Trichoplusia ni (cabbage looper): 113502798
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Entry
113502798 CDS
T05757
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113502798
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Other 90S particles
113502798
Pre-60S particles
Other pre-60S particles
113502798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
113502798
NCBI-ProteinID:
XP_026740295
UniProt:
A0A7E5WHR7
LinkDB
All DBs
Position
18:7668775..7681817
Genome browser
AA seq
1374 aa
AA seq
DB search
MGKFRSKLKGKSKGKRWQKGQSSNSNPKIQKYRDMAKSRFFQENLGSTGLTQQAVLKHDA
MMTYSHASNKNKSEAENELSIAKELENMSMKSTDDVSESEYSGSMRPSTYKTFQTFASDW
SQCSNLSFSKLLNKFDSNNAHHKEMLAVLAAVTEVIKEQGGKESTTEYFIALMEALKAAE
VEDNLVATLTLLSMGIKAVPQAVLRKQFSDSATIFTDILIKNEQSENGTLLRGALGCLSV
LLRAQEYALWGDSSTMRVFESVLAFTLHSKPKVRKAAQHAVTSVLRGSCFMIPSDDQKNK
VPKVHPGSNRVAEYCLSQIKAEALLAGHRTVLHTLTMLRDVLPVFSKDFIKSICEAILSL
MTHNNVYIKTCCLHTLHALFSNNKDSSNMTASLAVQLTRALMAARPPANDTGQVLAWAAV
LQQAYASLANLDLNLCLPNLPAFVNICVSELWLSDVADINSASTNALKAVLLDCVKLAIE
SDEVYLKHKVHIEAVFKSIGTGLDNPFNQAIRHVILTIAVCFEIGNEKVANILGPLLRKL
NDRRESHNFDNDKEVEYATGCAIKALGPEFVLRIIPLRDGGETINLERSWLLPVLKDKIT
HSNLKYFATEILEMATFCRKKSRELTQTKDVALSHTYELLCNQFWALLPSFCNNPKDIKD
NFKSIARVLGSVLKDNPEFRLSVMQALRKLISCSADSEDDKLELGRFAKNYLPILLNIYM
SPVKGSSAEGQRLAALETIQVYLTISDQTLREELFSNALQQLEGSKDNHFQRESILNVIR
ALVLYQSSETIAKLFEDWIYPLSETVLEDPKKNKRAKKENQEENGEKKNELRYKEKVKLL
EMEHKKAYRILEEIFKSENESCKQFLKDNYKKIKKLLMTSLHKAADSSKAARLRCIEHLI
NTTPFLNAESKLLKSAIAESVICTKDINSKCRQCAFNLISSVGNVLKAQDGGMQAFVNML
SSGLSAPLPRIVAATLRAIASALFNYSEDMGLETVQGLLETVSEQMTNTNREIIAACLSF
LKVYTKVLPTDVLAGSLPVIFKSLSGMAEDCKRHSRKEIGYFLTRMIRKFGADTVEKLIP
PADEVMLRRLRNIRKFENRKKKLKENRRDQSDNDSDSDMQIKGTSKTLEDILKDSDSEME
FLDDDEEERPRQKVKTKTAKKAKTQAWIQDDPDNIVDLADVSASRKITATDPSRKQKATE
IKAQKKKDGGFKTAPDGRLIITDDVDGDDDDDEPRPSGDIDTDTDDTDAEEEDTKPSKLL
KPGAKRRYDDILSMKSGKSGRSRASTVTVGSKYKAGGKGIHRPLGSAASVASGVGSEYKS
KKARGDIKKQGKHDPYAYLPLSRKNLNKRKKAVTSKQFKGIVKSKTKGGRIKKK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggggaaattcagatcaaaactaaaaggcaaaagtaaggggaaacgatggcagaagggc
caatcctcgaattccaacccaaagatccagaagtaccgggatatggcaaaatcccgattc
tttcaagaaaatttaggtagcactgggttaacccagcaggcagtgcttaaacatgatgct
atgatgacatacagccatgcatcaaacaaaaataagtctgaggcagaaaatgagctgtcg
attgctaaggagttggagaatatgtctatgaagagcactgatgatgtgtcagagagtgaa
tattctggatctatgagacccagcacttataaaacatttcagacattcgcttccgattgg
agtcagtgctccaaccttagctttagcaagctcttgaataagtttgactcaaacaatgca
catcataaggagatgcttgctgtgttggctgcagtcactgaagttataaaggaacagggc
ggcaaggaatctactactgagtacttcatagcattgatggaagccctgaaggccgctgaa
gtcgaagacaatctagtggcaacactaacacttctctccatgggtataaaggcagtaccg
caagcagtcttaaggaaacagttctctgactcggcaacaatatttactgatattctcatc
aaaaacgaacagagtgagaatgggacactgttgaggggtgccctagggtgtctatcagtg
ttactgagagcccaggagtatgcattatggggtgattcatctaccatgagagtttttgaa
tcggtcctagcctttacattacattctaagccaaaggtacggaaagcggctcagcatgct
gtcacatctgtgttacgcggaagctgtttcatgataccttctgatgatcaaaagaataaa
gtaccgaaagtacacccgggttcgaatcgcgtggcggagtactgcttgtcgcagatcaag
gccgaggcgttgttagcgggacaccggacagtgttgcacactctcaccatgctcagagat
gtgttgccagtcttcagcaaggattttattaagtcaatctgcgaggccatcctctcgcta
atgacgcacaacaacgtgtacatcaagacgtgttgcctgcacaccctccacgcgctgttc
