Trichoplusia ni (cabbage looper): 113503345
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Entry
113503345 CDS
T05757
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113503345
Membrane trafficking [BR:
tnl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
113503345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_EML_2
p72_C
Motif
Other DBs
NCBI-GeneID:
113503345
NCBI-ProteinID:
XP_026741038
UniProt:
A0A7E5WK07
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All DBs
Position
2:complement(2712920..2744980)
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AA seq
1418 aa
AA seq
DB search
MYFPIGWPKVLKNLGADNQIIRQIVSNRDKILFASLSDDSFAVWFCKPTVPIVYHKRSTE
SLQRLGVNVGVEWKPDSSMICISTSEGHLILYNVEAHSEHTAYQQYDPPTASLRRDSAEL
FVKEVIPSLKITQFKEVLVWDGQITRMCCISGTEILVCTTRAHLLRYRWDGTQNRDYCLD
LGRIPFSINQQVSKAEPILEDNTHVNDIEYSPLVCGFGITLNDGRAAYLTAPNLKFDPNA
VQGIWAPGIDDATCARVNHKFRLIAIGRKNSQVDVFTIDEATGGLELSHTMVLSSKDFPG
DPGPVKCVRWTADGRAVAVSWERGGVSAWSTFGALLLCSLAWDYGLSQDRASHNPLVVSS
LEWATEGYQLWMVKVEGDSSTNIIQLDFVKSPLSVNPCMSNQRHLYLQADDKLYVNLEDN
LTKRTKISIIDSSADVYQSENGLTDQPNLEYESSTKYREFVDDNECRKQWIVLPLPATYI
ATNWPLRYSAIDESGMNVCVAGRAGLALYSCAARRWKLFGNEAQEKDFVVAGGMLWWRHC
VVVGCYSILDGHDEIRFYPREAKLDNKFAKIVRVQSQVFVLDILDDQLVVFGADALVTIY
ELNCNDDTGDISLRCVQAVDVSALSHPACVVSASLCRLQEPPRARAAAATLQLQQRQPDS
LVINASGKLMMVQREEYDVDEDNNPAYSCLPATVLASCVESVWSCGSVSGSQTQLSRALW
LWCGALGARVWLPLLPRDATRHPDSGRHTFMAKRIMLPFHLNIYPLTILFDDAILLGAEN
DTTLYASDSNSVFSLPFCVVNRTSQVYLHQILRQLLRRNLGYHAWEIARSCSQLAYFPHS
LELLLHEVLEEEATSKEPIPDAQLPSIIEFVHEFPVYLQTVVQCARKTEIALWAYLFSAA
GKPKELFQECLQRKMLDTAASYLIILQNLESSTVSRQLATQLLDTALQQERWDLARDLVR
FLRAIDPNDVDSPRNSVNVQAKYGQVVQSQTVSPNAEDLSVILGTMQLAGGRGRSFSTTV
SPREPSPPAGAPAPPAPPPHAPPARATAAVKRKKSVPARADRDSYSGTAEEFFIDMMIQR
HARLLLSTARLHALGKMAASLDLHLVAWLAGERERAARVDNAVLCVKRIHEDFAWPYPVV
NDAEQYLQRKGSTVTSSYTPSAESDSLCGDSGYMSLPLRAALPLMSGAVPVSPGPVSSAG
EGSVAEGGGVAWGGEAGGAGEERRYAALMERLHHHQAERGDHTAHVQLRYYLQLMTEASC
VEWALVVAVVLRDALAVLRTTNAARGADVSLPAVRRLRQALQDICAWTDADCLGYKPFMM
AISNQIPFLTSIINSRERRLSMSKTRVRTSSTSSLGQEPKPKPQATETKLPAPQKAEVAK
QTGRKDSGASEPPPSVVTQPPRPPPPRRDETTTGCSLM
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtattttccaattggctggcccaaagttctgaaaaatctgggtgcagataatcaaatt
ataagacagatcgtatcaaatcgagacaaaatattgtttgcttcattgagtgatgacagt
tttgctgtatggttttgcaagcccaccgttccaattgtatatcacaagaggagtacagaa
tctcttcagagactaggcgtcaatgttggagtggaatggaagccagactcgtccatgata
tgtatttctacatcggaaggccacctaattctctacaatgtagaagcccacagcgagcac
acagcataccagcagtatgacccgcccaccgccagcctacgcagggactcggctgagttg
tttgtcaaggaagtcattccctcacttaagatcacacagttcaaagaggttttagtatgg
gacggtcagatcacgcgcatgtgctgcatatcgggcacggagatcctggtgtgcacgacg
cgcgcgcacctgctgcgctaccgctgggacgggacgcagaaccgcgactactgcctcgac
ctcggcaggatacccttctcgataaaccaacaggtttctaaagccgagccgattctagag
gataatactcacgtcaatgacattgagtactcgccattggtgtgcggcttcggcatcaca
ctgaacgacggacgggcggcctacctcactgcacccaacctgaaatttgatccgaacgca
gtgcaaggcatatgggcgcccggtatcgacgacgcgacctgtgcgcgagttaatcacaag
tttaggttaattgctattggcaggaaaaattcacaagtggatgtgttcacgatagacgaa
gctaccggtggcttggaactgtcacatacaatggttctcagctccaaagacttccccggt
gatccgggacctgttaaatgtgtgagatggacggcggacggtcgcgcggtggcggtgagc
tgggagcgcggcggcgtgtcggcctggagcacgttcggcgcgctgctgctgtgctcgctg
gcctgggactacggcctcagccaggaccgcgccagccacaacccgctcgttgtgtccagt
ctggaatgggccacagaaggataccaattatggatggtgaaagtagaaggagattctagt
