Trichoplusia ni (cabbage looper): 113502731
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Entry
113502731 CDS
T05757
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113502731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113502731
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113502731
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
113502731
NCBI-ProteinID:
XP_026740192
UniProt:
A0A7E5WIN8
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Position
17:complement(8111251..8124406)
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AA seq
727 aa
AA seq
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MTTEQENTEIDWGNERLSRAQRAVEANTYDVDSWSLLIREAQTRPINEVRVMYEKLITAF
PTTGRYWKIFIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEK
MAQAYDFALDKIGLDIHAYPIWNDYITFLKSVEAVGSYAENQKISAVRKVYQRAVITPII
GIETLWKDYIAFEQSINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPPTA
DREEMKQVELWKKYITWERSNPLRSEDTALVARRVMFAIEQGLLCLAHHPDVWHQAAQFL
DHSAKLLQEKGDSNAARLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVHQ
VYTRYLDMEDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSRYHVFVAAALMEYY
CSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLKPESS
VDIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCSIA
ELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDTSQMIPYKP
KVNPLPGEHPIPGGSFPMPAAAAHVCTLMPPPSCFRGPFVAVDRLMQLFNRISLPDKPPA
PTQENGCDTKLFDLARSVHWIVDDDGITTVASKARRRKIGEDSDDDELGVAPPVNDIYRQ
RQQKRVK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgagcaagaaaatacggaaattgactggggaaatgagcggctgagtagagct
caaagagcagttgaagccaacacttacgatgtggattcttggtcgctcctcatccgtgag
gcccaaacaaggcccatcaatgaagtacgagtcatgtacgagaagttaataaccgcattc
ccgaccacgggacggtactggaagatatttatagagcaagagatgaaggctagaaatttc
gaaagagttgaaaagctgttccagagatgtctcatgaagatcctgaacattgagctgtgg
aggctgtatctcaactatgtgaaggagaccaagtgtatgctgcctacttacaaggagaaa
atggcccaagcctacgacttcgcgctggataaaattggtctggacatccacgcgtacccg
atatggaacgactacatcaccttcctcaagagtgtggaggcagtcggctcctacgctgag
aaccagaagatttctgctgtcaggaaggtatatcaaagagcggttataacgcccattata
ggtatagaaacactatggaaagattacattgcttttgagcaaagtattaacactattatt
gctgagcgtatggcgatggaacgctcccgagagtatatgaacgctcgtcgcgttgccaaa
gagttggagacggtcactcgagggttgaacaggaacatgccagcaacaccaccgactgca
gatagagaggagatgaagcaggtggaactatggaagaagtacataacgtgggagcgttcg
aaccctctccggtctgaggacacggcgctggtggcccgccgcgtgatgttcgccatcgag
cagggcctgctgtgtctggctcatcaccccgacgtgtggcaccaggccgcgcagttcctc
gatcactccgccaagctgctgcaggagaagggggactcgaacgcggcccgcctgttctcg
gacgaagcggccgcggtgtacgagcgcgcgaccagcggccctctcaaacactccactttg
ttacacttcgcgcacgccgactacgaggagagcaggcttcattataacaaggtacaccaa
gtgtacacccgctacttagacatggaggatatcgacccgacgctcgcctacgtgcagtac
atgaagttcgcgcgcagggctgagggcatcaagtcagccaggactgtcttcaagagggcc
agagaggatcctagatctcgctaccacgtcttcgtggccgcggccctcatggagtactac
tgctccaaagacaagaacattgccttcaggatatttgagttgggccttaaaaagttctct
cacatacctgaatatgtactctgctatatcgattacctgtcgcatttgaatgaggacaac
aacactcgcgtcctattcgagcgagtcctctcctctggcagtctgaagcccgagagctcc
gtggacatctggaacaggttcctggagttcgagtccaacataggagacctggtcagcatc
gtcaaggtcgagaagagaagacaggccgtgctggagaagatcaaagagttcgaaggcaag
gagacggcgcagctggtggacagatacaagttcctggacctgtacccctgcagcatcgcg
gagctcaagtccatcgggtacacggaggtagcatccatgtccaacaagtcgtgggcgctg
ggaggtccattagctggcatatcgccagagctagccgccgtcatactgggacagaaggat
aacgatcccaacaaggacatagcaagacctgacacgagtcagatgataccgtacaagcct
aaggtcaatcccttgcccggagaacatcctataccaggcggctcgttcccgatgccggcg
gcggcggcgcacgtgtgcacgctgatgccgccgccgtcgtgcttccgcgggcccttcgtg
gccgtcgaccgcctcatgcagctcttcaacaggatctcactgcccgacaaaccgccagcc
cccacgcaggagaacggctgcgacacgaagctgttcgacctggcgcgctctgtgcactgg
atcgtggacgacgacgggatcaccactgtggccagcaaggcacgtcgacggaaaatcggc
gaggactcggatgacgacgaactgggagtagcgccgcccgtcaacgacatctaccggcag
agacagcagaaacgcgtcaagtga
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