Trichoplusia ni (cabbage looper): 113502325
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Entry
113502325 CDS
T05757
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04382
Cornified envelope formation
tnl04512
ECM-receptor interaction
tnl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113502325
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113502325
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113502325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tnl04147
]
113502325
00536 Glycosaminoglycan binding proteins [BR:
tnl00536
]
113502325
Exosome [BR:
tnl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113502325
Glycosaminoglycan binding proteins [BR:
tnl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113502325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113502325
NCBI-ProteinID:
XP_026739651
UniProt:
A0A7E5WHL6
LinkDB
All DBs
Position
17:complement(1921883..1949577)
Genome browser
AA seq
2128 aa
AA seq
DB search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NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atggggccgggaactttattttattttttggccgcactggcatttacacaagccagtgag
gatgtaccaaagaagccagtgaaagatgactcattagtattagaagatgcgagagcagcc
cggcagtatggtccttggcagggtcaaccgggtcaaccggacaacgaagtagtcgtagac
atcgaagatgaagaaaagaaacagtattatgaaaccaactatgacacaagcgcatacggt
ttcggttacgacgttggccctaacggacagttccaccacgagaaccgcggtccggatgga
gtcacgtacggttgctatggttacgtcgaccccgaaggctacctccgcgccactcactac
gttgctgacagccacggatacagagtagtggagccagagaagcccgtcgaagtgttccca
gatgaaaaatacgagtacgatgaagcaactgatggacaagcagtagacacgaaaccaggc
caagttattccgtggaagaagctatacttccccaaaggatgtggtcgtacacctggtggt
gttccagccaagcccctacctaaacccactccgaaaccgaaaccaccacgccctgtagac
agtactggccagggtagcattgttaagccagttcaaactggacccaatggacctggagga
tcatggcaaggcaccccgggcactcccggatctcctggcacacccggcacacccggcact
cctggctctcccggtactcccggctctcctggctcgcctggcggaccaggtggtccagga
ggcccaggtggcccgaacggtcccacgactggtggatactacccaggacaaccaggcagc
ccagacagcccaggtagccccggcagcccaggaggacccggaggacccggaggcccagga
ggcccagggggtccaggtggacctggtagtacagattatcctagcggaccctcaggtgga
gtttaccccggacaacctggcacgccgggcagccccggcagcccaggatcaccaggcact
ccgggaggaccaggaggcccaggaggaccaggaggtccaggtggacccggtagtatagat
tacccgactggaccctcaggtggactttaccccggacaacctggcacgcccggcagcccc
ggcagcccaggatcaccaggcaccccggggggaccaggaggtccaggaggtcctggtggc
ccaggaggcccaggtggacctggcagcatagactatcctagcggaccctcaggaggagtc
taccccggacaacccggcacccccggtagcccaggcagtccgggatcaccaggaacacca
ggaggaccgggaggaccaggtggcccaggtggcccaggtggacctggcagtacagattat
cctaacggacccgcaggaggcgaacagtatccaggacaagttgggacgcccggcagccca
ggcagtccaggatcacctggcagcccaggaggaccaggaggtccaggaggcccaggaggt
cctggaggcccaggaggaccaagttaccccggaaatccgggactaccgtccagaccagga
caaccaggatacccaggtcaacccggacaacccgctacaccaggacaaccaggataccca
ggacagcccggcacatcaggacacccagggcagcctggaaaacccggtacaccaggacag
ccaggtttacctggtgaaccaagtcagcccgggcaacccggcacgccaggatacccagga
cagcccggacaaccaggatacccagggcagcccggacaaccaggatacccaggacagccc
ggacaaccaggatacccaggacagcctggacaaccaggatacccaggacagcccggacaa
ccaggatacccaggacagcctggacaaccaggatacccaggacagcctggacaaccagga
tacccaggacagcccggacaaccaggatatccaggacagcccggacaaccaggataccca
ggacagcccgcacaacccggtacgccaggttatccaggacaacccggtaaaccaggacag
attggggaaccaggtcagcccgggcaacctggcacaccaggaaagcccggacaatctggc
acgccaggaaagcccggacaaccaggatacccaggacagcccggacaaccgggataccca
ggacagcccgggcacccaggatacccaggacagcctggacaaccaggttaccccggagaa
ccaggtcaaccagggtcctctggacagcctgggcaaccaggcacaccaggacagccagga
caacctggatacccaggacagcctggacagccaggataccctggacagcccggacaacca
ggaaagccaggacagcctggacagccgggataccctggccaaccaggataccccggacag
cctggacaaacgggacaaccgagtaagccagtacagcccggtcaacaaggaggacccggt
gagccaggataccctggacaaccaggacagccaggatacccgggacaacctggacagcca
ggatacccaggacagcctggacaacccggacacccaggagagcctggacagccaggatac
ccaggacagcctggacaacccggacacccaggagagcctggacagccaggatacccagga
cagcctggacagccaggataccccggacaacccggacacccaggacaacccggtcaccca
