKKYSDTRKERIKSTDFGKSDKQSAINKIMSLENKGKSIN
HDDIKPFTQLPHVKTDDLTKIIEGMDKKMKQEESSKDTSEEAFPKSATVGVAKMRRNSLE
SGEQSVKEEAVLKRQKSLDDRSKSSDREGSEEKEKSESGDRRTERRIRNKDRPSLVIYQP
GMGKFSKQRLAKEKDTQPPTKSVNDSEKKDT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagatcaagatgctaaagattcgcagtcggattcgggcagtaaaacatttatt
aataagaacaaggacaagaaaacaaaatcccaacggccgctgactaaaataattctccgg
cgcttgccgcctagtatgactgaagaagcattcttggaacaggtttcaccaatacctgat
catgaccatttctattttgccaagccagatccttcgcttggcaataacctatattgtaga
gcttacataaacttcgtcaatgtcgacgatatttacttgtttagagataaatttgatgga
tatgtgtttcttgatgaaaagggtgtggagtatgtgggcatagtggagtatgctcctttc
cagaggatacctaagaaaaagaagaagaaagacccaaagtgtggcaccatagagagtgac
cctatttatcaagactttgtggaaggtctcaagaaagaccctgagactgagaaccaacca
aaacttgagtactcttaccctgtgaatgatgccaatgacaaaaaggtacaatcaactcct
ttgctggagtacctggcggcgcgcaagcaggacaagagggggcgtgacgagcgtcgcagg
agagagaatgacaagaggaaaatgaggatagagaggaaaaccaaagaaaatcccatcaag
gaggaagaaactggagacggcgaggttaagaagattaaatctagagagtgggagaaagag
aaagcgagtgacgcgcgtgatgaccaagtcaagtcggagaaccgagatggatctgtattt
gaatctaaatcttatagggaccagcgcaaggctggaattaattctttaagtgacaaaaag
aaaaagcttgaaactgataagagggataatgcaagagatgatgaacagggggatgactcg
gacaggggcgcgaaaaaggataaacgcgataagttcaaagactcgccgcgtgagcaaaaa
agtaaaaagtacagcgacactagaaaggagcgaatcaaatctaccgattttggaaaatcg
gacaaacaatcagctataaataaaatcatgtctttagaaaacaaaggaaagtcaataaac
cacgacgatataaaaccatttacacaactgccgcatgtgaagactgacgacttgaccaaa
attatagagggaatggataagaagatgaaacaggaagaaagtagtaaggacaccagtgag
gaagcatttccaaagagcgcgactgtcggtgtggcgaagatgaggaggaatagcttagag
tcgggtgaacagtctgtgaaggaggaggcggtgctcaagaggcagaagtcacttgacgac
aggagcaagtcatccgatagggagggctcagaggagaaagagaaaagtgaaagtggtgac
cgtcgcacagaaagaagaattagaaataaggatcgtccaagcctcgttatctatcagcca
ggcatgggcaagtttagtaaacagcgtctcgcgaaggaaaaagacacacagccgccaacc
aaatccgttaacgatagtgaaaagaaagacacctga
DBGET
integrated database retrieval system