tccaacaacaaggacagcagcaacatgacggcgtcgctcgctgtgcagctgacgcgcgcg
ctgatggcggccagaccccccgctaacgataccggacaggtgttggcctgggccgccgtc
ttgcagcaggcgtatgcctcgcttgctaacttagacttaaacctgtgcctgcccaatctg
ccggcgtttgtcaacatctgtgtcagtgagctgtggctatctgatgtggctgacatcaac
tctgcctctaccaatgcactgaaggccgtcctgcttgattgtgtgaagctggccatagaa
tcggatgaggtttacctgaagcacaaggtgcacatcgaggcggtgttcaagagcatcgga
accggcctcgacaaccccttcaaccaagccatcagacatgttatactcaccatcgctgtg
tgttttgagatcggaaacgaaaaagtagcaaacatactcggtcctctcctaagaaaactg
aacgaccgccgcgaaagccacaactttgacaacgacaaagaagtagaatacgccacaggc
tgcgctatcaaggcactaggaccagaattcgtcctcagaatcatacccttaagggacgga
ggcgaaacaatcaacttggaacgaagctggctactccccgtcctcaaagacaagatcaca
cactcaaacttaaaatacttcgcaacagaaatattagaaatggcaacattctgcagaaaa
aaatctcgagaactcacgcaaacaaaggatgttgccctatcacacacttatgaactactc
tgcaatcaattctgggctctcctaccttcattttgcaataatccgaaagatatcaaagac
aatttcaagtctattgctagagtgttaggtagtgttttaaaagataatccggagttcaga
ttgtctgtgatgcaggctcttaggaagttaatcagctgttcggctgacagtgaggatgat
aagttagaattgggaagattcgcgaagaactatttgcctatattattgaatatttatatg
tctccggttaaaggaagtagtgctgaaggacaaaggctagcggctcttgaaactatacag
gtatacctaactataagcgaccaaacgcttagagaagagttgttctcgaacgctctccaa
cagttggaaggctcgaaggacaaccatttccaaagggaatccatcctaaacgtgatcaga
gccctagtcctataccaaagcagtgaaacaatagcaaagttattcgaagattggatatac
ccgctcagcgaaactgtcctagaagaccccaagaagaacaaaagagctaaaaaggagaat
caagaagagaacggagagaaaaagaacgaattacggtataaagagaaggtcaaactactg
gaaatggaacataagaaggcttatagaatattggaggagatttttaagagtgagaatgaa
agctgtaaacagtttttgaaagataactataagaagattaagaagttgttgatgacgtcg
ttgcataaggctgcggatagcagcaaggcggctagattacgatgtatagaacacctaata
aacacgacgccattcctgaacgctgaaagcaagctactgaagagtgcgattgccgaatca
gtgatatgtacaaaggacatcaactcgaagtgtcggcaatgcgctttcaaccttatttct
agtgttggtaacgtgttgaaggcgcaagacggaggtatgcaagccttcgtaaacatgctg
tcatcaggtctatctgcccctctcccacgtattgtagcggccacactgcgggctatagca
tcagccctattcaactactccgaggacatgggcttggagacagtgcaaggcttgctagag
acagtctccgaacagatgacgaataccaatagagagattatagcggcttgtcttagcttc
ttgaaggtatacacaaaagttctgccaacagatgtcctagcgggcagtctgcctgtaatc
ttcaaatctctatcgggtatggctgaagactgcaagaggcattctcgaaaggaaataggc
tacttcctcactcgcatgataaggaaattcggtgctgatactgtggagaaactcataccg
cccgctgatgaggtcatgctgcgaagacttaggaatatcaggaagtttgagaacaggaag
aagaaactgaaggagaatagaagagaccaatcagacaacgactcagactcggatatgcaa
atcaaaggcacctcaaaaaccttggaggacatccttaaagactccgactcggagatggag
tttctggatgatgatgaagaggaaaggccgaggcagaaggtcaagaccaagactgccaag
aaggctaagactcaagcctggattcaggacgaccctgataacattgtggacttggctgat
gtgtcggctagcagaaagattacagctacggacccctcccgaaaacagaaggcaacagaa
atcaaagcgcagaagaagaaggatggcggtttcaagacggcgccggatggtcggctgatc
atcactgatgatgtagacggtgacgatgatgatgatgagccgagacccagcggagacatt
gacaccgatactgatgataccgacgctgaagaagaagataccaaaccctcgaagctcctg
aagccgggcgccaagcgtcgctacgacgacatcctgagtatgaagagcgggaagtcgggc
cgcagcagagcgtccaccgtcacagtggggtccaagtacaaggcgggcgggaagggtata
cacaggcctctcggctcagcggcctccgtcgcatcaggtgtcggctctgaatacaagtcg
aagaaggctcgaggtgacatcaagaagcaaggcaaacacgatccctacgcatatctaccg
ctatctaggaagaatttaaataagaggaaaaaggcagtaacctcgaaacaattcaaaggc
atcgtcaaatcgaaaactaaaggaggcagaattaagaagaaataa
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