ggacaaccaggacagccaggatacccaggacagcctggacaacccggacacccaggagag
cctggacagccaggatacccaggacagcctggacagccaggataccccggacaacccgga
cacccaggacaaccaggacaaccaggacaacctggtcacccaggacaaccaggcaaacca
ggacaacctggacagccaggacagcccggccaacctggatatccaggacagcccggacaa
ccaggcaagccaggacaacctggtcagccaggataccccggccaaccaggacaaccaggc
aaaccaggacaacctggacagccaggataccccggacagccaggacagcctggtcaacaa
ggaggccctggtgagccaggataccccggacaaccaggtgaaccaggctaccccggacaa
cccggttacccaggacagcccggacagccaggatatcccggacaacctggacagccagga
tatcccggacaaccaggacagccaggccaaccaggcaaaccaggacaacctggatacccc
ggacagccgggagagcccggacaacccggtcaacaaggaggccccggtgagccaggatac
cccggacaaccaggccaaccaggctacccaggacaacctggacagccaggacaatcagga
cagcaaggcctaccaggcaaaccagggcaacctggacagccaggccagccaggataccct
ggacagcctggacaaccaggataccctggacagcctggacaaccaggctacccaggacag
ccaggcaagccaggacagcctggatcccccggacaacaaggacaacccggctacccagga
cagcccggacaacccggcaagccaggacagcctggataccccggacaacccggctaccca
ggacagcccggacaacccggcaagccaggacaacccggatacccagggcaaccaggacag
caaggccaaccaggcaaaccaggacaacctggataccctggacagccgggacaaccagga
caacctggacagcccggtcaacaaggaggccccggtgagccaggttaccccggacagccc
gggcaaccaggcaagccaggccagcccggacaaccaggacaaccaggacaacccggatac
ccagggcaaccaggacagcaaggccaaccaggcaaaccaggacaacctggataccctgga
cagccgggacaaccaggacaacctggacagtcaggataccccggacaaccaggacagcca
ggccaaccaggcactccaggacaacctggataccctggacagccgggacaaccaggacag
ccaggacagcccggtcaacaaggaggccccggtgagccaggttaccccggacagcccggg
caaccaggcaagccaggccagcccggacaaccaggacaacccggatacccagggcaacca
ggacaacaaggccaaccaggcaaaccaggacaacctggataccctggacagccgggacaa
ccaggacaacctggacagccaggataccccggacagccaggacagcccggtcaacaagga
ggccctggtgagccaggatacccaggacaacctggacaaccaggcaaaccaggacaacct
ggacaaccaggcaaaccaggacaacctggacagccaggatatcccggacaaccaggacag
ccaggccaaccaggcacaccaggacaaccaggatatcccggacaaccaggacagccagga
aagcccggtcaacaaggaggccccggtgagccaggttaccccggacagcctggacaacca
ggcaaaccaggacaaccaggatatcccggacaaccaggacagccaggccaaccaggcaca
ccaggacaacctggataccctggacagcccggacaaccaggacaacccggatacccagga
caatcaggacaaccaggcaaacccggacaacctggataccctggacagccgggacaacca
ggacaacctggacagccaggataccccggacaaccaggacagaccggtcaacaaggaggc
tccggtgagccaggataccctggacagcccggagaaccaggacaccccggatacccagga
caatcaggacaaccaggaaaacccggacaacctggataccctggacagccgggacaacca
ggacagccaggacagcccggtcaacaaggaggccccggtgagccaggttaccccggacag
cccgggcaaccaggcaagccaggccagcccggacaaccaggacaacccggatatccaggg
caaccaggacagcaaggccaaccaggcaaaccaggacaacctggataccctggacagccg
ggactaccaggacagcccggtcaacaaggaggccccggtgagccaggttaccccggacag
cccgggcaaccaggcaagccaggccagcccggacaaccaggacaacccggatacccaggg
caaccaggacagcaaggccaaccaggcaaaccaggacgacctggacagccaggatatccc
ggacaaccaggacagctaggccaaccaggcaaaccaggacaacctggataccctggacag
ccgggacaaccaggacaacctggacagcccggtcaacaaggaggccccggtgagccagga
taccctggacagcccggagaaccaggacaacccggatatccaggacaatcaggacaacca
ggcaaacccggacaacctggataccctggacagccgggacaaccaggacagcccggtcaa
caaggaggccccggtgagccaggataccctgcacagcccggacaaccaggacaaccaggc
aaaccaggacaacctggacagccaggatatcccggacaaccaggagagccaggccaacca
ggcaaaccaggacaacctggataccccggacagcccggacaaccaggacatccaggcaaa
ccaggacaacctggacagccaggataccccggacaaccaggaatgccaggacaacctgga
cagcctggataccccggacaacctggatacccaggacagcccggacaaccaggacagcaa
ggtcaaccagggtacccaggacaatacccagattctgaaggcgcaccaacgggcactggt
gtgcagccgcctgcgactgtgccatctggacaaatgccaccgttccctatctacgttatc
ccgtatccactacccattgttccaagccctggatcatgtccatgctatctacttaaccca
ggacaaaacggaacaacaacacaaggtcaggtttctccgccacccaactatcaaaatcaa
ccacagtatgctccttacggtattattgggttcgtcccagtagtattcatgccatactgc
ccaggtaacggctcaaccatgaatagcgctcaacagaacttccccaatgcagttccgatg
caatacaactgcgctcaatgccaagccaacagtgacatttacagatatcttggcagacaa
agcggaggacgtagcacaggtttcaaagatctcaaagaaataaaatccctctccgaatta
gaggacctattaagaaatcaaatcaaaccgttaaaaaagagcgttcgcacaataggcgct
aacccacgaatactagacgatccgaaaacagagaacgataagtcagaaaagaaaaatgcc
aagaaaactgaaaaaaacaagcagtaa
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