Trichoplusia ni (cabbage looper): 113503328
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Entry
113503328 CDS
T05757
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113503328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113503328
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113503328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
113503328
NCBI-ProteinID:
XP_026740988
UniProt:
A0A7E5WJW4
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All DBs
Position
19:6934476..6958316
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AA seq
528 aa
AA seq
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MRMNPDMDDDEKGPRKLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGF
VTFAEPALVNVVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETD
LRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRA
EPRDGSGKLGSGASGMGGGALSAPGDAPQAGQWGPPAAAPINMIQGHNGQMGGPPINMPM
AGPNIMQGYQGWGTSPGQTSYAGYGAAGAGAGPGNYQGWGAPPAPQAPPHAPAWPATNNY
TQHTQPPAQGYGSYANYSSAPAGASAGGSWTNWNMPQNSNSTGSGSYVPLSEGGEMYGRG
GAGGAGAGGPALTGALSSAALSKSSSADYSTYQQYPPAYQQDQGSSYGGGASRYGAATEY
HASAPPGAQPPEGDGVGSNAGSPKYVNVPQMSDAIGTPPQVPMMYCGGMVSPQPSFCNVS
DISASVSGDDYEYTGGSGDGYQRSSKRSYHGSSSGGTASATSYHPYRR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgaatccagacatggacgatgatgagaagggacccagaaaactgttcgtcggt
ggtctgtcatgggagacgtctcaggagaacttgcagcgttacttttcgcggtatggtgat
gtcatcgactgcgtcgtgatgaagaacagcgagtcgggccgctctaggggcttcggtttc
gtcacctttgctgaaccggcgcttgtcaacgttgtgctgcagaatgggccccatcagctt
gatggcaggaccattgacccgaaaccgtgcaaccctcgcacactgcagaagccaaagcgt
ggcggcggatacccgaaggtgttcctcggtgggcttccatctaacgttaccgagaccgac
ttgcgagtgttcttcggccgctacggcaaggtcatggaagtcgtcatcatgtacgaccag
gagaagaagaagtctagaggcttcggtttcctgtcgtttgaagatgaaatctctgttgag
agagtcacccaagagcatttcatcaatctgaacggcaagcaggtggagatcaagcgtgcc
gagcctcgcgacggctcgggcaagctcgggtcgggcgccagcggcatgggcggcggagcc
ctcagcgcacccggcgacgcgccgcaggccggccagtgggggccgcccgccgccgcgccc
atcaacatgatccagggccataacggccagatgggtggcccgcccatcaatatgccgatg
gctggccccaacatcatgcaggggtaccagggctggggcacgtcccccgggcagacgtcg
tacgcgggctacggcgcggcgggcgcgggcgcgggcccgggcaactaccagggctggggc
gcgccccccgccccgcaggcgccgccgcacgcgcccgcctggcccgccaccaacaactac
acgcagcacacgcagccgcccgcgcagggctacggcagctacgctaactacagctctgcg
ccggcgggcgcgtcggccggcggcagctggaccaactggaacatgccgcagaactccaac
tctaccggctccggttcgtacgtgccgctgtcggagggcggcgagatgtacgggcgcggc
ggcgcgggaggcgcgggcgcgggcggccccgcgctcacgggcgcgctgtcgtccgcggcg
ctgagcaagtcctcgtctgccgactactccacgtaccagcagtacccgcccgcctaccag
caggaccagggctcgtcgtacggcggcggcgcgtcgcggtacggcgccgccaccgagtac
cacgcctccgcgccgcccggcgcgcagccgccagagggcgacggtgtgggcagtaacgcg
ggcagtcccaagtatgtgaacgtcccacagatgtccgacgcaataggaacgcccccgcag
gtgcctatgatgtattgcggaggcatggtgtcgccacagccgtccttttgcaatgtctcc
gacatatctgcgtctgtttcaggtgatgactatgaatacactggtgggtccggcgacggt
taccaacggtcatcgaagcgcagctaccacggctcatcgtcaggcggcactgcctccgct
acttcctaccatccctatcggcgttaa
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