Trichoplusia ni (cabbage looper): 113502287
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Entry
113502287 CDS
T05757
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113502287
03015 mRNA surveillance pathway
113502287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113502287
03041 Spliceosome [BR:
tnl03041
]
113502287
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113502287
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113502287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113502287
NCBI-ProteinID:
XP_026739596
UniProt:
A0A7E5WGR7
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All DBs
Position
17:1905944..1912692
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AA seq
938 aa
AA seq
DB search
MMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQSSENGIPET
FTQQKKEEIKKRMEEQQKDKEKEKDRRRSRSRSRSRRRSRERRRSRSRTRDRSSDRKHRN
GGSPRRSRRRSRDRSSQSKSSHVEDVKAAEPKENGKSPEKKEDNEVKEEVNHNTSNDTSK
DESKENVLKEDKTEDEGHKSRSASPEKPNGDKPTEEKPVEKARRSSSERRSSSASSRGSA
KKRSSHKKRQYRSNRDSSTSVSPRRSSRRERSKSRRRSSRRRSIERRDRERERERERERE
RERRRRERERRERSRERRRSLERRRRSRSRSRRRQTRERSRDRRRSRSRRRTASRSRRRS
GRGSRDRRSRDRRSRDRRSRDRSRERRSKDRTKDRRSRDRKSRDRRSSDIIKERLEKSVS
IPRKENLDKLHKKSSERVSLLREQSKERAVSSSSRESSVVNEKPVPQNDEQPKPVQSSDD
EEKEDIIAIPTLREFSKSLSRTPSPFLRKHEIEHKKSDRSGDDVSVKEQNEEEAKPRDVK
KGKRKTQQSESESESSEEVLKAKTKAKVKRKDKATSKKSKKPKKESSSSESDSEDSSSSD
SEDDRKKKNKKNAKKKLAKKSRKKRARSSSSESSSEEEVKHKSSKSKQKNIPEESDVDKK
SKKRNKDTSIDHSRSEKSESKQKSKKIENTDDSHDDTSESDEKSTKKKAVKRDSSSSEKE
TKRSKKTEPAKERATSPDGTKSRKAEEKVIKTKHEEVKSKSRDDTEKKAKKREKEESSSD
SDQVSKKKARKKVSESDSESDSDEPKKSKKAKKHKKHSKKHKKHKKHKKASKKKDDSSDS
EEAEEEEEGKVNNEDLEKKLRERALKSMKKQTSASGSD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtatacggggacaagcacggagcaggacacccgcttcagcgacaaggagaag
aagctgatgaagcagatgaagtttggtgattgtttaactcagcaggtggacatgtccaag
gtgaagttggatgtgctgaagccatggataactcagaagataacagaaattctcaagatg
gaagatgatgtagtcattgactatgttaacaaccagcttgaggaaaagttcccttgtcca
aagaaaatgcagatcaacttaactgggttcttgaatggcaaaaatgctcgactattcatg
ggcgagctgtgggagctgttgctgagtgctcaatccagcgagaatgggattccagagaca
ttcacccaacagaagaaagaggagatcaagaaaagaatggaggaacagcaaaaggacaag
gagaaggagaaggatcgtcgcaggtcgcggtcacggtcgcgttcccggcgacgttcgcgg
gagcggcggcgctcgcggtccaggacacgagatcgctcttctgacaggaaacaccgtaac
ggaggcagcccgcggcggtcgcggaggcgcagtcgggacaggagcagccagtcgaagtct
tcgcatgtggaagacgtaaaggcagctgaacctaaagaaaatgggaaatctcctgagaag
aaagaagataatgaagttaaagaagaagtcaaccacaatacttcaaatgatacttctaag
gacgaaagcaaagagaatgtcctcaaggaggataaaactgaagatgaagggcataagtct
cggtctgcttcacctgaaaagccaaatggtgataaacccactgaagaaaaaccagttgag
aaagctagacgctcgtctagcgaaagacgttcttcatctgcatcatcacgcggtagtgct
aagaagagatcatcacacaagaagcgccagtatcgttccaacagagattcgtctacgagc
gttagtcccagacgtagctcacgccgagaaaggagtaagtcacgtcgtcgcagcagccgc
cgtcggtctatagaacgacgcgatagggagcgtgaacgtgaaagggagagggaacgtgag
agggaacgtagacgacgtgaacgagaaagaagagagaggtctcgagaacgtcgtcgttca
cttgagagacgtagacggtctcggtcacgttcaagacgacgtcaaacacgggaaaggtct
cgtgatcgtcgccgttcgaggtctcgcaggcgaaccgcgtcccggtctcgtcgccgctct
ggtcgtggctcgcgggatcgtcgctctagggaccgacgatccagggataggcgctctaga
gatagatctagggagaggagatccaaagatcgcactaaggataggagatcgcgggataga
aaatcacgagacaggagatctagtgacattattaaagaacggctagaaaaatccgtctcc
attccccgtaaagaaaatctagacaagctgcataagaagtcttctgagcgagtgtctttg
ttacgagagcagtcgaaagaacgagcagtatcaagttcgagtagagaatcatccgtagtt
aatgaaaagccagttccgcaaaacgatgaacaacccaaacccgttcagtcatccgacgac
gaagagaaggaagatatcattgcaattcctacattacgagaattttctaagagtttatcc
cgtactccatcgccgttcttgcgcaaacatgaaattgaacacaaaaaatctgacagatcc
ggtgatgatgtatcagtcaaagagcaaaatgaagaagaagctaagccaagggatgtgaag
aaaggtaaacgcaaaactcaacaatctgagtcagagagtgagagcagcgaagaagtgttg
aaagctaagaccaaggcaaaggtaaaacgcaaagataaggcaacatcaaaaaaatccaaa
aagccgaagaaagaaagttcttcaagtgagagtgattcagaagatagctcttcaagtgat
tctgaagatgaccggaagaagaaaaataaaaagaatgctaaaaagaaattagcaaagaaa
tctcgcaagaagagagcgcgttcatctagttctgaatcgagttcagaagaagaagttaag
cacaagagttccaaatcgaaacaaaagaacattccagaggaatctgatgtagacaagaaa
tcaaagaagcgtaacaaagataccagtattgaccattcaaggtcggaaaaaagtgaaagt
aaacaaaaatccaagaaaattgaaaacactgatgactctcacgatgacacatctgaaagt
gacgaaaagtcaaccaagaaaaaagctgtaaaacgagactcctccagttcggagaaggaa
acaaaacgatccaagaaaactgaacccgctaaagagcgtgctacttcaccagacggaaca
aagagcaggaaagctgaggagaaagtaataaaaacaaagcacgaagaagtaaaatccaag
tctcgggacgatactgaaaagaaagctaagaaacgtgagaaagaggaatcttcatctgac
agtgaccaggtgtcgaaaaagaaggcaagaaagaaggtttccgagtccgattctgagtct
gacagtgatgagcctaaaaagtctaaaaaagctaaaaaacacaagaagcactcgaaaaag
cataagaaacataaaaagcataagaaagcttctaaaaagaaggatgactcttctgacagt
gaagaagccgaggaggaggaagagggaaaagtgaataacgaagatttggaaaagaagctt
cgcgaaagagcattgaaatcaatgaaaaaacaaactagtgcatctgggtctgactag
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