acgaatataattcaattggactttgtcaaaagtccacttagtgtaaacccttgcatgagc
aaccagaggcacctatatcttcaggccgacgacaaactctacgtcaatctagaagataac
ttaacgaaacgaactaagatatccatcatagactcatcagctgacgtctaccagtcagag
aacggtctgaccgaccagcctaacttggaatacgagagcagtactaaatacagggagttt
gttgatgataacgagtgcaggaaacaatggatcgtgttgccgttaccagctacttatatt
gcgacgaattggcctttaaggtacagcgccatcgacgagtcgggcatgaacgtgtgcgtg
gcggggcgcgcggggctggcgctgtactcgtgcgcggcgcggcgctggaagctgttcggc
aacgaggcgcaggagaaggacttcgtggtggccggcggcatgctgtggtggcgccactgt
gtggtcgtgggttgctacagcatcctagacggtcacgacgagatccgcttctatccccga
gaggcgaagctcgacaacaagttcgcgaagatagtccgcgtgcagtcgcaggtgttcgtg
ctggacatcttggacgaccagctggtcgtgttcggggccgacgcgctcgtcaccatatac
gagctgaactgcaatgacgacacgggcgacatctcgctgcgctgcgtgcaggcggtggac
gtgtcggcgctgtcgcaccccgcgtgcgtggtgtcggcgtcgctgtgccgcctgcaggag
ccgccgcgcgcgcgcgccgccgccgccacgctgcagctgcagcagcgccagcccgactcg
ctggtgattaacgcaagcggtaaactgatgatggtacaaagagaagagtatgacgtcgac
gaagacaacaacccggcatacagctgtctcccagccacggtcctcgcgtcgtgcgtggag
agcgtctggtcttgcggcagcgtgtccggctcacagacgcagctctcgcgcgccctctgg
ctgtggtgtggggcgctcggcgcgcgggtctggctcccgctgctgccgcgcgacgctacc
aggcatccagactcggggagacatacgttcatggcgaaacggattatgttgccgttccat
cttaatatttatccgttaacgatattatttgacgatgccattctgctgggcgctgagaac
gacacaactctctacgcgtcagattctaattctgtcttctcattgccgttctgtgtcgtt
aatagaactagtcaagtatacctccaccaaatcctacggcagttactccgtcgtaacttg
ggctaccacgcgtgggagatcgctcggtcgtgctcgcagctcgcgtacttcccgcactcc
ttggaactgctgctacatgaggtgctggaggaggaggcgactagcaaggagcccatacct
gatgcccagctcccgtcgatcatcgagttcgtgcacgagttccccgtgtatttacagact
gtagtacagtgcgcaaggaagacggagatagcgctatgggcgtacttgttctcggcggcg
ggtaaaccaaaggagttattccaagaatgtttacaacggaagatgttggatactgcggcg
tcgtaccttattatattacagaacttggagagctcgacggtgagccggcagctagcgacg
caactcctggatacggcgctgcagcaggagcgctgggacctggccagagacctcgtcagg
tttctcagggctatagatcctaatgacgtcgattcaccaagaaattcagtgaatgtccaa
gcaaagtacggtcaagtggtacagtcgcagacagtcagccccaacgcagaggatttgtca
gtaattcttggcacgatgcagctagcaggcgggcgcgggcgcagcttcagcacgacggtg
tcgccgcgcgagccgtccccgcccgcgggcgcgcccgcgccccccgcgcccccgccgcac
gcgccccccgcgcgcgccaccgccgccgtcaagcggaagaagtccgtgcccgcccgggcc
gacagggactcgtacagcggcacggcggaggagttcttcatagacatgatgatccagcgt
cacgcccgcctgctgctgtccacggcccgcctgcacgcgctgggcaagatggcggcctcg
ctggacctgcacctggtggcctggctggcgggcgagcgggagcgggccgccagggttgac
aacgctgtgctctgcgtcaagaggatacacgaggacttcgcctggccctatcctgttgtc
aacgatgcggaacagtatctgcagaggaaaggaagcactgttacaagttcgtacacgccg
tctgcggagtcggacagcctgtgcggcgacagcggctacatgagcctgccgctgcgcgcc
gcgctgccgctcatgtccggggccgtgcccgtgtcgcccgggcccgtcagttcagcgggc
gagggcagcgtggcggagggcggcggcgtggcgtggggcggcgaggcgggcggcgcgggc
gaggagaggaggtacgcggccctcatggagcggctgcaccatcaccaggccgagcgcggg
gaccacaccgcgcacgtgcagctcaggtactacctgcagctgatgacggaggccagctgc
gtggagtgggcgctggtggtggcggtggtgctgcgcgacgcgctggccgtgctgcgcacc
accaacgcggcgcgcggcgcggacgtcagcctgcccgccgtgcgccgtctgcgccaggcg
ctgcaggacatctgcgcctggaccgacgccgactgcctcggctacaagccatttatgatg
gcgatcagcaaccaaatcccattcttaacatcaatcatcaactctcgcgaacgacgccta
tccatgtctaagacgcgagtgcggacttcaagtactagttcactaggccaggagccaaaa
cccaagccgcaggcgacagagacgaagttaccagcgccgcagaaggcagaggtggccaag
cagacggggaggaaggactcgggagcgtcggaacctccgccgtcagtggtcacacagcca
ccgcgaccgccgccgccgcgcagggatgagaccaccactggatgctcgctcatgtaa
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